IVF0021762 (gene) Melon (IVF77) v1

Overview
NameIVF0021762
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAmmonium transporter 1 member 1-like
Locationchr10: 17110569 .. 17110763 (-)
RNA-Seq ExpressionIVF0021762
SyntenyIVF0021762
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATCAATCATCCGCGGCTTTGTCGCCTCTGTCATACTAATAATTTGCAACCGAATTATGTAGAAGTGAAATACGATGATCCATTAGAAGCCACTCAACTCCACGGTGGGAGTGGCGCGCGGGAAGTGATCTTTACAACACTCTTTGCAACAGAGGTGTATGTAACAGGAGTGTATGGTGGATCGGGGTGA

mRNA sequence

ATGGACATCAATCATCCGCGGCTTTGTCGCCTCTGTCATACTAATAATTTGCAACCGAATTATGTAGAAGTGAAATACGATGATCCATTAGAAGCCACTCAACTCCACGGTGGGAGTGGCGCGCGGGAAGTGATCTTTACAACACTCTTTGCAACAGAGGTGTATGTAACAGGAGTGTATGGTGGATCGGGGTGA

Coding sequence (CDS)

ATGGACATCAATCATCCGCGGCTTTGTCGCCTCTGTCATACTAATAATTTGCAACCGAATTATGTAGAAGTGAAATACGATGATCCATTAGAAGCCACTCAACTCCACGGTGGGAGTGGCGCGCGGGAAGTGATCTTTACAACACTCTTTGCAACAGAGGTGTATGTAACAGGAGTGTATGGTGGATCGGGGTGA

Protein sequence

MDINHPRLCRLCHTNNLQPNYVEVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGSG
Homology
[Close]
BLAST of IVF0021762 vs. ExPASy Swiss-Prot
Match: P54144 (Ammonium transporter 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=AMT1-1 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-07
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYG 62
           ++KYDDPLEA QLHGG GA  +IFT LFA E Y+  +YG
Sbjct: 359 KLKYDDPLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYG 397

[Close]
BLAST of IVF0021762 vs. ExPASy Swiss-Prot
Match: Q9LK16 (Putative ammonium transporter 1 member 5 OS=Arabidopsis thaliana OX=3702 GN=AMT1-5 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-07
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 24  VKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGS 64
           +KYDDPLEA QLHGG GA  +IF  LFA E Y+  VYG S
Sbjct: 363 LKYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYINEVYGAS 402

[Close]
BLAST of IVF0021762 vs. ExPASy Swiss-Prot
Match: Q9ZPJ8 (Ammonium transporter 1 member 2 OS=Arabidopsis thaliana OX=3702 GN=AMT1-2 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-07
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGG 63
           ++KYDDPLEA QLHGG GA  +IFT LFA + YV  +Y G
Sbjct: 373 KLKYDDPLEAAQLHGGCGAWGLIFTGLFARKEYVNEIYSG 412

[Close]
BLAST of IVF0021762 vs. ExPASy Swiss-Prot
Match: Q6K9G1 (Ammonium transporter 1 member 2 OS=Oryza sativa subsp. japonica OX=39947 GN=AMT1-2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.5e-07
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 24  VKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGSG 65
           +K+DDPLEA QLHGG GA  VIFT LFA + YV  ++G  G
Sbjct: 354 LKFDDPLEAAQLHGGCGAWGVIFTALFARKEYVDQIFGQPG 394

[Close]
BLAST of IVF0021762 vs. ExPASy Swiss-Prot
Match: O04161 (Ammonium transporter 1 member 2 OS=Solanum lycopersicum OX=4081 GN=AMT1-2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.5e-07
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGG 63
           ++KYDDPLEA QLHGG G+  +IFT LFA + YV  VY G
Sbjct: 368 KLKYDDPLEAAQLHGGCGSWGIIFTGLFAKKEYVNEVYPG 407

[Close]
BLAST of IVF0021762 vs. ExPASy TrEMBL
Match: A0A5D3DYF5 (Ammonium transporter 1 member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00100 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MDINHPRLCRLCHTNNLQPNYVEVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVY 60
          MDINHPRLCRLCHTNNLQPNYVEVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVY
Sbjct: 1  MDINHPRLCRLCHTNNLQPNYVEVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVY 60

Query: 61 GGSG 65
          GGSG
Sbjct: 61 GGSG 64

[Close]
BLAST of IVF0021762 vs. ExPASy TrEMBL
Match: A0A1S3AWD0 (Ammonium transporter OS=Cucumis melo OX=3656 GN=LOC103483533 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-09
Identity = 34/42 (80.95%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGSG 65
           +VKYDDPLEA QLHGG GA  VIFT LFATE YVT VYGGSG
Sbjct: 364 KVKYDDPLEAAQLHGGCGAWGVIFTALFATEEYVTEVYGGSG 405

[Close]
BLAST of IVF0021762 vs. ExPASy TrEMBL
Match: A0A0A0L9L2 (Ammonium transporter OS=Cucumis sativus OX=3659 GN=Csa_3G133960 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-09
Identity = 34/41 (82.93%), Postives = 34/41 (82.93%), Query Frame = 0 

Query: 24  VKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGSG 65
           VKYDDPLEA QLHGG GA  VIFT LFATE YVT VYGGSG
Sbjct: 365 VKYDDPLEAAQLHGGCGAWGVIFTALFATEEYVTEVYGGSG 405

[Close]
BLAST of IVF0021762 vs. ExPASy TrEMBL
Match: A0A6J1EBZ8 (Ammonium transporter OS=Cucurbita moschata OX=3662 GN=LOC111431809 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.4e-08
Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGS 64
           + KYDDPLEA QLHGG GA  VIFT LFAT+ YVT VYGGS
Sbjct: 364 KAKYDDPLEAAQLHGGCGAWGVIFTALFATKEYVTEVYGGS 404

[Close]
BLAST of IVF0021762 vs. ExPASy TrEMBL
Match: A0A6J1IYT6 (Ammonium transporter OS=Cucurbita maxima OX=3661 GN=LOC111479693 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-07
Identity = 30/41 (73.17%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGS 64
           + KYDDPLEA QLHGG GA  VIFT LFAT+ YV  VYGGS
Sbjct: 364 KAKYDDPLEAAQLHGGCGAWGVIFTALFATKEYVAEVYGGS 404

[Close]
BLAST of IVF0021762 vs. NCBI nr
Match: KAA0065982.1 (ammonium transporter 1 member 1-like [Cucumis melo var. makuwa] >TYK28927.1 ammonium transporter 1 member 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (352), Expect = 7.03e-42
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MDINHPRLCRLCHTNNLQPNYVEVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVY 60
          MDINHPRLCRLCHTNNLQPNYVEVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVY
Sbjct: 1  MDINHPRLCRLCHTNNLQPNYVEVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVY 60

Query: 61 GGSG 64
          GGSG
Sbjct: 61 GGSG 64

[Close]
BLAST of IVF0021762 vs. NCBI nr
Match: XP_008438437.1 (PREDICTED: ammonium transporter 1 member 1-like [Cucumis melo])

HSP 1 Score: 70.9 bits (172), Expect = 2.59e-12
Identity = 34/42 (80.95%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGSG 64
           +VKYDDPLEA QLHGG GA  VIFT LFATE YVT VYGGSG
Sbjct: 364 KVKYDDPLEAAQLHGGCGAWGVIFTALFATEEYVTEVYGGSG 405

[Close]
BLAST of IVF0021762 vs. NCBI nr
Match: XP_004134393.1 (ammonium transporter 1 member 1 [Cucumis sativus] >KGN56796.1 hypothetical protein Csa_011362 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 3.54e-12
Identity = 34/41 (82.93%), Postives = 34/41 (82.93%), Query Frame = 0 

Query: 24  VKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGSG 64
           VKYDDPLEA QLHGG GA  VIFT LFATE YVT VYGGSG
Sbjct: 365 VKYDDPLEAAQLHGGCGAWGVIFTALFATEEYVTEVYGGSG 405

[Close]
BLAST of IVF0021762 vs. NCBI nr
Match: XP_038876582.1 (ammonium transporter 1 member 1-like [Benincasa hispida])

HSP 1 Score: 68.2 bits (165), Expect = 2.31e-11
Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGSG 64
           +VKYDDPLEA QLHGG GA  VIFT LFAT+ YVT VYGG+G
Sbjct: 364 KVKYDDPLEAAQLHGGCGAWGVIFTALFATKEYVTEVYGGTG 405

[Close]
BLAST of IVF0021762 vs. NCBI nr
Match: KAG7018827.1 (Ammonium transporter 1 member 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.5 bits (158), Expect = 2.05e-10
Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGS 63
           + KYDDPLEA QLHGG GA  VIFT LFAT+ YVT VYGGS
Sbjct: 364 KAKYDDPLEAAQLHGGCGAWGVIFTALFATKEYVTEVYGGS 404

[Close]
BLAST of IVF0021762 vs. TAIR 10
Match: AT4G13510.1 (ammonium transporter 1;1 )

HSP 1 Score: 56.6 bits (135), Expect = 8.4e-09
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYG 62
           ++KYDDPLEA QLHGG GA  +IFT LFA E Y+  +YG
Sbjct: 359 KLKYDDPLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYG 397

[Close]
BLAST of IVF0021762 vs. TAIR 10
Match: AT3G24290.1 (ammonium transporter 1;5 )

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-08
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 24  VKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGS 64
           +KYDDPLEA QLHGG GA  +IF  LFA E Y+  VYG S
Sbjct: 363 LKYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYINEVYGAS 402

[Close]
BLAST of IVF0021762 vs. TAIR 10
Match: AT1G64780.1 (ammonium transporter 1;2 )

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-08
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGG 63
           ++KYDDPLEA QLHGG GA  +IFT LFA + YV  +Y G
Sbjct: 373 KLKYDDPLEAAQLHGGCGAWGLIFTGLFARKEYVNEIYSG 412

[Close]
BLAST of IVF0021762 vs. TAIR 10
Match: AT3G24300.1 (ammonium transporter 1;3 )

HSP 1 Score: 53.9 bits (128), Expect = 5.5e-08
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 24  VKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGGS 64
           V+YDDPLEA QLHGG GA  +IF  LFA E Y+  VYG +
Sbjct: 364 VQYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGAT 403

[Close]
BLAST of IVF0021762 vs. TAIR 10
Match: AT4G28700.1 (ammonium transporter 1;4 )

HSP 1 Score: 53.1 bits (126), Expect = 9.3e-08
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 23  EVKYDDPLEATQLHGGSGAREVIFTTLFATEVYVTGVYGG 63
           ++++DDPLEA QLHGG GA  +IFT LFA + Y+  ++GG
Sbjct: 370 KLQFDDPLEAAQLHGGCGAWGIIFTGLFAEKRYIAEIFGG 409

The following BLAST results are available for this feature:
BLAST of IVF0021762 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P541441.2e-0764.10Ammonium transporter 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=AMT1-1 PE=1 S... [more]
Q9LK161.5e-0765.00Putative ammonium transporter 1 member 5 OS=Arabidopsis thaliana OX=3702 GN=AMT1... [more]
Q9ZPJ82.6e-0762.50Ammonium transporter 1 member 2 OS=Arabidopsis thaliana OX=3702 GN=AMT1-2 PE=1 S... [more]
Q6K9G14.5e-0760.98Ammonium transporter 1 member 2 OS=Oryza sativa subsp. japonica OX=39947 GN=AMT1... [more]
O041614.5e-0762.50Ammonium transporter 1 member 2 OS=Solanum lycopersicum OX=4081 GN=AMT1-2 PE=2 S... [more]
BLAST of IVF0021762 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DYF53.0e-30100.00Ammonium transporter 1 member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3AWD02.2e-0980.95Ammonium transporter OS=Cucumis melo OX=3656 GN=LOC103483533 PE=3 SV=1[more]
A0A0A0L9L22.9e-0982.93Ammonium transporter OS=Cucumis sativus OX=3659 GN=Csa_3G133960 PE=3 SV=1[more]
A0A6J1EBZ89.4e-0875.61Ammonium transporter OS=Cucurbita moschata OX=3662 GN=LOC111431809 PE=3 SV=1[more]
A0A6J1IYT63.6e-0773.17Ammonium transporter OS=Cucurbita maxima OX=3661 GN=LOC111479693 PE=3 SV=1[more]
BLAST of IVF0021762 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065982.17.03e-42100.00ammonium transporter 1 member 1-like [Cucumis melo var. makuwa] >TYK28927.1 ammo... [more]
XP_008438437.12.59e-1280.95PREDICTED: ammonium transporter 1 member 1-like [Cucumis melo][more]
XP_004134393.13.54e-1282.93ammonium transporter 1 member 1 [Cucumis sativus] >KGN56796.1 hypothetical prote... [more]
XP_038876582.12.31e-1176.19ammonium transporter 1 member 1-like [Benincasa hispida][more]
KAG7018827.12.05e-1075.61Ammonium transporter 1 member 1, partial [Cucurbita argyrosperma subsp. argyrosp... [more]
BLAST of IVF0021762 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G13510.18.4e-0964.10ammonium transporter 1;1 [more]
AT3G24290.11.1e-0865.00ammonium transporter 1;5 [more]
AT1G64780.11.9e-0862.50ammonium transporter 1;2 [more]
AT3G24300.15.5e-0862.50ammonium transporter 1;3 [more]
AT4G28700.19.3e-0855.00ammonium transporter 1;4 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021762.2IVF0021762.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0072488 ammonium transmembrane transport
cellular_component GO:0005887 integral component of plasma membrane
molecular_function GO:0008519 ammonium transmembrane transporter activity