IVF0021296 (gene) Melon (IVF77) v1

Overview
NameIVF0021296
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUbiquitin-conjugating enzyme family protein
Locationchr05: 407497 .. 410877 (+)
RNA-Seq ExpressionIVF0021296
SyntenyIVF0021296
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGACACATTCCGACGGCCTTTACACGTTCCAATCGCAAGTTCGTGTACAGCGAGTAAATTTATTATCAACTGATGGTCAGTGTTGGATTCAAAAATCTGAAATCTAATGGTGGGAAATCGAGACCAACGGCCGCAATTGCCTCCGTTAGGTGGGGGAAGATCGTCTTCCTCAATCTCCTTAGCTGCTCCAACTTCATGGGCGTCCACGACCTCGGTCTCTGCTTCGGGCAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTAGACCCGCCTTCCGATTGCTCCGCTGGCCCTAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTTCAGGTAGTTACGACCTTTCACTCTACTCTTTGGGCTTTATCGCTACTTACTCGTACGGTTTTTGGCTTTTGTTCTTCTTTTGCTTTGCCCCATGATTTCTTGCTTCTCAGCCCGATGATTTCTTATGACCGTTAGGATTACACTTTCCTTCAGTGAGCTATTGCACACTCTTTCTTTGTTAAATTTTTTTAGTTTTTGGGCTGGATATTTAACCATCTAAAGATTTGTTGTTTATCTCATTTATTTCGATTCCTGAACGGATGCTCACTGAAACTCTATTGGGGTTTTATTACCTGATTCAAAACATATTCTTTGCCTTCAACTAGCAAATGTTTAATACAAAACAACTCTGAAGAAAGTGTTTGGAGGAGTCAGGAGTGCATGTATCTGCTCCTTCAAGTACTTGGTGTGCTATGCTCCTCTGTCTCATTGTATTTTGTGCAAATAATAAAAGATTAGATTAGTTGCCAAGGAATTAGGACATAAGTTATCACGCGGAGTTAATGGGGTGAGAGTTGGAGAGAAACTACGTTTAGACTAAAGTTGTCTAATCAAAAACAAGTTTTTGATTAAAGTTGTCAGAGCAAGAAGCTGAAAGATCATCAAAAAATACACAAGGTTCTGCCATGGTTTTCCTACGATGTTATACGGTCAATTCTCATCTATATGCTCAATATCAACCAAAAATAGACAAAATGATCGGAGAAGATGCTCTCTGATACCAAAACTCTCAAGGATTTGGAAGAATGTTCTCTTGCTAAATAGCCACACGTCACTGTTGGACACACATATGCTTAAATGAATGAAATGAGTGCATGAAATCTGAGCCAGGATTTCAGGGAGTCATATGTTGCTATTGGTCACTATTAAATTACCTTTCTCCTTTGCATCAAGTGAATTGTTTTATTAAAACAGTGTATTTTATTGGCTTCCTTATTGAGTCTTACTGAATGAATGGGCAGACAAGAGAGAGATTAACCTAGCTCATGCAATTCGTGTGTTGTATTAGTTTATTAGACAAGAAAAAATGCACTGAAGGGCAAAAAGGCATAAGTGATGTTCGTATGGTTCTTTAAAAGGCGGACTATAGAGAGAAAAGCTGTGCTTATGCTGTTTATGCCTGATATTAGTGTTTTAGACAATAACAATACAATAAAGGACAAATGCTGCATAAGTTATGTTTATCTACCATATTGTTTAATGAAGAAAACTTCAGAAAACTTGTCCTAGCGAATCACTTCCTTTTCTTCTCAGGTTTTCTCTCTCTTGCATACTAGACATGCAGTACGAGCCATTTGTCTATAAAGCTGTATTTATTATTGATTATATGAGGGCTTTGTTTGAATACTATCTTGAATATATCAGGAAAAATTGCTGGTAAAATTTATCTAGCTTTTCTCAACAGTAGTGTCTTTGTCTTGTTTTTAGGTACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTTAATCCTCCAAAGGTACTCTTGTTCACATCCTTAAATTTTAGGATTCAAAAACCAAATTTTCTTTTACCCTCATCACGAGAATCAAATGGTCATTCTTGACCTGACACTACGTTTTTGAGTTTTATGCTCATGTTTATTTACCAAGAAGGATTTGGTCTGCAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTTGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACAATCGCAAAGGTGTTAATTGCAGTGAAATCAATTTTCGTAAATCCCAACCCTTGTGAGTCGCCTCACTTTTTTTGGACTCATTGTTTAAGTCACCATATGCTGTAGTTTATAGTTCGTATGCTTTTCTATTTTTGGGGATTCTCTAAAGCTAAACCTGCTCTTTTCTCATTTGGTAATTGTGAACTGAGACATAGGTGATGCTTCTTTTTTCTTTGCTTCGCACTGCATTGAGTTCTTTAAAATCAGTTACAAATTACAATTACAATCCATCTAAAGTTGCAGAGGGGAGTTGATACCTTTTATCCATATGAAGCACTACGAGTGTAAAATTGAAAGGATGCAAATATATGCTTGGTTAGGTTGGGTTTTCAAAGGGAGGGATTTGGTGATTACTGAAAGGAATTTACCAGGAATAGGAACTAAATTGGTTGGGGGAACCAATGGAGGATTTGTAGAGAAATTGAATTAGTGTATTTTCAATTCTCCATGAATATCTATGCTTGGCTATAGATAGTTACTGTATTTATTAGTAAAAAGAATTCTAGTTACAATGATTGCTGGTGGGATGACTATCTTGTGAAAAGGAACATGCAGGGCTTTGTTATTGGTCCCTAACCTAATCCTTATCAGGGAGATGGTTGGTCCGTTTTCCATGAAAATATGCTTTTCTACACAACTAATTGATCTAGTTGACGTTAACTTTGAAATCTCACATTCATTTTTGGATTTTACTTATTTTGCAGATGATCCAAATGCTCCTGGTGTTGCTCACTTGTACCTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTCGCCAAATGAATGGAATCTCAAACCACTGATATACAATGGCATACTTCTTTTTTGGTTATCATTTTCTGAAATTTGCTTCCAATTCTCCCCCTTCACTTGGTAATTTACCGTGTGTTTTCGCAAGAAGTTACCAAGAACACTGGAAAGCAAATTTTGAGACGAGCACATGGAATAGAGTACAACCTCAAAGTTCTTGGATGCATGAGTGGATAGTATTAGATGATTTGTAGATTGTTCTATATGTATCAATGTTCTTTTGGAGTGTTCAAGCCTTCAAGGTGCACTGAAATATATAGCCCTTCGGAATTTAGGTATCAATCGAAGGAAAAACGATGACTATCTATCTATCTATATATATATAAATAGTCCTTTGGAGATTATTCTGATGATTCAGACAGTAGCTGTACACATGCACAAATCAACTTTGAATAGGGGTTGGTTTGATAATAAATTTGTTTTT

mRNA sequence

CGACACATTCCGACGGCCTTTACACGTTCCAATCGCAAGTTCGTGTACAGCGAGTAAATTTATTATCAACTGATGGTCAGTGTTGGATTCAAAAATCTGAAATCTAATGGTGGGAAATCGAGACCAACGGCCGCAATTGCCTCCGTTAGGTGGGGGAAGATCGTCTTCCTCAATCTCCTTAGCTGCTCCAACTTCATGGGCGTCCACGACCTCGGTCTCTGCTTCGGGCAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTAGACCCGCCTTCCGATTGCTCCGCTGGCCCTAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTTCAGGTACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTTAATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTTGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACAATCGCAAAGGTGTTAATTGCAGTGAAATCAATTTTCGTAAATCCCAACCCTTATGATCCAAATGCTCCTGGTGTTGCTCACTTGTACCTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTCGCCAAATGAATGGAATCTCAAACCACTGATATACAATGGCATACTTCTTTTTTGGTTATCATTTTCTGAAATTTGCTTCCAATTCTCCCCCTTCACTTGGTAATTTACCGTGTGTTTTCGCAAGAAGTTACCAAGAACACTGGAAAGCAAATTTTGAGACGAGCACATGGAATAGAGTACAACCTCAAAGTTCTTGGATGCATGAGTGGATAGTATTAGATGATTTGTAGATTGTTCTATATGTATCAATGTTCTTTTGGAGTGTTCAAGCCTTCAAGGTGCACTGAAATATATAGCCCTTCGGAATTTAGGTATCAATCGAAGGAAAAACGATGACTATCTATCTATCTATATATATATAAATAGTCCTTTGGAGATTATTCTGATGATTCAGACAGTAGCTGTACACATGCACAAATCAACTTTGAATAGGGGTTGGTTTGATAATAAATTTGTTTTT

Coding sequence (CDS)

ATGGTGGGAAATCGAGACCAACGGCCGCAATTGCCTCCGTTAGGTGGGGGAAGATCGTCTTCCTCAATCTCCTTAGCTGCTCCAACTTCATGGGCGTCCACGACCTCGGTCTCTGCTTCGGGCAAGAGAATTCAAAGAGAAATGACTGAGTTTAACTTAGACCCGCCTTCCGATTGCTCCGCTGGCCCTAAGGGCGACAATCTTTACCACTGGTTCGCTACCATCTTTGGCCCTTCAGGTACACCATATGAAGGTGGCATATTTTTCCTGGACATAATTTTTCCAAGTGATTATCCATTTAATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTTGATTCCACTGGTAATGTAAGTTTGGACATTTTGAAGGATAACTGGAGTCCTGCGTTAACAATCGCAAAGGTGTTAATTGCAGTGAAATCAATTTTCGTAAATCCCAACCCTTATGATCCAAATGCTCCTGGTGTTGCTCACTTGTACCTGGCAGACAGAGCTAAACACGACGAGATAGCTGCTGAGTGGACGCTACGTTTCGCCAAATGA

Protein sequence

MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK
Homology
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BLAST of IVF0021296 vs. ExPASy Swiss-Prot
Match: Q9LJD7 (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana OX=3702 GN=COP10 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.7e-70
Identity = 120/157 (76.43%), Postives = 136/157 (86.62%), Query Frame = 0 

Query: 29  TSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIF 88
           +SW + TSVSASGKRIQREM E N+DPP DCSAGPKGDNLYHW ATI GPSGTPYEGGIF
Sbjct: 26  SSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIF 85

Query: 89  FLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIF 148
           FLDIIFPSDYPF PPK+VFKTRIYHCNVD+ G++S++IL+D+WSPALTI KVL A++SIF
Sbjct: 86  FLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIF 145

Query: 149 VNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 186
           + P PY P  P +A LYL DR KHDE+A EWTLRFAK
Sbjct: 146 LKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182

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BLAST of IVF0021296 vs. ExPASy Swiss-Prot
Match: Q2T9X7 (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus OX=9913 GN=UBE2E3 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.2e-53
Identity = 93/152 (61.18%), Postives = 117/152 (76.97%), Query Frame = 0 

Query: 33  STTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDI 92
           +T  +S S KRIQ+E+ E  LDPP +CSAGPKGDN+Y W +TI GP G+ YEGG+FFLDI
Sbjct: 55  TTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDI 114

Query: 93  IFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFVNPN 152
            F SDYPF PPKV F+TRIYHCN++S G + LDILKDNWSPALTI+KVL+++ S+  + N
Sbjct: 115 TFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCN 174

Query: 153 PYDPNAPGVAHLYLADRAKHDEIAAEWTLRFA 185
           P DP    +A  YL +RA+HD IA +WT R+A
Sbjct: 175 PADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206

[Close]
BLAST of IVF0021296 vs. ExPASy Swiss-Prot
Match: Q969T4 (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens OX=9606 GN=UBE2E3 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.2e-53
Identity = 93/152 (61.18%), Postives = 117/152 (76.97%), Query Frame = 0 

Query: 33  STTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDI 92
           +T  +S S KRIQ+E+ E  LDPP +CSAGPKGDN+Y W +TI GP G+ YEGG+FFLDI
Sbjct: 55  TTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDI 114

Query: 93  IFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFVNPN 152
            F SDYPF PPKV F+TRIYHCN++S G + LDILKDNWSPALTI+KVL+++ S+  + N
Sbjct: 115 TFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCN 174

Query: 153 PYDPNAPGVAHLYLADRAKHDEIAAEWTLRFA 185
           P DP    +A  YL +RA+HD IA +WT R+A
Sbjct: 175 PADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206

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BLAST of IVF0021296 vs. ExPASy Swiss-Prot
Match: P52483 (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus OX=10090 GN=Ube2e3 PE=1 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 3.2e-53
Identity = 93/152 (61.18%), Postives = 117/152 (76.97%), Query Frame = 0 

Query: 33  STTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDI 92
           +T  +S S KRIQ+E+ E  LDPP +CSAGPKGDN+Y W +TI GP G+ YEGG+FFLDI
Sbjct: 55  TTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDI 114

Query: 93  IFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFVNPN 152
            F SDYPF PPKV F+TRIYHCN++S G + LDILKDNWSPALTI+KVL+++ S+  + N
Sbjct: 115 TFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCN 174

Query: 153 PYDPNAPGVAHLYLADRAKHDEIAAEWTLRFA 185
           P DP    +A  YL +RA+HD IA +WT R+A
Sbjct: 175 PADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206

[Close]
BLAST of IVF0021296 vs. ExPASy Swiss-Prot
Match: Q96LR5 (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens OX=9606 GN=UBE2E2 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-51
Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = 0 

Query: 33  STTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDI 92
           +   +S S KRIQ+E+ E  LDPP +CSAGPKGDN+Y W +TI GP G+ YEGG+FFLDI
Sbjct: 49  TAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDI 108

Query: 93  IFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFVNPN 152
            F  DYPF PPKV F+TRIYHCN++S G + LDILKDNWSPALTI+KVL+++ S+  + N
Sbjct: 109 TFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCN 168

Query: 153 PYDPNAPGVAHLYLADRAKHDEIAAEWTLRFA 185
           P DP    +A  Y+ +RA+HD +A +WT R+A
Sbjct: 169 PADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200

[Close]
BLAST of IVF0021296 vs. ExPASy TrEMBL
Match: A0A5D3DDP3 (Constitutive photomorphogenesis protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00610 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 186
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of IVF0021296 vs. ExPASy TrEMBL
Match: A0A1S3BMW7 (constitutive photomorphogenesis protein 10 OS=Cucumis melo OX=3656 GN=LOC103491591 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 186
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of IVF0021296 vs. ExPASy TrEMBL
Match: A0A0A0KWU2 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280420 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.5e-102
Identity = 182/185 (98.38%), Postives = 182/185 (98.38%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RP LPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPPLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDNWSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 186
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of IVF0021296 vs. ExPASy TrEMBL
Match: A0A6J1JFC7 (constitutive photomorphogenesis protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111483999 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.7e-97
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RPQ P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191

Query: 181 LRFAK 186
           LRFAK
Sbjct: 192 LRFAK 196

[Close]
BLAST of IVF0021296 vs. ExPASy TrEMBL
Match: A0A6J1FTD1 (constitutive photomorphogenesis protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111448300 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.7e-97
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RPQ P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191

Query: 181 LRFAK 186
           LRFAK
Sbjct: 192 LRFAK 196

[Close]
BLAST of IVF0021296 vs. NCBI nr
Match: XP_008449820.1 (PREDICTED: constitutive photomorphogenesis protein 10 [Cucumis melo] >KAA0040070.1 constitutive photomorphogenesis protein 10 [Cucumis melo var. makuwa] >TYK21694.1 constitutive photomorphogenesis protein 10 [Cucumis melo var. makuwa])

HSP 1 Score: 386 bits (991), Expect = 1.80e-135
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 185
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of IVF0021296 vs. NCBI nr
Match: XP_004142171.1 (constitutive photomorphogenesis protein 10 [Cucumis sativus] >KGN54065.1 hypothetical protein Csa_018040 [Cucumis sativus])

HSP 1 Score: 380 bits (976), Expect = 3.49e-133
Identity = 182/185 (98.38%), Postives = 182/185 (98.38%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RP LPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPPLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG
Sbjct: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKDNWSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 185
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of IVF0021296 vs. NCBI nr
Match: XP_038902201.1 (constitutive photomorphogenesis protein 10 isoform X2 [Benincasa hispida])

HSP 1 Score: 368 bits (944), Expect = 2.65e-128
Identity = 176/185 (95.14%), Postives = 176/185 (95.14%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RPQLP  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPQLPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS G
Sbjct: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSAG 120

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           N SLDILKDNWSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NASLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFAK 185
           LRFAK
Sbjct: 181 LRFAK 185

[Close]
BLAST of IVF0021296 vs. NCBI nr
Match: XP_022943567.1 (constitutive photomorphogenesis protein 10 [Cucurbita moschata] >XP_022986179.1 constitutive photomorphogenesis protein 10 [Cucurbita maxima] >XP_023512726.1 constitutive photomorphogenesis protein 10 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7010225.1 Constitutive photomorphogenesis protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365 bits (938), Expect = 3.22e-127
Identity = 175/185 (94.59%), Postives = 177/185 (95.68%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RPQ P  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 12  MVGNRDHRPQQPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 71

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS+G
Sbjct: 72  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSSG 131

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           NVSLDILKD+WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 132 NVSLDILKDSWSPALTIAKVLIAVKSIFTNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 191

Query: 181 LRFAK 185
           LRFAK
Sbjct: 192 LRFAK 196

[Close]
BLAST of IVF0021296 vs. NCBI nr
Match: XP_038902200.1 (constitutive photomorphogenesis protein 10 isoform X1 [Benincasa hispida])

HSP 1 Score: 366 bits (939), Expect = 4.28e-127
Identity = 175/184 (95.11%), Postives = 175/184 (95.11%), Query Frame = 0 

Query: 1   MVGNRDQRPQLPPLGGGRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60
           MVGNRD RPQLP  GGGRSSSS SLA PTSWASTTSVSASGKRIQREMTEFNLDPPSDCS
Sbjct: 1   MVGNRDHRPQLPLFGGGRSSSSTSLAPPTSWASTTSVSASGKRIQREMTEFNLDPPSDCS 60

Query: 61  AGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTG 120
           AGPKGDNLYHWFATIFGP GTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDS G
Sbjct: 61  AGPKGDNLYHWFATIFGPPGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSAG 120

Query: 121 NVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180
           N SLDILKDNWSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYLADRAKHDEIAAEWT
Sbjct: 121 NASLDILKDNWSPALTIAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWT 180

Query: 181 LRFA 184
           LRFA
Sbjct: 181 LRFA 184

[Close]
BLAST of IVF0021296 vs. TAIR 10
Match: AT3G13550.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-71
Identity = 120/157 (76.43%), Postives = 136/157 (86.62%), Query Frame = 0 

Query: 29  TSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIF 88
           +SW + TSVSASGKRIQREM E N+DPP DCSAGPKGDNLYHW ATI GPSGTPYEGGIF
Sbjct: 26  SSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIF 85

Query: 89  FLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIF 148
           FLDIIFPSDYPF PPK+VFKTRIYHCNVD+ G++S++IL+D+WSPALTI KVL A++SIF
Sbjct: 86  FLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIF 145

Query: 149 VNPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 186
           + P PY P  P +A LYL DR KHDE+A EWTLRFAK
Sbjct: 146 LKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182

[Close]
BLAST of IVF0021296 vs. TAIR 10
Match: AT3G13550.2 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 219.5 bits (558), Expect = 2.2e-57
Identity = 98/125 (78.40%), Postives = 112/125 (89.60%), Query Frame = 0 

Query: 29  TSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIF 88
           +SW + TSVSASGKRIQREM E N+DPP DCSAGPKGDNLYHW ATI GPSGTPYEGGIF
Sbjct: 26  SSWVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIF 85

Query: 89  FLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIF 148
           FLDIIFPSDYPF PPK+VFKTRIYHCNVD+ G++S++IL+D+WSPALTI KVL A++SIF
Sbjct: 86  FLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIF 145

Query: 149 VNPNP 154
           + P P
Sbjct: 146 LKPEP 150

[Close]
BLAST of IVF0021296 vs. TAIR 10
Match: AT2G16740.1 (ubiquitin-conjugating enzyme 29 )

HSP 1 Score: 187.6 bits (475), Expect = 9.1e-48
Identity = 76/143 (53.15%), Postives = 109/143 (76.22%), Query Frame = 0 

Query: 42  KRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYPFN 101
           +RI +E+ E   DPP  CSAGP G++++HW ATI GP+ +PY GG+F ++I FP DYPF 
Sbjct: 4   RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63

Query: 102 PPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAPGV 161
           PPKVVF+T+++H N++S GN+ LDILKD WSPALTI+KVL+++ S+  +PNP DP  P +
Sbjct: 64  PPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123

Query: 162 AHLYLADRAKHDEIAAEWTLRFA 185
           AH+Y  D+ K++ +A  WT ++A
Sbjct: 124 AHIYKTDKTKYEAMARSWTQKYA 146

[Close]
BLAST of IVF0021296 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 184.5 bits (467), Expect = 7.7e-47
Identity = 76/145 (52.41%), Postives = 108/145 (74.48%), Query Frame = 0 

Query: 40  SGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYP 99
           + KRI +E+ +   DPP+ CSAGP  ++++HW ATI GPS +PY GG+F + I FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61

Query: 100 FNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAP 159
           F PPKV F+T+++H NV+S G++ LDILK+ WSPALTI+KVL+++ S+  +PNP DP  P
Sbjct: 62  FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 160 GVAHLYLADRAKHDEIAAEWTLRFA 185
            +AH+Y  DRAK++  A  WT ++A
Sbjct: 122 EIAHMYKTDRAKYESTARSWTQKYA 146

[Close]
BLAST of IVF0021296 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 184.5 bits (467), Expect = 7.7e-47
Identity = 76/145 (52.41%), Postives = 108/145 (74.48%), Query Frame = 0 

Query: 40  SGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIFGPSGTPYEGGIFFLDIIFPSDYP 99
           + KRI +E+ +   DPP+ CSAGP  ++++HW ATI GPS +PY GG+F + I FP DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61

Query: 100 FNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALTIAKVLIAVKSIFVNPNPYDPNAP 159
           F PPKV F+T+++H NV+S G++ LDILK+ WSPALTI+KVL+++ S+  +PNP DP  P
Sbjct: 62  FKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 160 GVAHLYLADRAKHDEIAAEWTLRFA 185
            +AH+Y  DRAK++  A  WT ++A
Sbjct: 122 EIAHMYKTDRAKYESTARSWTQKYA 146

The following BLAST results are available for this feature:
BLAST of IVF0021296 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LJD71.7e-7076.43Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana OX=3702 GN=CO... [more]
Q2T9X73.2e-5361.18Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus OX=9913 GN=UBE2E3 PE=2 SV=1[more]
Q969T43.2e-5361.18Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens OX=9606 GN=UBE2E3 PE=1 SV=1[more]
P524833.2e-5361.18Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus OX=10090 GN=Ube2e3 PE=1 SV=2[more]
Q96LR51.7e-5158.55Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens OX=9606 GN=UBE2E2 PE=1 SV=1[more]
BLAST of IVF0021296 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DDP31.2e-103100.00Constitutive photomorphogenesis protein 10 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3BMW71.2e-103100.00constitutive photomorphogenesis protein 10 OS=Cucumis melo OX=3656 GN=LOC1034915... [more]
A0A0A0KWU26.5e-10298.38UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280420 PE... [more]
A0A6J1JFC71.7e-9794.59constitutive photomorphogenesis protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1FTD11.7e-9794.59constitutive photomorphogenesis protein 10 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of IVF0021296 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008449820.11.80e-135100.00PREDICTED: constitutive photomorphogenesis protein 10 [Cucumis melo] >KAA0040070... [more]
XP_004142171.13.49e-13398.38constitutive photomorphogenesis protein 10 [Cucumis sativus] >KGN54065.1 hypothe... [more]
XP_038902201.12.65e-12895.14constitutive photomorphogenesis protein 10 isoform X2 [Benincasa hispida][more]
XP_022943567.13.22e-12794.59constitutive photomorphogenesis protein 10 [Cucurbita moschata] >XP_022986179.1 ... [more]
XP_038902200.14.28e-12795.11constitutive photomorphogenesis protein 10 isoform X1 [Benincasa hispida][more]
BLAST of IVF0021296 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13550.11.2e-7176.43Ubiquitin-conjugating enzyme family protein [more]
AT3G13550.22.2e-5778.40Ubiquitin-conjugating enzyme family protein [more]
AT2G16740.19.1e-4853.15ubiquitin-conjugating enzyme 29 [more]
AT1G64230.17.7e-4752.41ubiquitin-conjugating enzyme 28 [more]
AT1G64230.27.7e-4752.41ubiquitin-conjugating enzyme 28 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 42..185
e-value: 2.9E-59
score: 212.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 26..184
NoneNo IPR availablePANTHERPTHR24068:SF62UBIQUITIN-CONJUGATING ENZYME E2 E2coord: 26..184
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 43..178
e-value: 3.1E-42
score: 143.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 39..185
score: 50.38295
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 42..180
e-value: 7.57332E-61
score: 183.943
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 30..185
e-value: 1.3E-58
score: 199.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 28..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021296.1IVF0021296.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0010099 regulation of photomorphogenesis
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0061631 ubiquitin conjugating enzyme activity