IVF0021465 (gene) Melon (IVF77) v1

Overview
NameIVF0021465
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr10: 18257953 .. 18258564 (+)
RNA-Seq ExpressionIVF0021465
SyntenyIVF0021465
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAAACTAGATTCGAAAGGGTGGCAAATAAAGCCCAACAAAAGATGGAGAAAGTTAGGATTGGGCTTCTTAAAATTAAGGTAAAGGCATAAAGTGTTAAGGTCTTAGTCGAATGAAAGAAAAAAACTAAGTTGAGGGAGCAAGAAGAGCTCCTCAACAAAGCAGATAAATTGGCCCTCTTCATGGAGAAGGGTAAAGAAAAAGAAAATACATTCGAGGAATTTTGCGAGGAGTTTGAGAAGGATATAGAAGAATTGAATCCTTAAGAGGACAACAAGGAGATAAGACCTGCAAAAAAGAGAGAGGTTACAATGAAAAAGGTCTTGAGAGAACAATTTGCCAAGAGGCGAGAAGAAAAGGAAAGAAGAGGTCCTCAGAAAGAGAGTGAAAAAGAGGACGAGCAAAGCGAAAAGGAAGGGTCCCTCTCCGAGAGACACGTTAGCGTACTGTTCATGATAGAGAAAGGACTCTACATTTACATGGGGAACATGCCTGAATTTCTTGTAGCACCCATCAGAGCATTAAGATGGAAGAGGTTTTTTCAAGAAGTGATTGGGATAAGACCTGGCATAGTAAATTTATTTTACAAAGGCTATATTAATGCATAG

mRNA sequence

ATGGTGGAAACTAGATTCGAAAGGGTGGCAAATAAAGCCCAACAAAAGATGGAGAAAGTTAGGATTGGGCTTCTTAAAATTAAGAAAAAAACTAAGTTGAGGGAGCAAGAAGAGCTCCTCAACAAAGCAGATAAATTGGCCCTCTTCATGGAGAAGGGTAAAGAAAAAGAAAATACATTCGAGGAATTTTGCGAGGAACCTGCAAAAAAGAGAGAGGTTACAATGAAAAAGGTCTTGAGAGAACAATTTGCCAAGAGGCGAGAAGAAAAGGAAAGAAGAGGTCCTCAGAAAGAGAGTGAAAAAGAGGACGAGCAAAGCGAAAAGGAAGGGTCCCTCTCCGAGAGACACGTTAGCGTACTGTTCATGATAGAGAAAGGACTCTACATTTACATGGGGAACATGCCTGAATTTCTTGTAGCACCCATCAGAGCATTAAGATGGAAGAGGTTTTTTCAAGAAGTGATTGGGATAAGACCTGGCATAGTAAATTTATTTTACAAAGGCTATATTAATGCATAG

Coding sequence (CDS)

ATGGTGGAAACTAGATTCGAAAGGGTGGCAAATAAAGCCCAACAAAAGATGGAGAAAGTTAGGATTGGGCTTCTTAAAATTAAGAAAAAAACTAAGTTGAGGGAGCAAGAAGAGCTCCTCAACAAAGCAGATAAATTGGCCCTCTTCATGGAGAAGGGTAAAGAAAAAGAAAATACATTCGAGGAATTTTGCGAGGAACCTGCAAAAAAGAGAGAGGTTACAATGAAAAAGGTCTTGAGAGAACAATTTGCCAAGAGGCGAGAAGAAAAGGAAAGAAGAGGTCCTCAGAAAGAGAGTGAAAAAGAGGACGAGCAAAGCGAAAAGGAAGGGTCCCTCTCCGAGAGACACGTTAGCGTACTGTTCATGATAGAGAAAGGACTCTACATTTACATGGGGAACATGCCTGAATTTCTTGTAGCACCCATCAGAGCATTAAGATGGAAGAGGTTTTTTCAAGAAGTGATTGGGATAAGACCTGGCATAGTAAATTTATTTTACAAAGGCTATATTAATGCATAG

Protein sequence

MVETRFERVANKAQQKMEKVRIGLLKIKKKTKLREQEELLNKADKLALFMEKGKEKENTFEEFCEEPAKKREVTMKKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNMPEFLVAPIRALRWKRFFQEVIGIRPGIVNLFYKGYINA
Homology
BLAST of IVF0021465 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 9.5e-39
Identity = 113/178 (63.48%), Postives = 124/178 (69.66%), Query Frame = 0

Query: 1   MVETRFERVANKAQQKMEKVRIGLLKI-------------KKKTKLREQEELLNKADKLA 60
           MV+T FERV NKAQ+K EKVR  LLKI             KK+ KLR+ EELLNK DKLA
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 61  LFMEKGKEKENTFEEF------------------CEEPAKKREVTM-KKVLREQFAKRRE 120
           L +EKGKEKE TFEEF                   E PAKKR VTM KKVLR+QFAKRR+
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120

Query: 121 EKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNMPEFLVAPIRALR 147
           EK+RRGPQKESEKE E+SEKEGSLSERHVS+LFM EKGLY Y  NM +FL APIR  R
Sbjct: 121 EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR 178

BLAST of IVF0021465 vs. ExPASy TrEMBL
Match: A0A5D3DZF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001640 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 3.1e-37
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0

Query: 75  MKKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNM 134
           MKKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNM
Sbjct: 1   MKKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNM 60

Query: 135 PEFLVAPIRALRWKRFFQEVIGIRPGIVN 164
           PEFLVAPIRALRWKRFFQEVIGIRPGI N
Sbjct: 61  PEFLVAPIRALRWKRFFQEVIGIRPGIDN 89

BLAST of IVF0021465 vs. ExPASy TrEMBL
Match: A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18
Identity = 80/179 (44.69%), Postives = 107/179 (59.78%), Query Frame = 0

Query: 16  KMEKVRI-GLLKIKKKTKLREQEELLNKADKLALFMEKGKEKENTFEEFCEE-------- 75
           K+ KV +    + K+  K+    ELLNKA+K+ L ++K K K+ T E +C+E        
Sbjct: 11  KVHKVNVHSPFERKEGNKVEGAGELLNKAEKITLSVKKDKAKK-TSEAYCDELEKELEDL 70

Query: 76  ----------PAKKREVTMK-KVLREQFAKRREEKERRGPQKE---SEKEDEQSEKEGSL 135
                     P+KKR+VTMK KVL +QFA R+EEKE++GP  E    E+ED++SE E  L
Sbjct: 71  SPSEDEEVVKPSKKRKVTMKMKVLSKQFADRQEEKEKKGPHIEDIKEEEEDQESEMEKPL 130

Query: 136 SERHVSVLFMIEKGLYIYMGNMPEFLVAPIRALRWKRFFQEVIGIRPGIVNLFYKGYIN 172
           S   VS  FMIEK LY + G M  FL +PIRA    +FF+ V  IR  + NLFYKGYI+
Sbjct: 131 SANEVSKQFMIEKRLYPFKGIMLAFLASPIRAFSQGKFFKGVTTIRADVKNLFYKGYIS 188

BLAST of IVF0021465 vs. ExPASy TrEMBL
Match: A0A5A7T5Y0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00580 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.0e-17
Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 0

Query: 109 EGSLSERHVSVLFMIEKGLYIYMGNMPEFLVAPIRALRWKRFFQEVIGIRPGIVNLFYKG 168
           E  LS + VS LF++EKGLYIY G MPEFL +PIRAL+WKRFFQ V  IRPG+V+LFY+G
Sbjct: 2   EEPLSAKRVSKLFIVEKGLYIYRGTMPEFLTSPIRALKWKRFFQGVNAIRPGVVDLFYRG 61

Query: 169 YINA 173
           YINA
Sbjct: 62  YINA 65

BLAST of IVF0021465 vs. ExPASy TrEMBL
Match: A0A5D3BAP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00500 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.0e-17
Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 0

Query: 109 EGSLSERHVSVLFMIEKGLYIYMGNMPEFLVAPIRALRWKRFFQEVIGIRPGIVNLFYKG 168
           E  LS + VS LF++EKGLYIY G MPEFL +PIRAL+WKRFFQ V  IRPG+V+LFY+G
Sbjct: 2   EEPLSAKRVSKLFIVEKGLYIYRGTMPEFLASPIRALKWKRFFQGVNAIRPGVVDLFYRG 61

Query: 169 YINA 173
           YINA
Sbjct: 62  YINA 65

BLAST of IVF0021465 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 170 bits (431), Expect = 1.56e-50
Identity = 113/178 (63.48%), Postives = 125/178 (70.22%), Query Frame = 0

Query: 1   MVETRFERVANKAQQKMEKVRIGLLKIK-------------KKTKLREQEELLNKADKLA 60
           MV+T FERV NKAQ+K EKVR  LLKIK             K+ KLR+ EELLNK DKLA
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 61  LFMEKGKEKENTFEEFCEE------------------PAKKREVTMKK-VLREQFAKRRE 120
           L +EKGKEKE TFEEF +E                  PAKKR VTMKK VLR+QFAKRR+
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120

Query: 121 EKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNMPEFLVAPIRALR 146
           EK+RRGPQKESEKE E+SEKEGSLSERHVS+LFM EKGLY Y  NM +FL APIR  R
Sbjct: 121 EKKRRGPQKESEKEVERSEKEGSLSERHVSILFMREKGLYPYKRNMSQFLEAPIRVFR 178

BLAST of IVF0021465 vs. NCBI nr
Match: TYK29046.1 (hypothetical protein E5676_scaffold120G001640 [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (420), Expect = 1.29e-49
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0

Query: 75  MKKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNM 134
           MKKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNM
Sbjct: 1   MKKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNM 60

Query: 135 PEFLVAPIRALRWKRFFQEVIGIRPGIVN 163
           PEFLVAPIRALRWKRFFQEVIGIRPGI N
Sbjct: 61  PEFLVAPIRALRWKRFFQEVIGIRPGIDN 89

BLAST of IVF0021465 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 104 bits (259), Expect = 2.21e-23
Identity = 75/156 (48.08%), Postives = 97/156 (62.18%), Query Frame = 0

Query: 38  ELLNKADKLALFMEKGKEKENTFEEFCEE------------------PAKKREVTMK-KV 97
           ELLNKA+K+ L ++K K K+ T E +C+E                  P+KKR+VTMK KV
Sbjct: 34  ELLNKAEKITLSVKKDKAKK-TSEAYCDELEKELEDLSPSEDEEVVKPSKKRKVTMKMKV 93

Query: 98  LREQFAKRREEKERRGPQKES---EKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNMP 157
           L +QFA R+EEKE++GP  E    E+ED++SE E  LS   VS  FMIEK LY + G M 
Sbjct: 94  LSKQFADRQEEKEKKGPHIEDIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPFKGIML 153

Query: 158 EFLVAPIRALRWKRFFQEVIGIRPGIVNLFYKGYIN 171
            FL +PIRA    +FF+ V  IR  + NLFYKGYI+
Sbjct: 154 AFLASPIRAFSQGKFFKGVTTIRADVKNLFYKGYIS 188

BLAST of IVF0021465 vs. NCBI nr
Match: KAA0064202.1 (hypothetical protein E6C27_scaffold548G001440 [Cucumis melo var. makuwa] >TYK02826.1 hypothetical protein E5676_scaffold218G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 8.51e-22
Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 0

Query: 76  KKVLREQFAKRREEKERRGPQKESEKEDEQSEKEGSLSERHVSVLFMIEKGLYIYMGNMP 135
           KK L+EQF K ++EK +R PQ    +E ++S+ E  LS   VS  FMIEKGLY Y   MP
Sbjct: 3   KKTLKEQFRKWQDEKAKRKPQNNEGEEGKESDSEKPLSFTKVSKQFMIEKGLYPYQRAMP 62

Query: 136 EFLVAPIRALRWKRFFQEVIGIRPGIVNLFYKGYIN 171
            FL  PI+A +WKRFFQ VI I P +V +FYKGYIN
Sbjct: 63  GFLTIPIQAFKWKRFFQGVIAIIPDVVKMFYKGYIN 98

BLAST of IVF0021465 vs. NCBI nr
Match: TYJ96034.1 (hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.22e-21
Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 0

Query: 109 EGSLSERHVSVLFMIEKGLYIYMGNMPEFLVAPIRALRWKRFFQEVIGIRPGIVNLFYKG 168
           E  LS + VS LF++EKGLYIY G MPEFL +PIRAL+WKRFFQ V  IRPG+V+LFY+G
Sbjct: 2   EEPLSAKRVSKLFIVEKGLYIYRGTMPEFLASPIRALKWKRFFQGVNAIRPGVVDLFYRG 61

Query: 169 YINA 172
           YINA
Sbjct: 62  YINA 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TGV49.5e-3963.48Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009... [more]
A0A5D3DZF03.1e-3798.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DQE55.4e-1844.69Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00... [more]
A0A5A7T5Y06.0e-1770.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BAP96.0e-1770.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0041276.11.56e-5063.48protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu... [more]
TYK29046.11.29e-4998.88hypothetical protein E5676_scaffold120G001640 [Cucumis melo var. makuwa][more]
TYK25886.12.21e-2348.08protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0064202.18.51e-2255.21hypothetical protein E6C27_scaffold548G001440 [Cucumis melo var. makuwa] >TYK028... [more]
TYJ96034.11.22e-2170.31hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021465.2IVF0021465.2mRNA