IVF0021367 (gene) Melon (IVF77) v1

Overview
NameIVF0021367
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationchr08: 30737479 .. 30738027 (+)
RNA-Seq ExpressionIVF0021367
SyntenyIVF0021367
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTGGTTGATGAGCAAGGGGCAGCAACGAAGTCCTTTCAGGACATTGAAAGGCTTACTTTGGGTTTCTTTGATGTTCTTTACAAAAGGATTCCAGGGGACAGATTCATTCCATTTATCACTCACTGGCCTTGCCTCACCCCCAATCAAAATACGCTACTTGTTACCCGATTCTCAGATGAAGAAATCTTCAAGGAAGTAAAGGCTCTCGGAAGAAACAAAGCTCTAGGTCCGGATGGATTTACCACGGATTTCCTTGTTAAGCATTGGCCTAAGCTCATGTGCAGTTTTAAAAATCTGCTTGATAACTTTCACAGTAATAGAAGGTTAAATGCTTGTATCCAAGAAAACTTCATCTGTTTGATACAAAAGAAGGAAGAAGCAGTCCACGTTAAAGATTTCAGACCTATCAGTCTCGCTACCCTAACCTACAAGGTGGTGGCCAAAGTTTTAGCGGAACATTTGAAACTGGTTATGGACTCGATCATAGGTCCACTCCAAAGTGCATTCATTGAAGGAAGGCAAATTCCAGATTTTAATAGCTAA

mRNA sequence

ATGAAGTTGGTTGATGAGCAAGGGGCAGCAACGAAGTCCTTTCAGGACATTGAAAGGCTTACTTTGGGTTTCTTTGATGTTCTTTACAAAAGGATTCCAGGGGACAGATTCATTCCATTTATCACTCACTGGCCTTGCCTCACCCCCAATCAAAATACGCTACTTGTTACCCGATTCTCAGATGAAGAAATCTTCAAGGAAGTAAAGGCTCTCGGAAGAAACAAAGCTCTAGGTCCGGATGGATTTACCACGGATTTCCTTGTTAAGCATTGGCCTAAGCTCATGTGCAGTTTTAAAAATCTGCTTGATAACTTTCACAGTAATAGAAGGTTAAATGCTTGTATCCAAGAAAACTTCATCTGTTTGATACAAAAGAAGGAAGAAGCAGTCCACGTTAAAGATTTCAGACCTATCAGTCTCGCTACCCTAACCTACAAGGTGGTGGCCAAAGTTTTAGCGGAACATTTGAAACTGGTTATGGACTCGATCATAGGTCCACTCCAAAGTGCATTCATTGAAGGAAGGCAAATTCCAGATTTTAATAGCTAA

Coding sequence (CDS)

ATGAAGTTGGTTGATGAGCAAGGGGCAGCAACGAAGTCCTTTCAGGACATTGAAAGGCTTACTTTGGGTTTCTTTGATGTTCTTTACAAAAGGATTCCAGGGGACAGATTCATTCCATTTATCACTCACTGGCCTTGCCTCACCCCCAATCAAAATACGCTACTTGTTACCCGATTCTCAGATGAAGAAATCTTCAAGGAAGTAAAGGCTCTCGGAAGAAACAAAGCTCTAGGTCCGGATGGATTTACCACGGATTTCCTTGTTAAGCATTGGCCTAAGCTCATGTGCAGTTTTAAAAATCTGCTTGATAACTTTCACAGTAATAGAAGGTTAAATGCTTGTATCCAAGAAAACTTCATCTGTTTGATACAAAAGAAGGAAGAAGCAGTCCACGTTAAAGATTTCAGACCTATCAGTCTCGCTACCCTAACCTACAAGGTGGTGGCCAAAGTTTTAGCGGAACATTTGAAACTGGTTATGGACTCGATCATAGGTCCACTCCAAAGTGCATTCATTGAAGGAAGGCAAATTCCAGATTTTAATAGCTAA

Protein sequence

MKLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPDFNS
Homology
BLAST of IVF0021367 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.3e-11
Identity = 40/135 (29.63%), Postives = 68/135 (50.37%), Query Frame = 0

Query: 45  PCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDN 104
           P ++  +   L T  + +E+ + ++ +  NK+ G DG T +F    W  L   F  +L  
Sbjct: 435 PVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTE 494

Query: 105 FHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSII 164
                 L    +   + L+ KK +   +K++RP+SL +  YK+VAK ++  LK V+  +I
Sbjct: 495 AFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVI 554

Query: 165 GPLQSAFIEGRQIPD 180
            P QS  + GR I D
Sbjct: 555 HPDQSYTVPGRTIFD 569

BLAST of IVF0021367 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.7e-09
Identity = 41/135 (30.37%), Postives = 64/135 (47.41%), Query Frame = 0

Query: 43  HWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLL 102
           H P L+  +  +L    S  EI   ++ L + K+ GPDGFT++F      +L+    NL 
Sbjct: 436 HLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLF 495

Query: 103 DNFHSNRRLNACIQENFICLIQKK-EEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMD 162
            N      L     E  I LI K  ++    +++RPISL  +  K++ K+L   ++  + 
Sbjct: 496 QNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIK 555

Query: 163 SIIGPLQSAFIEGRQ 177
            II   Q  FI G Q
Sbjct: 556 KIIHHDQVGFIPGSQ 570

BLAST of IVF0021367 vs. ExPASy TrEMBL
Match: A0A5D3E0C0 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00520 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.4e-64
Identity = 124/168 (73.81%), Postives = 138/168 (82.14%), Query Frame = 0

Query: 12  KSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKAL 71
           KSF DIERL  GFFDV Y+RIP DRFIPFIT+WPC T +QN LLVT FS++EI K VKAL
Sbjct: 2   KSFWDIERLIFGFFDVQYRRIPRDRFIPFITYWPCATLSQNALLVTCFSNDEICKPVKAL 61

Query: 72  GRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVH 131
           GRNKA   DGFT DFLV +WPKL CS KNLLD+FH+N R NAC++ENFICLIQKKE+ +H
Sbjct: 62  GRNKAPSSDGFTADFLVMNWPKLKCSSKNLLDDFHNNGRSNACVRENFICLIQKKEDVIH 121

Query: 132 VKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD 180
           VKDFR ISL  LTYKVVA VLA+ LK VMDSIIGP Q AFI+GRQI D
Sbjct: 122 VKDFRLISLTALTYKVVANVLAKRLKQVMDSIIGPFQRAFIKGRQILD 169

BLAST of IVF0021367 vs. ExPASy TrEMBL
Match: A0A5A7UWP4 (Transposon TX1 uncharacterized OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00230 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.9e-38
Identity = 83/125 (66.40%), Postives = 98/125 (78.40%), Query Frame = 0

Query: 51   QNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRR 110
            +N  LVT+F  EEIFK +KALG NKA GP+GF  +FL+K+W      FK+L+D+FH N R
Sbjct: 888  KNVALVTQFLVEEIFKALKALGSNKAPGPNGFIAEFLIKYWSNFKDIFKSLMDDFHINGR 947

Query: 111  LNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSA 170
            LNA IQENFICL+QKKE A  VKDF PISL TLTYKVVAKVL++ LK VMD+II P+QSA
Sbjct: 948  LNAYIQENFICLVQKKESATLVKDFHPISLTTLTYKVVAKVLSKRLKQVMDAIISPIQSA 1007

Query: 171  FIEGR 176
            F EGR
Sbjct: 1008 FTEGR 1012

BLAST of IVF0021367 vs. ExPASy TrEMBL
Match: A0A5A7T695 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00690 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 7.0e-32
Identity = 76/170 (44.71%), Postives = 105/170 (61.76%), Query Frame = 0

Query: 2   KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSD 61
           +LV++Q   T S+ +IE L L F+ +LY + P     P   +W  L+ +QN  L +  S 
Sbjct: 27  ELVNDQEVPTSSYVEIEGLILDFYRLLYTKAPQPGHFPSPLNWAVLSNDQNKSLTSELSV 86

Query: 62  EEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFIC 121
           EEI   +K LGR+K  G DGFT  FL+K W KL   F +L   F++N +LNACI ENFIC
Sbjct: 87  EEIKSALKMLGRSKVPGLDGFTPAFLIKVWDKLKSDFHSLFKEFYANGKLNACIMENFIC 146

Query: 122 LIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAF 172
           LI+KKE+ + VKD RPISL TLTYK+V K   + L+    +++  L+  F
Sbjct: 147 LIKKKEDDLEVKDCRPISLTTLTYKLVEKYWLKDLRRSSQALLTLLKVPF 196

BLAST of IVF0021367 vs. ExPASy TrEMBL
Match: A0A5D3CSY0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00110 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30
Identity = 85/153 (55.56%), Postives = 94/153 (61.44%), Query Frame = 0

Query: 27  VLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDF 86
           VLYKR  GDRFIP IT WPC+TP+QN LLVTRFSDEEIFK VKAL      GP       
Sbjct: 113 VLYKR-NGDRFIPLITGWPCVTPSQNALLVTRFSDEEIFKTVKALVLE---GP------- 172

Query: 87  LVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYK 146
                                    NAC +   +   +KKE+A  VKDFRPISL TL+YK
Sbjct: 173 -------------------------NACPKNFHLSNTEKKEDATFVKDFRPISLTTLSYK 229

Query: 147 VVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD 180
           +VAKVLAE LK VMDSI+ P QSAFIEGRQI D
Sbjct: 233 MVAKVLAECLKQVMDSIVSPFQSAFIEGRQILD 229

BLAST of IVF0021367 vs. ExPASy TrEMBL
Match: A0A5A7TIB8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00430 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.4e-24
Identity = 65/178 (36.52%), Postives = 96/178 (53.93%), Query Frame = 0

Query: 2   KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSD 61
           K+++  G    +  DI    +  F+ +Y      +       W  ++     LL   F++
Sbjct: 199 KVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNLDWCPISNTNRCLLDKPFNE 258

Query: 62  EEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFIC 121
            EI+  +K+  +NKA GPDGFT DFL K W  +  +  ++  +FHSN  +N  + E  I 
Sbjct: 259 SEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSNHTINKVVNETLIT 318

Query: 122 LIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD 180
           LI KK+    V DFRPISL T  YK++AKVLA+ LK  +   I  LQ AF++GRQI +
Sbjct: 319 LIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTLPYTISELQMAFVKGRQITE 376

BLAST of IVF0021367 vs. NCBI nr
Match: KAA0043278.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK29342.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 249 bits (635), Expect = 3.60e-81
Identity = 124/168 (73.81%), Postives = 138/168 (82.14%), Query Frame = 0

Query: 12  KSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKAL 71
           KSF DIERL  GFFDV Y+RIP DRFIPFIT+WPC T +QN LLVT FS++EI K VKAL
Sbjct: 2   KSFWDIERLIFGFFDVQYRRIPRDRFIPFITYWPCATLSQNALLVTCFSNDEICKPVKAL 61

Query: 72  GRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVH 131
           GRNKA   DGFT DFLV +WPKL CS KNLLD+FH+N R NAC++ENFICLIQKKE+ +H
Sbjct: 62  GRNKAPSSDGFTADFLVMNWPKLKCSSKNLLDDFHNNGRSNACVRENFICLIQKKEDVIH 121

Query: 132 VKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD 179
           VKDFR ISL  LTYKVVA VLA+ LK VMDSIIGP Q AFI+GRQI D
Sbjct: 122 VKDFRLISLTALTYKVVANVLAKRLKQVMDSIIGPFQRAFIKGRQILD 169

BLAST of IVF0021367 vs. NCBI nr
Match: KAA0059514.1 (Transposon TX1 uncharacterized [Cucumis melo var. makuwa])

HSP 1 Score: 163 bits (413), Expect = 7.83e-43
Identity = 83/125 (66.40%), Postives = 98/125 (78.40%), Query Frame = 0

Query: 51   QNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRR 110
            +N  LVT+F  EEIFK +KALG NKA GP+GF  +FL+K+W      FK+L+D+FH N R
Sbjct: 888  KNVALVTQFLVEEIFKALKALGSNKAPGPNGFIAEFLIKYWSNFKDIFKSLMDDFHINGR 947

Query: 111  LNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSA 170
            LNA IQENFICL+QKKE A  VKDF PISL TLTYKVVAKVL++ LK VMD+II P+QSA
Sbjct: 948  LNAYIQENFICLVQKKESATLVKDFHPISLTTLTYKVVAKVLSKRLKQVMDAIISPIQSA 1007

Query: 171  FIEGR 175
            F EGR
Sbjct: 1008 FTEGR 1012

BLAST of IVF0021367 vs. NCBI nr
Match: XP_038905468.1 (probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Benincasa hispida])

HSP 1 Score: 153 bits (386), Expect = 3.43e-39
Identity = 77/125 (61.60%), Postives = 97/125 (77.60%), Query Frame = 0

Query: 55  LVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNAC 114
           LV+RF+  +I + VK LGRNKA GPDGFT +F++K W  L  + K++ D F+ N +LN+C
Sbjct: 3   LVSRFNLAKIKEAVKLLGRNKAPGPDGFTIEFILKFWDLLKDNLKSIFDEFYRNGKLNSC 62

Query: 115 IQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEG 174
           I+ENF+CLIQKK E V VKDFRPIS +T+ YK++AKVLAE LK VM S+I P QSAFIEG
Sbjct: 63  IKENFVCLIQKKSEEVLVKDFRPISPSTIIYKIIAKVLAERLKKVMPSLISPTQSAFIEG 122

Query: 175 RQIPD 179
           RQI D
Sbjct: 123 RQILD 127

BLAST of IVF0021367 vs. NCBI nr
Match: KAA0038378.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ97016.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (354), Expect = 1.70e-38
Identity = 76/170 (44.71%), Postives = 105/170 (61.76%), Query Frame = 0

Query: 2   KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSD 61
           +LV++Q   T S+ +IE L L F+ +LY + P     P   +W  L+ +QN  L +  S 
Sbjct: 27  ELVNDQEVPTSSYVEIEGLILDFYRLLYTKAPQPGHFPSPLNWAVLSNDQNKSLTSELSV 86

Query: 62  EEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFIC 121
           EEI   +K LGR+K  G DGFT  FL+K W KL   F +L   F++N +LNACI ENFIC
Sbjct: 87  EEIKSALKMLGRSKVPGLDGFTPAFLIKVWDKLKSDFHSLFKEFYANGKLNACIMENFIC 146

Query: 122 LIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAF 171
           LI+KKE+ + VKD RPISL TLTYK+V K   + L+    +++  L+  F
Sbjct: 147 LIKKKEDDLEVKDCRPISLTTLTYKLVEKYWLKDLRRSSQALLTLLKVPF 196

BLAST of IVF0021367 vs. NCBI nr
Match: TYK14532.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 138 bits (348), Expect = 1.27e-35
Identity = 85/153 (55.56%), Postives = 94/153 (61.44%), Query Frame = 0

Query: 27  VLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDF 86
           VLYKR  GDRFIP IT WPC+TP+QN LLVTRFSDEEIFK VKAL      GP       
Sbjct: 113 VLYKR-NGDRFIPLITGWPCVTPSQNALLVTRFSDEEIFKTVKALVLE---GP------- 172

Query: 87  LVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYK 146
                                    NAC +   +   +KKE+A  VKDFRPISL TL+YK
Sbjct: 173 -------------------------NACPKNFHLSNTEKKEDATFVKDFRPISLTTLSYK 229

Query: 147 VVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD 179
           +VAKVLAE LK VMDSI+ P QSAFIEGRQI D
Sbjct: 233 MVAKVLAECLKQVMDSIVSPFQSAFIEGRQILD 229

BLAST of IVF0021367 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 33/93 (35.48%), Postives = 45/93 (48.39%), Query Frame = 0

Query: 60  SDEEIFKEVKALGRNKALGPDGFTTDFLVKHW----PKLMCSFKNLLDNFHSNRRLNACI 119
           SD+EI   V A+ RNKA GPD FT +F  + W       + + K      H  +R NA  
Sbjct: 532 SDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNA-- 591

Query: 120 QENFICLIQKKEEAVHVKDFRPISLATLTYKVV 149
               I LI K      +  FRP+S  T+ YK++
Sbjct: 592 --TAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143812.3e-1129.63Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
P085484.7e-0930.37LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3E0C02.4e-6473.81LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7UWP42.9e-3866.40Transposon TX1 uncharacterized OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5A7T6957.0e-3244.71LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3CSY01.3e-3055.56Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold55... [more]
A0A5A7TIB81.4e-2436.52LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
KAA0043278.13.60e-8173.81LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK293... [more]
KAA0059514.17.83e-4366.40Transposon TX1 uncharacterized [Cucumis melo var. makuwa][more]
XP_038905468.13.43e-3961.60probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [... [more]
KAA0038378.11.70e-3844.71LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ970... [more]
TYK14532.11.27e-3555.56reverse transcriptase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT1G43760.11.2e-0735.48DNAse I-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 2..179
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 2..179
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 66..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021367.1IVF0021367.1mRNA