IVF0021586 (gene) Melon (IVF77) v1

Overview
NameIVF0021586
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 24205155 .. 24205609 (-)
RNA-Seq ExpressionIVF0021586
SyntenyIVF0021586
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATTATTTGAGTTCATCAAAGTGGAAGCTGCGTTCTTCGCCTTTCCCGGCCGGTGGTTGTTGGCTCCTGCCCCGCCGGCGCCGGACCTTCCCCCTTTAGCCTTTAAAACAGTCCAACTCTCCGCCGTCTTATTATTCTCTTCTTTGCCACGGCCTCCTTTCACTCCAAACCCAAAAGAAAAAAAAGAAAAAATTAAATAATTAAGGAACAAATTAATCCATTAATTAATTAGTTATTAGGATTCCTCATCATTCACGGATTTCATAATCTTAAATAACAAAAGTAAATGTTTGAAATAATTTTATTTTAATTTTGCAGAACTTTCTGAAAAAATAAATAAACAAAATAGTTATTGAATGGAACCTTAATTTTAAACCTCAACAAAAAAATTGTTAGTTAGTATCAAAGTCAAGACATATATGATGAAATAAAAAATAATATCAAATTCCAT

mRNA sequence

ATGTTATTATTTGAGTTCATCAAAGTGGAAGCTGCGTTCTTCGCCTTTCCCGGCCGGTGGTTGTTGGCTCCTGCCCCGCCGGCGCCGGACCTTCCCCCTTTAGCCTTTAAAACAGTCCAACTCTCCGCCGTCTTATTATTCTCTTCTTTGCCACGGCCTCCTTTCACTCCAAACCCAAAAGAAAAAAAAGAAAAAATTAAATAATTAAGGAACAAATTAATCCATTAATTAATTAGTTATTAGGATTCCTCATCATTCACGGATTTCATAATCTTAAATAACAAAAGTAAATGTTTGAAATAATTTTATTTTAATTTTGCAGAACTTTCTGAAAAAATAAATAAACAAAATAGTTATTGAATGGAACCTTAATTTTAAACCTCAACAAAAAAATTGTTAGTTAGTATCAAAGTCAAGACATATATGATGAAATAAAAAATAATATCAAATTCCAT

Coding sequence (CDS)

ATGTTATTATTTGAGTTCATCAAAGTGGAAGCTGCGTTCTTCGCCTTTCCCGGCCGGTGGTTGTTGGCTCCTGCCCCGCCGGCGCCGGACCTTCCCCCTTTAGCCTTTAAAACAGTCCAACTCTCCGCCGTCTTATTATTCTCTTCTTTGCCACGGCCTCCTTTCACTCCAAACCCAAAAGAAAAAAAAGAAAAAATTAAATAA

Protein sequence

MLLFEFIKVEAAFFAFPGRWLLAPAPPAPDLPPLAFKTVQLSAVLLFSSLPRPPFTPNPKEKKEKIK
Homology
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BLAST of IVF0021586 vs. ExPASy TrEMBL
Match: A0A0A0L9M0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710770 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.6e-20
Identity = 57/62 (91.94%), Postives = 58/62 (93.55%), Query Frame = 0 

Query: 1  MLLFEFIKVEAAFFAFPGRWLLAPAPPAPDL-PPLAFKTVQLS-AVLLFSSLPRPPFTPN 60
          MLLFEFIKVEAAFFAFPGRWLLAPAPPAPDL PPLAF+TVQLS AVLLFSSLP PPFTPN
Sbjct: 1  MLLFEFIKVEAAFFAFPGRWLLAPAPPAPDLPPPLAFETVQLSAAVLLFSSLPPPPFTPN 60

The following BLAST results are available for this feature:
BLAST of IVF0021586 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0021586 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9M08.6e-2091.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710770 PE=4 SV=1[more]
BLAST of IVF0021586 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of IVF0021586 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021586.1IVF0021586.1mRNA