IVF0021503 (gene) Melon (IVF77) v1

Overview


Name	IVF0021503
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-H2 finger protein ATL74
Location	chr08: 24795006 .. 24795712 (-)
RNA-Seq Expression	IVF0021503
Synteny	IVF0021503

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCCATTCTTTTAATGTCCATTTCTTCTCAAAATACCCACCACAGACCCACCAAAAATGTTCAAGATCCACCGCCACTTCACGGCAGCGCCACCACCGTTTCCAGCCGAGACGAATCTCGGCAACAACATGGTGATCGGCTTAGCAGCTCTGCTCTATGCCCTCATTGGCGCACTCGTCGTGAACTCAATTATCCGCTGCGTGTGGCGGCGGTGGTGGAGCGCCGCAGCAAGAGTCGAGAGGCAGGAATTGGAAGCGATTCCGGTGGCGGTTTTTGAAGGCGAAGGGAGAATGAGAATGAGAGGTACGGAATGTGCGATTTGTTTAGGTGAATTTGAAAGTGGTGAGGATTTGAGGATTTTGCCCCAATGTAACCATGGATTTCACGTTCACTGCATTGATGCTTGGCTTGTTTCCCATTCCTCTTGCCCAAATTGTCGCCATTCTGTGCCACTGAAGACGGTAGGGGATGGTGGCAGTGGCGGAATTAGTGAGCTGCGGCGGCCGGGGAATCATCGGACCCACACCGGGCAGTTGTCCGATGATATAATTATTATACTTATTGCAGCCATTTAGAAGTGGATGGATGAAGGTAATTGGCAATGGGCATATCATATGTACATTCTTCTTTGGATGGAAGTTTTAATTAATCTCCACTACTTTTGTAGTTATATTGTAGGTTTTAAGGATAAGCAGCACTTTGGAG

mRNA sequence

CTTCCCATTCTTTTAATGTCCATTTCTTCTCAAAATACCCACCACAGACCCACCAAAAATGTTCAAGATCCACCGCCACTTCACGGCAGCGCCACCACCGTTTCCAGCCGAGACGAATCTCGGCAACAACATGGTGATCGGCTTAGCAGCTCTGCTCTATGCCCTCATTGGCGCACTCGTCGTGAACTCAATTATCCGCTGCGTGTGGCGGCGGTGGTGGAGCGCCGCAGCAAGAGTCGAGAGGCAGGAATTGGAAGCGATTCCGGTGGCGGTTTTTGAAGGCGAAGGGAGAATGAGAATGAGAGGTACGGAATGTGCGATTTGTTTAGGTGAATTTGAAAGTGGTGAGGATTTGAGGATTTTGCCCCAATGTAACCATGGATTTCACGTTCACTGCATTGATGCTTGGCTTGTTTCCCATTCCTCTTGCCCAAATTGTCGCCATTCTGTGCCACTGAAGACGGTAGGGGATGGTGGCAGTGGCGGAATTAGTGAGCTGCGGCGGCCGGGGAATCATCGGACCCACACCGGGCAGTTGTCCGATGATATAATTATTATACTTATTGCAGCCATTTAGAAGTGGATGGATGAAGTTATATTGTAGGTTTTAAGGATAAGCAGCACTTTGGAG

Coding sequence (CDS)

ATGTTCAAGATCCACCGCCACTTCACGGCAGCGCCACCACCGTTTCCAGCCGAGACGAATCTCGGCAACAACATGGTGATCGGCTTAGCAGCTCTGCTCTATGCCCTCATTGGCGCACTCGTCGTGAACTCAATTATCCGCTGCGTGTGGCGGCGGTGGTGGAGCGCCGCAGCAAGAGTCGAGAGGCAGGAATTGGAAGCGATTCCGGTGGCGGTTTTTGAAGGCGAAGGGAGAATGAGAATGAGAGGTACGGAATGTGCGATTTGTTTAGGTGAATTTGAAAGTGGTGAGGATTTGAGGATTTTGCCCCAATGTAACCATGGATTTCACGTTCACTGCATTGATGCTTGGCTTGTTTCCCATTCCTCTTGCCCAAATTGTCGCCATTCTGTGCCACTGAAGACGGTAGGGGATGGTGGCAGTGGCGGAATTAGTGAGCTGCGGCGGCCGGGGAATCATCGGACCCACACCGGGCAGTTGTCCGATGATATAATTATTATACTTATTGCAGCCATTTAG

Protein sequence

MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARVERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI

Homology

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BLAST of IVF0021503 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-29
Identity = 69/128 (53.91%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 15  FPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWW----SAA-------ARVERQ 74
           +  + N   NMVI LAALL ALI AL +NSI+RC  R  +    SAA       A ++++
Sbjct: 24  YTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVADRAGLKKR 83

Query: 75  ELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSS 132
           EL+  PVA + G G +++  TECAICLGEF  GE +R+LP CNH FH+ CID WLVSHSS
Sbjct: 84  ELKKFPVAEY-GSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSS 143

[Close]

BLAST of IVF0021503 vs. ExPASy Swiss-Prot
Match: Q9SG96 (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.6e-27
Identity = 68/138 (49.28%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 18  ETNLGNNMVIGLAALLYALIGALVVNSIIRCV---WRRWWS------------------A 77
           +T    NMVI LAALL ALI AL +NS +RCV    RR+ S                  A
Sbjct: 26  DTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAA 85

Query: 78  AARVERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDA 135
           A  +++Q L+ IPV ++ G G + M+ TEC ICLG+FE GE +R+LP+CNHGFHV CID 
Sbjct: 86  ATGLKKQALKQIPVGLY-GSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDT 145

[Close]

BLAST of IVF0021503 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 20  NLGNNMVIGLAALLYALIGALVVNSIIRCV---WRRWW----------SAAARVERQELE 79
           ++  +MVI LAALL ALI AL +NS++RCV    RR+           + A  ++++ L+
Sbjct: 36  SMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKRALK 95

Query: 80  AIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSCPN 132
            IPV  +  E  ++M+ TEC ICLG+F  GE +R+LP+CNHGFHV CID WL+SHSSCP 
Sbjct: 96  VIPVDSYSPE--LKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPT 155

[Close]

BLAST of IVF0021503 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-23
Identity = 60/163 (36.81%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 9   TAAPPPFPAETNLG--NNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAA-------R 68
           TAAPPP P+E  +   ++MV+ L+ALL ALI    + +++RC W R ++A          
Sbjct: 10  TAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKG 69

Query: 69  VERQELEAIPVAVF------EGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHC 128
           ++++ L+++P + F       G        TECAICL +F  GE++R+LP C H FHV C
Sbjct: 70  LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129

Query: 129 IDAWLVSHSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTH 157
           ID WLVS SSCP+CR  +        G    +E++   +   H
Sbjct: 130 IDKWLVSRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQH 172

[Close]

BLAST of IVF0021503 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.2e-23
Identity = 59/139 (42.45%), Postives = 80/139 (57.55%), Query Frame = 0


Query: 14  PFPAETN----LGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAAR---------- 73
           P PA  N    L +++V+ LAALL ALI  L + ++ RCVW R  +A  R          
Sbjct: 15  PSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSP 74

Query: 74  ----------VERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGF 129
                     ++++ L+++P   F  E     +  ECAICL EF +G++LR+LPQC HGF
Sbjct: 75  QPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGF 134

[Close]

BLAST of IVF0021503 vs. ExPASy TrEMBL
Match: A0A5D3CEJ5 (RING-H2 finger protein ATL74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00540 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 2.9e-96
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV 60
           MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV
Sbjct: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV 60

Query: 61  ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS 120
           ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS
Sbjct: 61  ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS 120

Query: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 173
           HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI
Sbjct: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of IVF0021503 vs. ExPASy TrEMBL
Match: A0A1S3CKD5 (RING-H2 finger protein ATL74 OS=Cucumis melo OX=3656 GN=LOC103501464 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 2.9e-96
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV 60
           MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV
Sbjct: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV 60

Query: 61  ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS 120
           ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS
Sbjct: 61  ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS 120

Query: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 173
           HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI
Sbjct: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of IVF0021503 vs. ExPASy TrEMBL
Match: A0A5A7SL64 (RING-H2 finger protein ATL74 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00400 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.2e-94
Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV 60
           MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWW AAARV
Sbjct: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWRAAARV 60

Query: 61  ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS 120
           ERQELE IPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILP+CNHGFHVHCIDAWLVS
Sbjct: 61  ERQELEEIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPRCNHGFHVHCIDAWLVS 120

Query: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 173
           HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI
Sbjct: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of IVF0021503 vs. ExPASy TrEMBL
Match: A0A0A0L057 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G333870 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.2e-68
Identity = 130/162 (80.25%), Postives = 143/162 (88.27%), Query Frame = 0


Query: 12  PPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWS-AAARVERQELEAIPV 71
           PP FPA T L NNMVI LAALLYAL+GALV+NSI+RC+WRRWWS AAARVERQELE IPV
Sbjct: 25  PPAFPAHTTLDNNMVILLAALLYALVGALVMNSILRCIWRRWWSAAAARVERQELEEIPV 84

Query: 72  AVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSCPNCRHS 131
           AV+EGEGRM++RGTECAICLGEFESGE LRI+P+CNHGFHVHCIDAWLVSHSSCPNCRHS
Sbjct: 85  AVYEGEGRMKIRGTECAICLGEFESGEGLRIMPKCNHGFHVHCIDAWLVSHSSCPNCRHS 144

Query: 132 VPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 173
           +P+KTV DGGSGG+ E+RR GN        SDDIIIILIAAI
Sbjct: 145 LPVKTVADGGSGGVGEVRRAGNDG------SDDIIIILIAAI 180

[Close]

BLAST of IVF0021503 vs. ExPASy TrEMBL
Match: A0A6J1CR99 (RING-H2 finger protein ATL74-like OS=Momordica charantia OX=3673 GN=LOC111013867 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.9e-47
Identity = 115/183 (62.84%), Postives = 130/183 (71.04%), Query Frame = 0


Query: 1   MFKIHRHFTAAPPPFPAET---NLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWW--- 60
           MF+I R F A PP  P+ T   NL  N+VI LAALL AL+GAL VNSI+RCV RR W   
Sbjct: 1   MFQISRRFPALPPSPPSNTSEKNLDFNVVIVLAALLCALVGALAVNSILRCVARRRWGEL 60

Query: 61  ----SAAARVERQ-ELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGF 120
               +A A V+R+ ELE IPVAVF G    R+RGTECAICLGEFE G+DLRILP C+HGF
Sbjct: 61  SRESAALAGVKRRGELEEIPVAVFAGAAEGRIRGTECAICLGEFEIGDDLRILPNCSHGF 120

Query: 121 HVHCIDAWLVSHSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILI 173
           HV+CID W VSHSSCPNCRHS+  KT  DGG G   E+RRP N    +GQL  D IIILI
Sbjct: 121 HVNCIDHWFVSHSSCPNCRHSLLQKTAEDGGGG---EVRRPEN--PDSGQLPGD-IIILI 177

[Close]

BLAST of IVF0021503 vs. NCBI nr
Match: XP_008463261.1 (PREDICTED: RING-H2 finger protein ATL74 [Cucumis melo] >TYK09770.1 RING-H2 finger protein ATL74 [Cucumis melo var. makuwa])

HSP 1 Score: 358 bits (919), Expect = 6.38e-125
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV 60
           MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV
Sbjct: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV 60

Query: 61  ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS 120
           ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS
Sbjct: 61  ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS 120

Query: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172
           HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI
Sbjct: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of IVF0021503 vs. NCBI nr
Match: KAA0025403.1 (RING-H2 finger protein ATL74 [Cucumis melo var. makuwa])

HSP 1 Score: 353 bits (905), Expect = 8.71e-123
Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAARV 60
           MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWW AAARV
Sbjct: 1   MFKIHRHFTAAPPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWRAAARV 60

Query: 61  ERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVS 120
           ERQELE IPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILP+CNHGFHVHCIDAWLVS
Sbjct: 61  ERQELEEIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPRCNHGFHVHCIDAWLVS 120

Query: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172
           HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI
Sbjct: 121 HSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172

[Close]

BLAST of IVF0021503 vs. NCBI nr
Match: XP_011653722.1 (RING-H2 finger protein ATL74 isoform X1 [Cucumis sativus] >KGN54449.1 hypothetical protein Csa_012932 [Cucumis sativus])

HSP 1 Score: 266 bits (681), Expect = 1.61e-88
Identity = 130/162 (80.25%), Postives = 143/162 (88.27%), Query Frame = 0


Query: 12  PPPFPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAA-RVERQELEAIPV 71
           PP FPA T L NNMVI LAALLYAL+GALV+NSI+RC+WRRWWSAAA RVERQELE IPV
Sbjct: 25  PPAFPAHTTLDNNMVILLAALLYALVGALVMNSILRCIWRRWWSAAAARVERQELEEIPV 84

Query: 72  AVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSCPNCRHS 131
           AV+EGEGRM++RGTECAICLGEFESGE LRI+P+CNHGFHVHCIDAWLVSHSSCPNCRHS
Sbjct: 85  AVYEGEGRMKIRGTECAICLGEFESGEGLRIMPKCNHGFHVHCIDAWLVSHSSCPNCRHS 144

Query: 132 VPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172
           +P+KTV DGGSGG+ E+RR GN        SDDIIIILIAAI
Sbjct: 145 LPVKTVADGGSGGVGEVRRAGNDG------SDDIIIILIAAI 180

[Close]

BLAST of IVF0021503 vs. NCBI nr
Match: XP_022144089.1 (RING-H2 finger protein ATL74-like [Momordica charantia])

HSP 1 Score: 196 bits (498), Expect = 1.02e-60
Identity = 111/181 (61.33%), Postives = 128/181 (70.72%), Query Frame = 0


Query: 1   MFKIHRHFTAAPPPFPAET---NLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWW--- 60
           MF+I R F A PP  P+ T   NL  N+VI LAALL AL+GAL VNSI+RCV RR W   
Sbjct: 1   MFQISRRFPALPPSPPSNTSEKNLDFNVVIVLAALLCALVGALAVNSILRCVARRRWGEL 60

Query: 61  ----SAAARVERQ-ELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGF 120
               +A A V+R+ ELE IPVAVF G    R+RGTECAICLGEFE G+DLRILP C+HGF
Sbjct: 61  SRESAALAGVKRRGELEEIPVAVFAGAAEGRIRGTECAICLGEFEIGDDLRILPNCSHGF 120

Query: 121 HVHCIDAWLVSHSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILI 170
           HV+CID W VSHSSCPNCRHS+  KT  DGG G   E+RRP N    +GQL  DIII++ 
Sbjct: 121 HVNCIDHWFVSHSSCPNCRHSLLQKTAEDGGGG---EVRRPEN--PDSGQLPGDIIILIA 176

[Close]

BLAST of IVF0021503 vs. NCBI nr
Match: KAG6744375.1 (hypothetical protein POTOM_053095 [Populus tomentosa])

HSP 1 Score: 142 bits (359), Expect = 5.20e-39
Identity = 79/168 (47.02%), Postives = 105/168 (62.50%), Query Frame = 0


Query: 18  ETNLGNNMVIGLAALLYALIGALVVNSIIRCVWR--------RWWSAAARV-----ERQE 77
           ETN   NMVI LAALL ALIGAL +NSI+RC+ R            AA+R+     ++++
Sbjct: 31  ETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEEAASRLAATGLKKRD 90

Query: 78  LEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSC 137
           L  IPVA++   G +    TEC ICLGEF  GE +R+LP+CNHGFHV CID WL+SHSSC
Sbjct: 91  LRQIPVAIYGAGGSIA--ATECPICLGEFVDGEKVRVLPKCNHGFHVSCIDTWLLSHSSC 150

Query: 138 PNCRHSVPLKTVGDGGSGGISELRRPGNHRTHTGQLSDDIIIILIAAI 172
           PNCRHS+   T   G +  ++E  RPG +      + DD+  +  A++
Sbjct: 151 PNCRHSLLEHTTDSGAAQEVTEATRPGENDPGRQVILDDLTSMTNASV 196

[Close]

BLAST of IVF0021503 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-30
Identity = 69/128 (53.91%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 15  FPAETNLGNNMVIGLAALLYALIGALVVNSIIRCVWRRWW----SAA-------ARVERQ 74
           +  + N   NMVI LAALL ALI AL +NSI+RC  R  +    SAA       A ++++
Sbjct: 24  YTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVADRAGLKKR 83

Query: 75  ELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSS 132
           EL+  PVA + G G +++  TECAICLGEF  GE +R+LP CNH FH+ CID WLVSHSS
Sbjct: 84  ELKKFPVAEY-GSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSS 143

[Close]

BLAST of IVF0021503 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-28
Identity = 68/138 (49.28%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 18  ETNLGNNMVIGLAALLYALIGALVVNSIIRCV---WRRWWS------------------A 77
           +T    NMVI LAALL ALI AL +NS +RCV    RR+ S                  A
Sbjct: 26  DTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAA 85

Query: 78  AARVERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDA 135
           A  +++Q L+ IPV ++ G G + M+ TEC ICLG+FE GE +R+LP+CNHGFHV CID 
Sbjct: 86  ATGLKKQALKQIPVGLY-GSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDT 145

[Close]

BLAST of IVF0021503 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-27
Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 20  NLGNNMVIGLAALLYALIGALVVNSIIRCV---WRRWW----------SAAARVERQELE 79
           ++  +MVI LAALL ALI AL +NS++RCV    RR+           + A  ++++ L+
Sbjct: 36  SMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKRALK 95

Query: 80  AIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHCIDAWLVSHSSCPN 132
            IPV  +  E  ++M+ TEC ICLG+F  GE +R+LP+CNHGFHV CID WL+SHSSCP 
Sbjct: 96  VIPVDSYSPE--LKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPT 155

[Close]

BLAST of IVF0021503 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 111.3 bits (277), Expect = 7.7e-25
Identity = 60/163 (36.81%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 9   TAAPPPFPAETNLG--NNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAA-------R 68
           TAAPPP P+E  +   ++MV+ L+ALL ALI    + +++RC W R ++A          
Sbjct: 10  TAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKG 69

Query: 69  VERQELEAIPVAVF------EGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGFHVHC 128
           ++++ L+++P + F       G        TECAICL +F  GE++R+LP C H FHV C
Sbjct: 70  LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129

Query: 129 IDAWLVSHSSCPNCRHSVPLKTVGDGGSGGISELRRPGNHRTH 157
           ID WLVS SSCP+CR  +        G    +E++   +   H
Sbjct: 130 IDKWLVSRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQH 172

[Close]

BLAST of IVF0021503 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 6.6e-24
Identity = 59/139 (42.45%), Postives = 80/139 (57.55%), Query Frame = 0


Query: 14  PFPAETN----LGNNMVIGLAALLYALIGALVVNSIIRCVWRRWWSAAAR---------- 73
           P PA  N    L +++V+ LAALL ALI  L + ++ RCVW R  +A  R          
Sbjct: 15  PSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSP 74

Query: 74  ----------VERQELEAIPVAVFEGEGRMRMRGTECAICLGEFESGEDLRILPQCNHGF 129
                     ++++ L+++P   F  E     +  ECAICL EF +G++LR+LPQC HGF
Sbjct: 75  QPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGF 134

The following BLAST results are available for this feature:

BLAST of IVF0021503 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZV8	3.9e-29	53.91	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]
Q9SG96	3.6e-27	49.28	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1	[more]
Q9FLC6	1.2e-25	48.80	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]
O22755	1.1e-23	36.81	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9LM69	9.2e-23	42.45	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]

BLAST of IVF0021503 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CEJ5	2.9e-96	100.00	RING-H2 finger protein ATL74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CKD5	2.9e-96	100.00	RING-H2 finger protein ATL74 OS=Cucumis melo OX=3656 GN=LOC103501464 PE=4 SV=1	[more]
A0A5A7SL64	1.2e-94	98.26	RING-H2 finger protein ATL74 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0L057	1.2e-68	80.25	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G333870 P...	[more]
A0A6J1CR99	1.9e-47	62.84	RING-H2 finger protein ATL74-like OS=Momordica charantia OX=3673 GN=LOC111013867...	[more]

BLAST of IVF0021503 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463261.1	6.38e-125	100.00	PREDICTED: RING-H2 finger protein ATL74 [Cucumis melo] >TYK09770.1 RING-H2 finge...	[more]
KAA0025403.1	8.71e-123	98.26	RING-H2 finger protein ATL74 [Cucumis melo var. makuwa]	[more]
XP_011653722.1	1.61e-88	80.25	RING-H2 finger protein ATL74 isoform X1 [Cucumis sativus] >KGN54449.1 hypothetic...	[more]
XP_022144089.1	1.02e-60	61.33	RING-H2 finger protein ATL74-like [Momordica charantia]	[more]
KAG6744375.1	5.20e-39	47.02	hypothetical protein POTOM_053095 [Populus tomentosa]	[more]

BLAST of IVF0021503 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01880.1	2.7e-30	53.91	RING/U-box superfamily protein	[more]
AT3G10910.1	2.6e-28	49.28	RING/U-box superfamily protein	[more]
AT5G05280.1	8.3e-27	48.80	RING/U-box superfamily protein	[more]
AT2G17450.1	7.7e-25	36.81	RING-H2 finger A3A	[more]
AT1G20823.1	6.6e-24	42.45	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 86..127 e-value: 8.7E-7 score: 38.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 85..128 e-value: 1.1E-14 score: 54.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 86..128 score: 11.972923
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 51..134 e-value: 8.9E-22 score: 78.6
None	No IPR available	PANTHER	PTHR45798:SF44	RING-H2 FINGER PROTEIN ATL74	coord: 17..135
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 17..135
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 85..128 e-value: 1.96395E-18 score: 72.3345
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 85..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021503.2	IVF0021503.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane