IVF0021380 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAAAATTCTAAAAAAATTTCTAGTAGAACACTTGATTCTAATTCTTCTTCATCTTATGATAATTCTGTTAAAGAACAAGTGAATTTACTAACTAAACTTTTTGCTTCTTTTGTGAAGGGGGAGGTTCCTAAAGTTGTCTCTTGTGGAGTCTGTGGCTTGCTAGGCCACCACAATGATCAATGCCCAAAGATTAAAGAGGTAAGTGCCATGGGAGGTTATAGAAGAAAGGATAAACAGAATAACACATACAACTTTGGATGGAGGGACGATCCAAATCTTAGTTGCGTCCCTTAAGAACCAAAACCTACCAACATTTCTTCTTCCTCATCATCAACACAAGGTACGTACTTAGAGGAGATCATCTCCAAGTTAACTCTTAGCTTAAATAGTTTTAAAACTAATTTTGAGAAAAACATAGTTAAGTTCATTAAGCAAATTATTAATTCAACTGGAGCCATGAAAAATGATATAGAAACCATGAAAGCATCCATTTTCGAGTTATGAGATAAGCTTAATCAATTAGCAATACACGTTCTTAAAACAAAAGGGAAAGACAAACTTTCCGCCCAACCCAACCATGCGAATGCGAGTGCTATTACTTTAAGAAGTGACAAAATTTTGAATAAGAATGATGATGTCCCTTTGTCTCAAAATGATCATAACTTACAGAATGTTGATTCAAATGCCAAAGAAGAAAAGAAGGTACAAACTAACACCTTTTTTCTAATGCTTCTTCTTCTAATAATGATTCAAAGTACATTGTTGATAATATTCTATCTCCATTTCCTTCTATGTTATCTCAACCAAGGAAGGAATTCAAGAATGACGAAGAACTCCTTGAAGTCTTCAAGAAGGTAGAAGTAAACTTACCCCTCTTGACGACAATCAAGAGCATACCAAGGTATGCAAAGTTTTTTAAGGAGTTATGTACTCACAAGAGGAGGAGTAGGAGCCAAGAAAAAGTAATGGTTAGTAAAAATGTGTCTTCCCTTTTAAAGAAGAATCTTCTAGTAAAATGTGTCGACCTAGGTATCTTTTCGCTCCCTTGAACAATAGGAAATTTAGACATATCTAGTGTAATACTTGATCTAGGTTCATCCATTAATGTCATGCATTTTAGCGTTGTTAAAGACTTCAGATTGAATGGACTTGAAAAGACTAGTATTTATATACACTTAGCCAATCGATCTTTCATTTCACCATTACGGGTTGTAGAAGATGTCCTAGTTAAGGTAGAAAATCTAATGTTCCAATGCGGATTTTTACATAATGGAAACGAATAATGAATATGCACGTACATCTCCTACCATACTTTTAGGAAGATCATTCTTGAAAATTGCTATGGCCATAATTAATGTGGAGAAAGGTCTTCTTGGTGTCGAGTTTGATGGTGATATAATGTCTTTCAACATTTTTTATGATGTAAAGTCCTCTAATGATCATGTTTCATTATGTACACTTGATACTTTAGAATCATTAAAGACACTAGAAGAGCATGATAAATTAATGAGATTATTGATCAAACAACTTTAGAATATGTTGAAAATGATCTTAATTTTGAGATTTTAGATGGATTTAATAATTATTTTGTTCATGAGAACCTTGATGAAAGATTTGACATGATTGACAATTCTCTAGATAATCGTGTATAATGACTTGAACTTTTAAATTAAGTTAAGGTCATTACTCAAAAAGACAAATAACAAATTACACTTCCTTGAAGAGACAAACGACTAAAATTCTTATAAAATCAGATCTTCACAAAATGTAAGATTATCAAAACCAACAAAAATAATTTGAAAAAATGACCCGCGGGTTCTAACAATTTTAAAAAAAATAAAAATAAATAGGTCAAAATTTTAAGTAAAATGTTAAAAATTTAAAATACTAAAAAAACACTTAAATAGACGTGAAAGCTAGCTATTTCCCCTTATGGCATGCCACGGATTCCTTTCTATCGCTCACCGGCTTCTCAAGTTCTCTACCTTAGCCTAAAATATTAAACATAGAAAAGAGTGAGTATATAAATATACCCAGTAAGACCCACTACTGGTCCCGCTAA ATGGCCAAAAATTCTAAAAAAATTTCTAGTAGAACACTTGATTCTAATTCTTCTTCATCTTATGATAATTCTGTTAAAGAACAAGTGAATTTACTAACTAAACTTTTTGCTTCTTTTGTGAAGGGGGAGGTTCCTAAAGTTGTCTCTTGTGGAGTCTGTGGCTTGCTAGGCCACCACAATGATCAATGCCCAAAGATTAAAGAGGTAAGTGCCATGGGAGGTTATAGAAGAAAGGATAAACAGAATAACACATACAACTTTGGATGGAGGGACGATCCAAATCTTAGTACGTACTTAGAGGAGATCATCTCCAAGTTAACTCTTAGCTTAAATAGTTTTAAAACTAATTTTGAGAAAAACATAGTTAAGTTCATTAAGCAAATTATTAATTCAACTGGACTTAATCAATTAGCAATACACGTTCTTAAAACAAAAGGGAAAGACAAACTTTCCGCCCAACCCAACCATGCGAATGCGAGTGCTATTACTTTAAGAAGTGACAAAATTTTGAATAAGAATGATGATGTCCCTTTTAAGACCCACTACTGGTCCCGCTAA ATGGCCAAAAATTCTAAAAAAATTTCTAGTAGAACACTTGATTCTAATTCTTCTTCATCTTATGATAATTCTGTTAAAGAACAAGTGAATTTACTAACTAAACTTTTTGCTTCTTTTGTGAAGGGGGAGGTTCCTAAAGTTGTCTCTTGTGGAGTCTGTGGCTTGCTAGGCCACCACAATGATCAATGCCCAAAGATTAAAGAGGTAAGTGCCATGGGAGGTTATAGAAGAAAGGATAAACAGAATAACACATACAACTTTGGATGGAGGGACGATCCAAATCTTAGTACGTACTTAGAGGAGATCATCTCCAAGTTAACTCTTAGCTTAAATAGTTTTAAAACTAATTTTGAGAAAAACATAGTTAAGTTCATTAAGCAAATTATTAATTCAACTGGACTTAATCAATTAGCAATACACGTTCTTAAAACAAAAGGGAAAGACAAACTTTCCGCCCAACCCAACCATGCGAATGCGAGTGCTATTACTTTAAGAAGTGACAAAATTTTGAATAAGAATGATGATGTCCCTTTTAAGACCCACTACTGGTCCCGCTAA MAKNSKKISSRTLDSNSSSSYDNSVKEQVNLLTKLFASFVKGEVPKVVSCGVCGLLGHHNDQCPKIKEVSAMGGYRRKDKQNNTYNFGWRDDPNLSTYLEEIISKLTLSLNSFKTNFEKNIVKFIKQIINSTGLNQLAIHVLKTKGKDKLSAQPNHANASAITLRSDKILNKNDDVPFKTHYWSR Homology
BLAST of IVF0021380 vs. ExPASy TrEMBL
Match: A0A0A0KEQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G295940 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 2.1e-52 Identity = 116/191 (60.73%), Postives = 132/191 (69.11%), Query Frame = 0
BLAST of IVF0021380 vs. ExPASy TrEMBL
Match: A0A5D3CW21 (Retrovirus-related Pol polyprotein from transposon 297 family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00170 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 2.0e-34 Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of IVF0021380 vs. ExPASy TrEMBL
Match: A0A5D3CB46 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00170 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21 Identity = 74/191 (38.74%), Postives = 101/191 (52.88%), Query Frame = 0
BLAST of IVF0021380 vs. ExPASy TrEMBL
Match: A0A5A7U6X0 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00210 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 7.4e-21 Identity = 66/159 (41.51%), Postives = 85/159 (53.46%), Query Frame = 0
BLAST of IVF0021380 vs. ExPASy TrEMBL
Match: A0A5A7V0Q7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00020 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 3.7e-20 Identity = 72/191 (37.70%), Postives = 100/191 (52.36%), Query Frame = 0
BLAST of IVF0021380 vs. NCBI nr
Match: KAE8647060.1 (hypothetical protein Csa_022980 [Cucumis sativus]) HSP 1 Score: 243 bits (621), Expect = 5.26e-72 Identity = 133/216 (61.57%), Postives = 152/216 (70.37%), Query Frame = 0
BLAST of IVF0021380 vs. NCBI nr
Match: KAA0042324.1 (Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] >TYK15448.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]) HSP 1 Score: 155 bits (393), Expect = 5.38e-42 Identity = 77/95 (81.05%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of IVF0021380 vs. NCBI nr
Match: TYK07549.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 114 bits (285), Expect = 4.16e-27 Identity = 74/190 (38.95%), Postives = 100/190 (52.63%), Query Frame = 0
BLAST of IVF0021380 vs. NCBI nr
Match: KAA0051064.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 1.09e-26 Identity = 66/158 (41.77%), Postives = 84/158 (53.16%), Query Frame = 0
BLAST of IVF0021380 vs. NCBI nr
Match: TYK29265.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 108 bits (271), Expect = 6.35e-26 Identity = 72/190 (37.89%), Postives = 98/190 (51.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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