IVF0021627 (gene) Melon (IVF77) v1

Overview


Name	IVF0021627
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cytochrome c biogenesis B
Location	chr10: 23157139 .. 23157760 (-)
RNA-Seq Expression	IVF0021627
Synteny	IVF0021627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACGACTCTTTCTTTCACTATATCATAAATGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCATCGTCATGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTTCTTTTCCTCCCGCAACTTTTCCTCAAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAACTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTCTTTTCTGTGGTTTTCCCATGTTCAAACTTTCGTACCAATTTGGTCGATCCGGAATGGATCGATTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTATGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCATCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCTAACCTTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCTAATTTTGGTCTCTCTGAGTTTACAAGATTGA

mRNA sequence

ATGAGACGACTCTTTCTTTCACTATATCATAAATGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCATCGTCATGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTTCTTTTCCTCCCGCAACTTTTCCTCAAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAACTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTCTTTTCTGTGGTTTTCCCATGTTCAAACTTTCGTACCAATTTGGTCGATCCGGAATGGATCGATTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTATGGTATTCATTCTCCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCTAACCTTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCTAATTTTGGTCTCTCTGAGTTTACAAGATTGA

Coding sequence (CDS)

ATGAGACGACTCTTTCTTTCACTATATCATAAATGGATCTTCCCCTCCACACCAATCACGAGTTTTTCTCCATTCCTCTCGTATATCATCGTCATGCCCTTAATGCTAGGTTTTGAAAAAGACTTTTCATGTCATTCCCATTTAGGTCCGATTCGGATCCCTCCGTTGTTTTCTTTTCCTCCCGCAACTTTTCCTCAAAATGAGAAAGAAGATGGTACACTCGAATTGTATTATTTAACTGCTTATTGCTTGCCAAAGATCCTACTTCTACAATTGGTAGGTCACCGGGTTATTCAAATAAGTTGTCTTTTCTGTGGTTTTCCCATGTTCAAACTTTCGTACCAATTTGGTCGATCCGGAATGGATCGATTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTATGGTATTCATTCTCCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCTAACCTTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCTAATTTTGGTCTCTCTGAGTTTACAAGATTGA

Protein sequence

MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFPPATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSGMDRLNILLGSLVLTLLYGIHSPRKIQPLHLLHCPLTFSRTSIETEWFHVPSSIGYSSPFVSLFLILVSLSLQD

Homology

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BLAST of IVF0021627 vs. ExPASy Swiss-Prot
Match: P93280 (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMB PE=2 SV=2)

HSP 1 Score: 251.1 bits (640), Expect = 9.9e-66
Identity = 142/207 (68.60%), Postives = 151/207 (72.95%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLF  LY+K IF STPITSFS FL YI+V PLMLGFEKDF CH HLG I I  LFSF 
Sbjct: 1   MRRLFFELYYKLIFSSTPITSFSLFLLYIVVTPLMLGFEKDFLCHFHLGLIWISLLFSFL 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
            A F +NEKEDGTLELYYL+ YCLPKILLLQLVGH VIQISC+FCGFPM +L YQFGRSG
Sbjct: 61  SALFFRNEKEDGTLELYYLSTYCLPKILLLQLVGHWVIQISCVFCGFPMLQLLYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIH--------------SPRKIQPLHLLHCPLTFSRTSIETEW 180
           MD LNILLGSLVLTLL GIH              S + +  L  L  PLT   TSIETEW
Sbjct: 121 MDWLNILLGSLVLTLLCGIHSCLALGITSSSGWNSSQNLTTLPTL-LPLTVFCTSIETEW 180

Query: 181 FHVPSSIGYSSPFVSLFLILVSLSLQD 194
           FHV   IGY   FVSLF I VS+SLQD
Sbjct: 181 FHVLLLIGYFFLFVSLFPISVSISLQD 206

[Close]

BLAST of IVF0021627 vs. ExPASy Swiss-Prot
Match: P38454 (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia polymorpha OX=3197 GN=CCMB PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-43
Identity = 105/204 (51.47%), Postives = 132/204 (64.71%), Query Frame = 0


Query: 3   RLFLSLYHKWIF--PSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 62
           ++FL L+++ I    ST IT+FS FL YI+V PLM+GF KDF CH HLG I I  LFSF 
Sbjct: 69  KIFLKLFYQHILLNLSTLITTFSLFLLYIVVTPLMIGFSKDFLCHFHLGLIWICLLFSFL 128

Query: 63  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 122
           P  F QN+ EDGTLELYYL+ YCL KILL +L GH V+QIS +FC FP+ +L YQF +S 
Sbjct: 129 PERFFQNDFEDGTLELYYLSGYCLQKILLSKLYGHWVLQISGVFCSFPVLQLLYQFDQSK 188

Query: 123 MDRLNILLGSLVLTLLYGIHSP----------RKIQPLHLLH--CPLTFSRTSIETEWFH 182
           M+   I++GS + TL+ GIHS             +Q L  L    PL    TSIETEWFH
Sbjct: 189 MNWFTIIIGSQIFTLMCGIHSCLALGITSNGWNSLQNLTTLPTLLPLIVFCTSIETEWFH 248

Query: 183 VPSSIGYSSPFVSLFLILVSLSLQ 193
           V   +GY   F+  + ILVS++LQ
Sbjct: 249 VILLMGYLLLFLFFYPILVSITLQ 272

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BLAST of IVF0021627 vs. ExPASy TrEMBL
Match: G3EU22 (Cytochrome c biogenesis B OS=Cucumis melo subsp. melo OX=412675 GN=ccmB PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.8e-86
Identity = 170/209 (81.34%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFLSLYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+AYCLPKILLLQLVGHRVIQISCLFCGFPMFKL YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNILLGSLVLTLL GIHS   +                 P  L   P T SRTSIET
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL---PPTLSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 194
           EWFHVPSSIGYSSPFVSLF I VSLSLQD
Sbjct: 181 EWFHVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of IVF0021627 vs. ExPASy TrEMBL
Match: A0A3Q9CS08 (Cytochrome c biogenesis B OS=Cucumis melo var. momordica OX=2034244 GN=ccmB PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.8e-86
Identity = 170/209 (81.34%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFLSLYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+AYCLPKILLLQLVGHRVIQISCLFCGFPMFKL YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNILLGSLVLTLL GIHS   +                 P  L   P T SRTSIET
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL---PPTLSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 194
           EWFHVPSSIGYSSPFVSLF I VSLSLQD
Sbjct: 181 EWFHVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of IVF0021627 vs. ExPASy TrEMBL
Match: A0A7D6C7C3 (Cytochrome c biogenesis B OS=Luffa acutangula OX=56866 GN=ccmB PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.7e-84
Identity = 167/209 (79.90%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFLSLYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+AYCLPKILLLQLVGHRVIQISC+FCGFPM KL YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNILLGSLVLTLL GIHS   +                 P  L   P T SRTSIET
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL---PPTVSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 194
           EWFHVPSSIGYSSPFVSLF I VS+SLQD
Sbjct: 181 EWFHVPSSIGYSSPFVSLFPISVSISLQD 206

[Close]

BLAST of IVF0021627 vs. ExPASy TrEMBL
Match: G3EIY1 (Cytochrome c biogenesis B OS=Cucumis sativus OX=3659 GN=ccmB PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 166/209 (79.43%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFL LYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLELYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+AYCLPKILLLQL+GH VIQISCLFCGFPM KL YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLLGHWVIQISCLFCGFPMLKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNILLGSLVLTLL GIHS   +                 P  L   P T SRTSIET
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL---PPTLSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 194
           EWFHVPSSIGYSSPFVSLF I VSLSLQD
Sbjct: 181 EWFHVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of IVF0021627 vs. ExPASy TrEMBL
Match: A0A2P6P101 (Putative cytochrome c-type biogenesis protein CcmB OS=Rosa chinensis OX=74649 GN=RchiOBHm_MTg0498291 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 162/206 (78.64%), Postives = 170/206 (82.52%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFL LYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 11  MRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 70

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA F +NEKEDGTLELYYL+AYCLPKILLLQLVGHRVIQISC+FCGFPM +L YQF +SG
Sbjct: 71  PAPFSRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQLLYQFSQSG 130

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI------------QPLHL-LHCPLTFSRTSIETEWF 180
           MDRLNILLGSLVLTLL GIHS   +             P  L    P T SRTSIETEWF
Sbjct: 131 MDRLNILLGSLVLTLLCGIHSRSALGITSSSGWNSSQNPTTLPTSLPPTVSRTSIETEWF 190

Query: 181 HVPSSIGYSSPFVSLFLILVSLSLQD 194
           HVPSSIGYSSPFVSLF I VS+SLQD
Sbjct: 191 HVPSSIGYSSPFVSLFPISVSISLQD 216

[Close]

BLAST of IVF0021627 vs. NCBI nr
Match: AEN56106.1 (cytochrome c biogenesis B [Cucumis melo subsp. melo] >AZP40281.1 cytochrome c biogenesis B [Cucumis melo var. momordica])

HSP 1 Score: 325 bits (834), Expect = 4.49e-111
Identity = 170/209 (81.34%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFLSLYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+AYCLPKILLLQLVGHRVIQISCLFCGFPMFKL YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNILLGSLVLTLL GIHS   +                 P  L   P T SRTSIET
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL---PPTLSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 193
           EWFHVPSSIGYSSPFVSLF I VSLSLQD
Sbjct: 181 EWFHVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of IVF0021627 vs. NCBI nr
Match: YP_009913630.1 (cytochrome c biogenesis B [Luffa acutangula] >QLJ93004.1 cytochrome c biogenesis B [Luffa acutangula])

HSP 1 Score: 321 bits (822), Expect = 3.03e-109
Identity = 167/209 (79.90%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFLSLYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLSLYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+AYCLPKILLLQLVGHRVIQISC+FCGFPM KL YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNILLGSLVLTLL GIHS   +                 P  L   P T SRTSIET
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL---PPTVSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 193
           EWFHVPSSIGYSSPFVSLF I VS+SLQD
Sbjct: 181 EWFHVPSSIGYSSPFVSLFPISVSISLQD 206

[Close]

BLAST of IVF0021627 vs. NCBI nr
Match: YP_004849329.1 (cytochrome c biogenesis B [Cucumis sativus] >ADZ10756.1 cytochrome c biogenesis B [Cucumis sativus])

HSP 1 Score: 317 bits (813), Expect = 7.11e-108
Identity = 166/209 (79.43%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFL LYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLELYHKRIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+AYCLPKILLLQL+GH VIQISCLFCGFPM KL YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLLGHWVIQISCLFCGFPMLKLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNILLGSLVLTLL GIHS   +                 P  L   P T SRTSIET
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSL---PPTLSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 193
           EWFHVPSSIGYSSPFVSLF I VSLSLQD
Sbjct: 181 EWFHVPSSIGYSSPFVSLFPISVSLSLQD 206

[Close]

BLAST of IVF0021627 vs. NCBI nr
Match: QXE45588.1 (cytochrome c biogenesis B [Prosopis glandulosa])

HSP 1 Score: 312 bits (800), Expect = 6.79e-106
Identity = 163/209 (77.99%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFL LYHK IFPSTPITSFSPFLSYI+V PL+LGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLILGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+AYCLPKILLLQLVGHRVIQISC+FCGFPM +L YQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQLPYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNILLGSLVLTLL GIHS   +                 P  L   P T SRTSIET
Sbjct: 121 MDRLNILLGSLVLTLLCGIHSRLALGITSSSGWNSSQNPTTSPTSL---PPTVSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 193
           EWFHV SSIGYSSPFVSLF I VS+SLQD
Sbjct: 181 EWFHVLSSIGYSSPFVSLFPISVSISLQD 206

[Close]

BLAST of IVF0021627 vs. NCBI nr
Match: PRQ15603.1 (putative cytochrome c-type biogenesis protein CcmB [Rosa chinensis])

HSP 1 Score: 311 bits (797), Expect = 2.75e-105
Identity = 162/206 (78.64%), Postives = 170/206 (82.52%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFL LYHK IFPSTPITSFSPFLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 11  MRRLFLELYHKQIFPSTPITSFSPFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 70

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA F +NEKEDGTLELYYL+AYCLPKILLLQLVGHRVIQISC+FCGFPM +L YQF +SG
Sbjct: 71  PAPFSRNEKEDGTLELYYLSAYCLPKILLLQLVGHRVIQISCVFCGFPMLQLLYQFSQSG 130

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI------------QPLHL-LHCPLTFSRTSIETEWF 180
           MDRLNILLGSLVLTLL GIHS   +             P  L    P T SRTSIETEWF
Sbjct: 131 MDRLNILLGSLVLTLLCGIHSRSALGITSSSGWNSSQNPTTLPTSLPPTVSRTSIETEWF 190

Query: 181 HVPSSIGYSSPFVSLFLILVSLSLQD 193
           HVPSSIGYSSPFVSLF I VS+SLQD
Sbjct: 191 HVPSSIGYSSPFVSLFPISVSISLQD 216

[Close]

BLAST of IVF0021627 vs. TAIR 10
Match: ATMG00110.1 (cytochrome C biogenesis 206 )

HSP 1 Score: 300.4 bits (768), Expect = 1.0e-81
Identity = 160/209 (76.56%), Postives = 167/209 (79.90%), Query Frame = 0


Query: 1   MRRLFLSLYHKWIFPSTPITSFSPFLSYIIVMPLMLGFEKDFSCHSHLGPIRIPPLFSFP 60
           MRRLFL LYHK IF STPITSFS FLSYI+V PLMLGFEKDFSCHSHLGPIRIPPLF FP
Sbjct: 1   MRRLFLELYHKLIFSSTPITSFSSFLSYIVVTPLMLGFEKDFSCHSHLGPIRIPPLFPFP 60

Query: 61  PATFPQNEKEDGTLELYYLTAYCLPKILLLQLVGHRVIQISCLFCGFPMFKLSYQFGRSG 120
           PA FP+NEKEDGTLELYYL+ YCLPKILLLQLVGHRVIQIS +FCGFPM +LSYQFGRSG
Sbjct: 61  PAPFPRNEKEDGTLELYYLSTYCLPKILLLQLVGHRVIQISRVFCGFPMLQLSYQFGRSG 120

Query: 121 MDRLNILLGSLVLTLLYGIHSPRKI----------------QPLHLLHCPLTFSRTSIET 180
           MDRLNI LGSLVLTLL GIHS   +                 P  L   PLT SRTSIET
Sbjct: 121 MDRLNIPLGSLVLTLLCGIHSRSALGITSSSGWNSSQNPTTSPTLL---PLTVSRTSIET 180

Query: 181 EWFHVPSSIGYSSPFVSLFLILVSLSLQD 194
           EWFHV SSIGYSS FVSLF I VS+SLQD
Sbjct: 181 EWFHVLSSIGYSSLFVSLFPISVSISLQD 206

The following BLAST results are available for this feature:

BLAST of IVF0021627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93280	9.9e-66	68.60	Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis ...	[more]
P38454	1.4e-43	51.47	Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia p...	[more]

BLAST of IVF0021627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
G3EU22	6.8e-86	81.34	Cytochrome c biogenesis B OS=Cucumis melo subsp. melo OX=412675 GN=ccmB PE=3 SV=...	[more]
A0A3Q9CS08	6.8e-86	81.34	Cytochrome c biogenesis B OS=Cucumis melo var. momordica OX=2034244 GN=ccmB PE=3...	[more]
A0A7D6C7C3	1.7e-84	79.90	Cytochrome c biogenesis B OS=Luffa acutangula OX=56866 GN=ccmB PE=3 SV=1	[more]
G3EIY1	1.9e-83	79.43	Cytochrome c biogenesis B OS=Cucumis sativus OX=3659 GN=ccmB PE=3 SV=1	[more]
A0A2P6P101	1.3e-81	78.64	Putative cytochrome c-type biogenesis protein CcmB OS=Rosa chinensis OX=74649 GN...	[more]

BLAST of IVF0021627 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56106.1	4.49e-111	81.34	cytochrome c biogenesis B [Cucumis melo subsp. melo] >AZP40281.1 cytochrome c bi...	[more]
YP_009913630.1	3.03e-109	79.90	cytochrome c biogenesis B [Luffa acutangula] >QLJ93004.1 cytochrome c biogenesis...	[more]
YP_004849329.1	7.11e-108	79.43	cytochrome c biogenesis B [Cucumis sativus] >ADZ10756.1 cytochrome c biogenesis ...	[more]
QXE45588.1	6.79e-106	77.99	cytochrome c biogenesis B [Prosopis glandulosa]	[more]
PRQ15603.1	2.75e-105	78.64	putative cytochrome c-type biogenesis protein CcmB [Rosa chinensis]	[more]

BLAST of IVF0021627 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00110.1	1.0e-81	76.56	cytochrome C biogenesis 206	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR30070:SF2	CYTOCHROME C BIOGENESIS B	coord: 1..193
IPR003544	Cytochrome c-type biogenesis protein CcmB	PANTHER	PTHR30070	HEME EXPORTER PROTEIN B	coord: 1..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021627.1	IVF0021627.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0015886	heme transport
cellular_component	GO:0043190	ATP-binding cassette (ABC) transporter complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016020	membrane
molecular_function	GO:0015232	heme transmembrane transporter activity