IVF0021305 (gene) Melon (IVF77) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTAACGTGCGTAAGGAGGAGTTTGGAGACAAACTCCACCTTGTCGAGATAACTTTCATCATTTGTATCCCGAAAGAAGAACAAGTGTGGGTTTTAGGCACCGAAAGGCTGTCACCATTAAAAGAGAAGTTTTATAAGTCTTATAAGTGAATGACTAACGTGCGTAAGGAGGAGTTTGGAGACAAACTCCACCTTGTCGAGATAACTTTCATCATTTGTATCCCGAAAGAAGAACAAGTGTGGGTTTTAGGCACCGAAAGGCTGTCACCATTAAAAGAGAAGTTTTATAAGTCTTATAAGTGA ATGACTAACGTGCGTAAGGAGGAGTTTGGAGACAAACTCCACCTTGTCGAGATAACTTTCATCATTTGTATCCCGAAAGAAGAACAAGTGTGGGTTTTAGGCACCGAAAGGCTGTCACCATTAAAAGAGAAGTTTTATAAGTCTTATAAGTGA MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK Homology
BLAST of IVF0021305 vs. ExPASy TrEMBL
Match: A0A5D3C951 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00010 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09 Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 0
BLAST of IVF0021305 vs. ExPASy TrEMBL
Match: A0A5D3CY29 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00960 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.2e-05 Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = 0
BLAST of IVF0021305 vs. ExPASy TrEMBL
Match: A0A5D3DDG5 (Cytochrome b561 and DOMON domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00260 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.4e-05 Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of IVF0021305 vs. ExPASy TrEMBL
Match: A0A5A7V332 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001430 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.3e-04 Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
BLAST of IVF0021305 vs. ExPASy TrEMBL
Match: A0A5D3BHD0 (LINE-1 reverse transcriptase isogeny OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00010 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.8e-04 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 0
BLAST of IVF0021305 vs. NCBI nr
Match: TYK07860.1 (uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 8.96e-14 Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 0
BLAST of IVF0021305 vs. NCBI nr
Match: KAA0032002.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK16823.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 4.00e-09 Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = 0
BLAST of IVF0021305 vs. NCBI nr
Match: KAA0026294.1 (cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa] >TYK21490.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 6.83e-08 Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0
BLAST of IVF0021305 vs. NCBI nr
Match: KAA0062632.1 (uncharacterized protein E6C27_scaffold79G001430 [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 1.27e-07 Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
BLAST of IVF0021305 vs. NCBI nr
Match: TYJ98051.1 (LINE-1 reverse transcriptase isogeny [Cucumis melo var. makuwa]) HSP 1 Score: 53.9 bits (128), Expect = 6.90e-07 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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