IVF0021630 (gene) Melon (IVF77) v1

Overview
NameIVF0021630
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 2479480 .. 2479662 (+)
RNA-Seq ExpressionIVF0021630
SyntenyIVF0021630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATAGAGGCGTCACCACAGGGCAAAGGCACGGGCGCCCAGTGTCTGCCAGTGGTCACCATTCTGCATGCAACCCTCCCCACAGATGCTTTGTCCCCACCCCCACCGAATCCTTCACTTCAACCCATGTCTTTTGGGCTTGGCCCAATTGTTTTTCTCCCACCTTTAGGCCCAAATTGA

mRNA sequence

ATGGCAATAGAGGCGTCACCACAGGGCAAAGGCACGGGCGCCCAGTGTCTGCCAGTGGTCACCATTCTGCATGCAACCCTCCCCACAGATGCTTTGTCCCCACCCCCACCGAATCCTTCACTTCAACCCATGTCTTTTGGGCTTGGCCCAATTGTTTTTCTCCCACCTTTAGGCCCAAATTGA

Coding sequence (CDS)

ATGGCAATAGAGGCGTCACCACAGGGCAAAGGCACGGGCGCCCAGTGTCTGCCAGTGGTCACCATTCTGCATGCAACCCTCCCCACAGATGCTTTGTCCCCACCCCCACCGAATCCTTCACTTCAACCCATGTCTTTTGGGCTTGGCCCAATTGTTTTTCTCCCACCTTTAGGCCCAAATTGA

Protein sequence

MAIEASPQGKGTGAQCLPVVTILHATLPTDALSPPPPNPSLQPMSFGLGPIVFLPPLGPN
Homology
[Close]
BLAST of IVF0021630 vs. ExPASy TrEMBL
Match: A0A0A0KN09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513700 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18
Identity = 50/60 (83.33%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 1  MAIEASPQGKGTGAQCLPVVTILHATLPTDALSPPPPNPSLQPMSFGLGPIVFLPPLGPN 60
          MAIEASPQGKGTGAQCLPVVTILHATLPT ALSPP PNPS+QPM  G GP +  PPLGPN
Sbjct: 1  MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPNPSIQPMPLGPGPFLSPPPLGPN 60

[Close]
BLAST of IVF0021630 vs. NCBI nr
Match: KGN49106.1 (hypothetical protein Csa_003784 [Cucumis sativus])

HSP 1 Score: 100 bits (250), Expect = 1.99e-26
Identity = 50/60 (83.33%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 1  MAIEASPQGKGTGAQCLPVVTILHATLPTDALSPPPPNPSLQPMSFGLGPIVFLPPLGPN 60
          MAIEASPQGKGTGAQCLPVVTILHATLPT ALSPP PNPS+QPM  G GP +  PPLGPN
Sbjct: 1  MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPNPSIQPMPLGPGPFLSPPPLGPN 60

The following BLAST results are available for this feature:
BLAST of IVF0021630 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0021630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN091.5e-1883.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513700 PE=4 SV=1[more]
BLAST of IVF0021630 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49106.11.99e-2683.33hypothetical protein Csa_003784 [Cucumis sativus][more]
BLAST of IVF0021630 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021630.1IVF0021630.1mRNA