IVF0021610 (gene) Melon (IVF77) v1

Overview
NameIVF0021610
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Locationchr09: 5160869 .. 5166787 (-)
RNA-Seq ExpressionIVF0021610
SyntenyIVF0021610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTTAGGCGTTGTAGCCTAGTTAAGGAGGAAAGACAGAGTTACTTTGTAGACTTATGTGGCATGACAGTTGTGTTATCTTATCTTACGTCTAAGGAGCCGGTTGGTAAGCGCACTGCTTCTTAGAGTAAATGGCTTAGCTCGGAAGAAAGGTGAAAGCAATACCTAGGCTGGTAGAACTAAGCCAGGGAAGCCAGAGGGCCAGAAAGCTGAGTTAGGGGAGGAACAACCCTATATGTGGTTCGCTAAAAGAGGTGGTTAGACGATCAAAGCAAAGTTCTAAGTTGTGCTTTTACACTTCTAGGTACCTTCTGCAATAATAGTGTTCGGCGACACAGAGAGAAAAGGGTTGTGGAGGGTTTCCCTGAAGTGAGGATGTTGATGACTCAAGGGAAAGGGGTTGAAGAAAGGGATCTTGGATTCCCAAAGACCTCGACACGAAGAGTTGCACCTTGGAGTAAAAAAGATAACACGGTGCATTGCCACACGATGAGGCGAGCAACCCAGACGTAAAGTTGTAAGGCTGAGCTAGGTATAGGGAGGCCTAAAGATAATGTTTAAATTTTGTTGTAAGAAAAAGTCTAAGTTTATTTGAACATTGTAAAAGTGTTAAGTTAATAAAGAAAAGTTATGTACTTATTTCGTTACATTATCTTGTGCCTGTCGTGTAAGTAGTTGAAAGGTATTATCCAGCTAAGTATTAAAGGTCCGACGATAAGGCTAAATTAATGGAATTAAGTTGTTGTATTATGCTATTATGTTAAGAAAGCTTGACGTTTAAGCCCTACTGAGGTTGTAAAAGAGAAGTATTTTGCTTACTAGGCATTCGACGTTTACTACATGGTGTGGTAAGCGTTGAATGTCTAGGCAGCCCACCTTCATTAGGTTTCGAGAAGCGACTTTAGGGGCGGGGTGTGACAAGTGGTATTAAAGCGTAAGTTTTTGGGAAAGATGAAGTTGACCTTTGTTTGGCATAAGAGTAAGTTGTAAGTTGTTTTAGTGGGAAAAGTTGAGCTAAATTTTAAACTATTCTTGTAGGAAGTAGTTGATATCATGCCTGAATAAGAAAAGAGCAAGCTAGACCGCGGACTACTACTGAGCTTATAATGGACTCTGAATCTCACTCAATCAATCAATATACAAGAAGAGAAAGGGCAGAGGCATTACCTGAGCGAGTTACCCAAACATTAAGAAATTCAGAAAAGAAATTTGGTATTGAGAGACGGAAGGCATAGGAGCCACAATTTTCGTAGCAACTACACATCCAGCTGATGCAGAGAAGTGGCTAAGCTCGATTGGAAATTCTTCGAGCTAACAAGTCGTCCTAAAGATTAGGAAGTGAGGTTGACAACGTTTATGTTGCAAGGTAACCCTACCAATCGTACTTCTTTACAAACTTTTGTCAACTTTTTCTCTAGAACTATCTTTTGAAATCTTGAGTTTGAAATCTTGAGATGAGATGCAACATGAGTTTTCTTAGGTTTAGACTGATCAAGACCAAACTTCTTTACCATATTTTTAGCATATTTTTCTTGAGATAGAAAAATCCCAATATTGCACTAACGAATTTGGAAACTCAAGAAGAAAGCCATCCACCCACCATACTTATTTCAAACTCAGATTGGATTTGTTCAATGAAACTTAATATAATAGTTGGAGGATACCCACCAAAAATAATATCATCAACGTAGACTTGAGCGACTAGAAAATCATGTCCCTACTATTTAATGAACATAGTCTTATCAGCATATCCTTGTTGTGACAGAAACTGAGTTAAGCGTTCATATCAAGCCTTAGGAGCTTGCTTAAGACCATGCAAGGCTTTATGGAGTTTTTACACATAATCTGGGTTTGAAAGATCTACAAAATCCTTAGGTTGAGCAACATACAATTCCTCATTGAGAAAACCTTTCAAGAATGCCCTTTTGACATCCATTTGATACAGATTGACTTTACAAATGAAAGTTAGACCAAGCAATAGTCAAATGGTTTCAAGTCTAAAAGTTTCCCAAAATCCACACCTTCAATTTATGCATATCCTTGAGCAACAAGGCAACCTTTGTTTCTTGTCACACAACCCTTCTCATCAGTTGTATTTTTTTAGATTCACTTGGTGCCAATAATGTTAGCATTAGCCGGTTTTGGAACCAACTACCATACTTGATTACGTTCAAATTGAAGTAACTCCTCTTGCATTGCAACAATCATTGTTCATCCTTTAGAGCTTCAGTAACATTTGTAGGTTCAATAGGAGATGTATAACATACATTCTCAATCATCTTTGCATAATCATGAAGCTCCTTCTTACGAGTTATTGTCTCTAAAGTTAATAATCGACAGATAAACATAATACAGCTAGATGGGAATACAGCTAGATGGGTGATTCTTTTTAACATGAGTAGATGGAGCAATGTGTTGAATATCCGATAGAACAGTTGAGCTAATGTCCTTGTTGTTGTCTCTAAAGTTAATAATCGACAGATAAACATAATCAACAGTGACTGGCTCATTACTCAAAGAGGAAACATCATATGTATTCTCCCAGTTAATAGCAGAAGGCAAAACATTTGAATTACCTGTATAATTAGTAGATGAATTGATAGGAACAAAAGCCTAATCATCATCCTCTCTAACCTTCACTTGTTTTTCACATGTATCATTAATAACAACATTAATAGATTCAAGAATAGTTTTGGTTTTCTTGTTAAACACTCTAAAAGCTCTACTATCTGAAGATTACCAAGAAAGATGCCTTCCTCGAATTTAGAGTCTCATTTACGATGAAACTCCCTATCACTCAGAATATGACACGTGCTTTTAAAAACATGGAAGTACTTGACGTTTGGTTTATGTCCTTTCCATAACTGATAATTTGTTAAAGGTGTACCTAGATAAAGAGAAATGTGATTGTGGATGTGACAAGAAGTACTTAAAGCCTCAGCTCAAAAGTACAAAGGAAGAGACTTGGCATGTAGCATCATGCGAGCCATTTCTTGCAACGTTCTATTTTTCATTCAACAATCCCATTTTGCTGAGGAGTCAAAGGAGCAGAATATTCATGAAAGATTCTTTCATGTTGACAAAACTCATTAAAGGCAGAATTCTCAAACTCTCTCTCATGATAATTGTGAATATGCACAATAAATTTATCTTGTTCTTTTTGTAGTTGAATATGCAAGGGTCTATAGACTTTTAAAAATATTCATTTCATTTCTAATGAACTCTATCCAAGTGCATCTTGAGAAATTATCAAAACACACAAAAGCATACCTTTTCCCACCAAGGCTTTCAACTTGCATAGGGCCCATCAAATCCATATGAAGAAATTCAAGTACGCGATGTGTAATACATTACCCAATAGACTTATGAGAAGATTTAACTTGTTTCCCAATAAGACATTCTTCACAGAAATTTTCCGAGACATTCTTCAATAGAGGAATTCCTAACAAAGCCTTTGCTCCAATAGTCTTTCATATGGTACAGATACTTATATGTCCAAGACATTTATGCCATAGCTCGACTTCATCAAATTTAGACAAATGACACAAATAGTATTTTAGTTGGAATTCCAGTGATAGCAGTTATCAGATATACGCAGAACTGATGGAAAATCTAGACATGTGCAGTGAAAGTACAGATCGAAAATTACTCTAGCTGCAACTAAACTATTTAGTGATTAACATGCTTAATTCTACCATAATAAAAAGAAATTAAGGTTAAGATAAATACTTACCTTCGAACCTTCCCAATCCTCGAAATCTCTTCATGATCACGAACCTAGACCACCACTAGTGTTGACCCGCTATTCTCCGAACTTAGAACTGGGTTGTGGGACTCGTTAAGTGAAGAAAAATATGAGAGAGGAATGGAAAATGGAGGAGGAAATTAGGTTGAGATTTGAGAGAGAGAAAAAATAGGTTTATTTTATAATTCAAAATTTAAAAAATGGCAAAAATATTCTTATGACCCGACCACAAAACATAAAAACTCATAAAGGACCGGTTACGATTCATTAAAAACGTTAGAAATATTACAAAAGCAGTTTCGGGCCCTAGTTTAAATCACAGTCACGAGAGTTTCAAATACAATACTCAAGTCATCAAACTCAAAATCACAAAACCAAATATTCTAACAAAATATATCAGCGGAAGAATAAAGAAAACCAGACGCGTCCATATGGCCTTCACGCATCCTTCCTGCCCCTCGTTGTACCCTTACCTGAAAAGTTAAAGAAGAGAAAGGGTGAGTATAAAATATACCCAGTAAGGGACCCACTACTGGGCTCGTTAGGGAACAACAGTTAACTTCCTATTCAGGGGTACCCTACGTAAACAGTCTAGTGGTTTCGTAGAACGCACACATCAGTCCCGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCGAAGGATACACCTATCAGTCTAGTGATCCCGAGGGATGCACATATCAGTCTAGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCAAAGGATACACCTATCCGTAAGGTACACTACCCCATAGATGAAGCTAACCGTTACCCCTCAGTCCATACTAAATTGTCTACAATAGTCATCCTCCGACAACAGTCATATTACAAATTTGCCATAGGCTTCTCCAATCAGATGGTATAGATCTAAACAACTACATCCTCAGTTGCTATAAGCGTTTCTAATTCACACACCATGGTGATATTCCTTAGATCCAGTCAACTAGTCAAAGCAGAACCGGACTCACAATCCTTCCACGACAAAACTCCAAGATCAATATCCAGACAATAGACTACCACATACCTAACCTTAAGACTTTAAAGTCCATCGACATACAAATTCAGTCCACAACGTAGCCCATTAACATAACTACAATATACAGAACATCCGGGCATCGGTGTCTATCTGTAAACAACTCCTTACACCCGATGGCACACAAGCTACAACTAGCGGTCACGTTACCTTTACATCAGACAAGAGCATAACAGCGACACTTAAAAGTCAAACATACATCCAATTATTCAGTACAGTTACTAACGTGTAATCCCCTGTAGATTACTACATTTCCAGCCTCGATCCGAGGTCCAGTAGTAGGAAAACCCTTACTTGATACTTGGTTATGCCCCTCGATCGAGTCCACGCTCAACAGATCCACCTAAACGAAATCACAAGGGTTTAAACGATAACACTAGTAAAAGTCACCTTTTTAAATCATTCGAAACAACAAACGTCGCTTACCCGAGTAAAGGGAGCTGTTCCCAAATGAACTTGTCGTGGGACCCAAGAACTTGAGCGTTAAATCCCTACTACCTTTAAGGAACGAAAGATAGGACCCAGTCTTACTCTAATATTCAAACTCGAAACGGTCATGGCAACATTGGATAAATTACCAAAATGATCCTTACCGAAGACTCACCGTGACCCGAAGTGGAGGGAGAAAAATATGGCTTAGATGGCTCGGCTCGGCTTAGCTCACCCTCAGCTCGCGGCTTGCGGCTCACGGCTCGGTCTTCGGCTTGACTCGGCTTGCGGCTCGGCTCAGTCTTCGGCTCAACTCGGATTTTCGACTTGAATCGCGGGTCGGACTGGAATCGGGTCTCGGGTCGGGTCAGCTTGAAACCAGGGCAACCACGAGCGACGGTCTTCGGCGTTCGACGACGGGGACGCTTCGCGGCTTGGAGGAGTCCGACGACCGGCTCCGCTTCAATGCGGCAGAGAGCGACTGGGCGTCGACGGACACAGTTGGACGAAGGACGCACGGCGGCGTCCGGTTGCGTGAGACCGAGAGAGAGATCGGAGATGGATGGGCTGCGACGAACGAGCGGTGGAGCTGCGAAGTTGCCGACAACGGAGACGGAGACAGAAGTGGAGACGCAAACGGAGGGGAAAAAAGAAAACGAGCGGCGGCGGCGTGA

mRNA sequence

ATGGATTTTAGGCGTTGTAGCCTAGTTAAGGAGGAAAGACAGAGTTACTTTGTAGACTTATGTGGCATGACAGTTGTGTTATCTTATCTTACGTCTAAGGAGCCGGTTGGTACCTTCTGCAATAATAGTGTTCGGCGACACAGAGAGAAAAGGGTTGTGGAGGGTTTCCCTGAAGTGAGGATGTTGATGACTCAAGGGAAAGGGGTTGAAGAAAGGGATCTTGGATTCCCAAAGACCTCGACACGAAGAGTTGCACCTTGGAGTAAAAAAGATAACACGGTGCATTGCCACACGATGAGGCGAGCAACCCAGACGGGTACCCTACGTAAACAGTCTAGTGGTTTCGTAGAACGCACACATCAGTCCCGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCGAAGGATACACCTATCAGTCTAGTGATCCCGAGGGATGCACATATCAGTCTAGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCAAAGGATACACCTATCCCTCGCGGCTTGCGGCTCACGGCTCGGTCTTCGGCTTGACTCGGCTTGCGGCTCGGCTCAGTCTTCGGCTCAACTCGGATTTTCGACTTGAATCGCGGGTCGGACTGGAATCGGGTCTCGGGTCGGGTCAGCTTGAAACCAGGGCAACCACGAGCGACGGTCTTCGGCGTTCGACGACGGGGACGCTTCGCGGCTTGGAGGAGTCCGACGACCGGCTCCGCTTCAATGCGGCAGAGAGCGACTGGGCGTCGACGGACACAGTTGGACGAAGGACGCACGGCGGCGTCCGGTTGCGTGAGACCGAGAGAGAGATCGGAGATGGATGGGCTGCGACGAACGAGCGGTGGAGCTGCGAAGTTGCCGACAACGGAGACGGAGACAGAAGTGGAGACGCAAACGGAGGGGAAAAAAGAAAACGAGCGGCGGCGGCGTGA

Coding sequence (CDS)

ATGGATTTTAGGCGTTGTAGCCTAGTTAAGGAGGAAAGACAGAGTTACTTTGTAGACTTATGTGGCATGACAGTTGTGTTATCTTATCTTACGTCTAAGGAGCCGGTTGGTACCTTCTGCAATAATAGTGTTCGGCGACACAGAGAGAAAAGGGTTGTGGAGGGTTTCCCTGAAGTGAGGATGTTGATGACTCAAGGGAAAGGGGTTGAAGAAAGGGATCTTGGATTCCCAAAGACCTCGACACGAAGAGTTGCACCTTGGAGTAAAAAAGATAACACGGTGCATTGCCACACGATGAGGCGAGCAACCCAGACGGGTACCCTACGTAAACAGTCTAGTGGTTTCGTAGAACGCACACATCAGTCCCGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCGAAGGATACACCTATCAGTCTAGTGATCCCGAGGGATGCACATATCAGTCTAGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCAAAGGATACACCTATCCCTCGCGGCTTGCGGCTCACGGCTCGGTCTTCGGCTTGACTCGGCTTGCGGCTCGGCTCAGTCTTCGGCTCAACTCGGATTTTCGACTTGAATCGCGGGTCGGACTGGAATCGGGTCTCGGGTCGGGTCAGCTTGAAACCAGGGCAACCACGAGCGACGGTCTTCGGCGTTCGACGACGGGGACGCTTCGCGGCTTGGAGGAGTCCGACGACCGGCTCCGCTTCAATGCGGCAGAGAGCGACTGGGCGTCGACGGACACAGTTGGACGAAGGACGCACGGCGGCGTCCGGTTGCGTGAGACCGAGAGAGAGATCGGAGATGGATGGGCTGCGACGAACGAGCGGTGGAGCTGCGAAGTTGCCGACAACGGAGACGGAGACAGAAGTGGAGACGCAAACGGAGGGGAAAAAAGAAAACGAGCGGCGGCGGCGTGA

Protein sequence

MDFRRCSLVKEERQSYFVDLCGMTVVLSYLTSKEPVGTFCNNSVRRHREKRVVEGFPEVRMLMTQGKGVEERDLGFPKTSTRRVAPWSKKDNTVHCHTMRRATQTGTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDGWAATNERWSCEVADNGDGDRSGDANGGEKRKRAAAA
Homology
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BLAST of IVF0021610 vs. ExPASy TrEMBL
Match: A0A5A7TDW4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G001050 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 5.0e-70
Identity = 153/204 (75.00%), Postives = 161/204 (78.92%), Query Frame = 0 

Query: 105 TGTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSD 164
           +GTLRK+SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG TYQSSDPEGCTYQSSD
Sbjct: 206 SGTLRKRSSGSVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGYTYQSSDPEGCTYQSSD 265

Query: 165 PKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDG 224
           P+GYTY S         G T        RLN D RLES+VGLE+GLGSGQLET ATTSDG
Sbjct: 266 PEGYTYQS-----SDPEGYT-----YPHRLNLDLRLESQVGLEAGLGSGQLETGATTSDG 325

Query: 225 LRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREI-GDGWAATN 284
           LRRSTTGTLRGLEESDDRLRFN AESDWAS DTVGRRTHG VRLRETERE    G A T 
Sbjct: 326 LRRSTTGTLRGLEESDDRLRFNVAESDWASADTVGRRTHGDVRLRETEREFENGGTAVTT 385

Query: 285 ERWSCEVADNGDGD----RSGDAN 304
           + WSCE  D+GDGD    R GD +
Sbjct: 386 KSWSCETTDDGDGDGHYHRDGDGD 399

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BLAST of IVF0021610 vs. ExPASy TrEMBL
Match: A0A5A7T8C3 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00020 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.8e-51
Identity = 117/173 (67.63%), Postives = 122/173 (70.52%), Query Frame = 0 

Query: 106 GTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDP 165
           GTLRKQSSG + RTHQSRDPEGCTYQSSDPEGYTYQ SDPEGCTYQSSDPEGCTYQSSD 
Sbjct: 17  GTLRKQSSGSIVRTHQSRDPEGCTYQSSDPEGYTYQFSDPEGCTYQSSDPEGCTYQSSDL 76

Query: 166 KGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGL 225
           +GYTYP                                        SGQLETRATTSD L
Sbjct: 77  EGYTYP----------------------------------------SGQLETRATTSDDL 136

Query: 226 RRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG 279
           RRS TGTLRGLEE DDRL FNAAE +WASTDTVGRRT GGVR+RE ER+IGDG
Sbjct: 137 RRSMTGTLRGLEEFDDRLCFNAAERNWASTDTVGRRTDGGVRVREIERKIGDG 149

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BLAST of IVF0021610 vs. ExPASy TrEMBL
Match: A0A5A7UVY7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold160G00130 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.8e-43
Identity = 109/166 (65.66%), Postives = 120/166 (72.29%), Query Frame = 0 

Query: 110 KQSSGFVERTHQSRDPEGCTYQSSDPEGYTY----------QSSDPEGCTYQSSDPEGCT 169
           ++SSG VERTHQSRDPEGCTYQSSDPEGYTY          QSSDPEGC YQSSDPEGCT
Sbjct: 183 RKSSGSVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGYTSQSSDPEGCRYQSSDPEGCT 242

Query: 170 YQSSDPKGYTYP-SRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESG------LGS 229
           YQSSDP+GYTYP    ++   +  L    A LS   +++   ++  GL         LGS
Sbjct: 243 YQSSDPEGYTYPLDPRSSSRKIPYLILGYAPLSSPRSTNPPKQNHKGLNDDTNWKRVLGS 302

Query: 230 GQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTV 259
           GQLET ATTSDGLRRSTTGTL GLEESDDRLRFNAAE DWASTDTV
Sbjct: 303 GQLETGATTSDGLRRSTTGTLCGLEESDDRLRFNAAEHDWASTDTV 348

[Close]
BLAST of IVF0021610 vs. ExPASy TrEMBL
Match: A0A5A7TTZ4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001010 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.0e-31
Identity = 96/176 (54.55%), Postives = 107/176 (60.80%), Query Frame = 0 

Query: 82  RRVAPWSKKDNTVH---CHTMRRATQTG-------TLRKQSSGFVERTHQSRDPEGCTYQ 141
           R +  W+   N  H    H++R     G       T +  SSG VERTHQSRDPEGCTYQ
Sbjct: 233 RIIKCWNSNPNLPHRVVSHSLRMRYAIGCWVDDLATQKALSSGSVERTHQSRDPEGCTYQ 292

Query: 142 SSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVF------GLTR 201
           SSDPE  TYQSSDPEGCTYQSSDPEGCTYQSSDP+G TY S     G  +      G T 
Sbjct: 293 SSDPEECTYQSSDPEGCTYQSSDPEGCTYQSSDPEGCTYQSS-DPKGCTYQSSDPKGCTY 352

Query: 202 LAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDD 242
            ++          R      + S L SGQLET ATTSDGLRRSTTGTLRGLEES +
Sbjct: 353 QSSDPEGYTYPFNRGSDLKRVSSRLESGQLETGATTSDGLRRSTTGTLRGLEESGE 407

[Close]
BLAST of IVF0021610 vs. ExPASy TrEMBL
Match: A0A5D3CEY7 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00740 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-28
Identity = 89/168 (52.98%), Postives = 101/168 (60.12%), Query Frame = 0 

Query: 112 SSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTY- 171
           SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDP GCTYQSSDP G TY 
Sbjct: 12  SSGSVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPRGCTYQSSDPGGCTYQ 71

Query: 172 PSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTT 231
           PS   + G  +    L+   S     +  + S +   +G    +LE R    +    ST 
Sbjct: 72  PS--DSEGYTYHKGELSTIKSAAEPENLSVNSLLPSRNGRSLRKLEMR----ERWGWSTA 131

Query: 232 GTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG 279
              R           +  +S WAS DTVGRR HGGV LRETER +  G
Sbjct: 132 ARPR-----------DVTKSGWASADTVGRRAHGGVWLRETERGLEMG 162

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BLAST of IVF0021610 vs. NCBI nr
Match: KAA0039625.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 278 bits (710), Expect = 1.65e-87
Identity = 150/194 (77.32%), Postives = 158/194 (81.44%), Query Frame = 0 

Query: 105 TGTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSD 164
           +GTLRK+SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG TYQSSDPEGCTYQSSD
Sbjct: 206 SGTLRKRSSGSVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGYTYQSSDPEGCTYQSSD 265

Query: 165 PKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDG 224
           P+GYTY S         G T        RLN D RLES+VGLE+GLGSGQLET ATTSDG
Sbjct: 266 PEGYTYQS-----SDPEGYT-----YPHRLNLDLRLESQVGLEAGLGSGQLETGATTSDG 325

Query: 225 LRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDGWAA-TN 284
           LRRSTTGTLRGLEESDDRLRFN AESDWAS DTVGRRTHG VRLRETERE  +G  A T 
Sbjct: 326 LRRSTTGTLRGLEESDDRLRFNVAESDWASADTVGRRTHGDVRLRETEREFENGGTAVTT 385

Query: 285 ERWSCEVADNGDGD 297
           + WSCE  D+GDGD
Sbjct: 386 KSWSCETTDDGDGD 389

[Close]
BLAST of IVF0021610 vs. NCBI nr
Match: KAA0037851.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (545), Expect = 5.91e-66
Identity = 117/173 (67.63%), Postives = 122/173 (70.52%), Query Frame = 0 

Query: 106 GTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDP 165
           GTLRKQSSG + RTHQSRDPEGCTYQSSDPEGYTYQ SDPEGCTYQSSDPEGCTYQSSD 
Sbjct: 17  GTLRKQSSGSIVRTHQSRDPEGCTYQSSDPEGYTYQFSDPEGCTYQSSDPEGCTYQSSDL 76

Query: 166 KGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGL 225
           +GYTYPS                                        GQLETRATTSD L
Sbjct: 77  EGYTYPS----------------------------------------GQLETRATTSDDL 136

Query: 226 RRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG 278
           RRS TGTLRGLEE DDRL FNAAE +WASTDTVGRRT GGVR+RE ER+IGDG
Sbjct: 137 RRSMTGTLRGLEEFDDRLCFNAAERNWASTDTVGRRTDGGVRVREIERKIGDG 149

[Close]
BLAST of IVF0021610 vs. NCBI nr
Match: KAA0060052.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (476), Expect = 2.11e-51
Identity = 109/166 (65.66%), Postives = 118/166 (71.08%), Query Frame = 0 

Query: 110 KQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG----------CTYQSSDPEGCT 169
           ++SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG          C YQSSDPEGCT
Sbjct: 183 RKSSGSVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGYTSQSSDPEGCRYQSSDPEGCT 242

Query: 170 YQSSDPKGYTYPSRLAAHGSVFGLTRLA-ARLSLRLNSDFRLESRVGLESG------LGS 229
           YQSSDP+GYTYP    +         L  A LS   +++   ++  GL         LGS
Sbjct: 243 YQSSDPEGYTYPLDPRSSSRKIPYLILGYAPLSSPRSTNPPKQNHKGLNDDTNWKRVLGS 302

Query: 230 GQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTV 258
           GQLET ATTSDGLRRSTTGTL GLEESDDRLRFNAAE DWASTDTV
Sbjct: 303 GQLETGATTSDGLRRSTTGTLCGLEESDDRLRFNAAEHDWASTDTV 348

[Close]
BLAST of IVF0021610 vs. NCBI nr
Match: KAA0045596.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (371), Expect = 5.94e-37
Identity = 97/174 (55.75%), Postives = 106/174 (60.92%), Query Frame = 0 

Query: 87  WSKKDNTVH---CHTMRRATQTG-------TLRKQSSGFVERTHQSRDPEGCTYQSSDPE 146
           W+   N  H    H++R     G       T +  SSG VERTHQSRDPEGCTYQSSDPE
Sbjct: 238 WNSNPNLPHRVVSHSLRMRYAIGCWVDDLATQKALSSGSVERTHQSRDPEGCTYQSSDPE 297

Query: 147 GYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVF------GLTRLAA-- 206
             TYQSSDPEGCTYQSSDPEGCTYQSSDP+G TY S     G  +      G T  ++  
Sbjct: 298 ECTYQSSDPEGCTYQSSDPEGCTYQSSDPEGCTYQSS-DPKGCTYQSSDPKGCTYQSSDP 357

Query: 207 ---RLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTTGTLRGLEES 239
                     SD +  S     S L SGQLET ATTSDGLRRSTTGTLRGLEES
Sbjct: 358 EGYTYPFNRGSDLKRVS-----SRLESGQLETGATTSDGLRRSTTGTLRGLEES 405

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BLAST of IVF0021610 vs. NCBI nr
Match: TYK08879.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (354), Expect = 9.96e-37
Identity = 88/165 (53.33%), Postives = 99/165 (60.00%), Query Frame = 0 

Query: 112 SSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTY- 171
           SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDP GCTYQSSDP G TY 
Sbjct: 12  SSGSVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPRGCTYQSSDPGGCTYQ 71

Query: 172 PSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTT 231
           PS   + G  +    L+   S     +  + S +   +G    +LE R         ST 
Sbjct: 72  PSD--SEGYTYHKGELSTIKSAAEPENLSVNSLLPSRNGRSLRKLEMRERWG----WSTA 131

Query: 232 GTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREI 275
              R +            +S WAS DTVGRR HGGV LRETER +
Sbjct: 132 ARPRDV-----------TKSGWASADTVGRRAHGGVWLRETERGL 159

The following BLAST results are available for this feature:
BLAST of IVF0021610 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0021610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TDW45.0e-7075.00Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G001050 P... [more]
A0A5A7T8C36.8e-5167.63NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7UVY76.8e-4365.66Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold160G0013... [more]
A0A5A7TTZ46.0e-3154.55NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3CEY71.3e-2852.98NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of IVF0021610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0039625.11.65e-8777.32pol protein [Cucumis melo var. makuwa][more]
KAA0037851.15.91e-6667.63NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0060052.12.11e-5165.66gag/pol protein [Cucumis melo var. makuwa][more]
KAA0045596.15.94e-3755.75NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
TYK08879.19.96e-3753.33NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
BLAST of IVF0021610 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..314

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021610.1IVF0021610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome