IVF0021260 (gene) Melon (IVF77) v1

Overview


Name	IVF0021260
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LysM domain-containing protein
Location	chr09: 328388 .. 331609 (+)
RNA-Seq Expression	IVF0021260
Synteny	IVF0021260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGAAGGTGAGGCAGAGAAATAGAGCACACCGTTTTTCTCTTCTTCCACACCCAACTCTTCCTTCTCTAACTCTTAGTCTCAGGTACTTCGCTATTCCCTTAAAATCTCTCTTTAACATACCCATTACTCATAAACTTTGCTTTTTCTGCTTTTTTTCCCCTCCAATTTCTATCCCAGAAATTGGGCCAACACCAAAAAGTCATTCAACAACCAACTCAGAGGCATTTCTCTGGTATGTTTGCTCTCCATTCAACTTGGGCTCTGTATTCCTTTGTTTTATCACATACCCAGATATTGAATAGTCACTTATGGTTTGAATTTCTTTTGAATATTCACTTTTTTTAGGATGTTTTGGGATTATAAAGAATGAGTTTGTGATTAATGGTTAATCTGTGCTCATTTTGGCAGAGATGGAGGTTTCAACTTCTGGATGTATCCAAACATCAACTCTCCACCAAACACCACTTTGTTCATATTTTAGAAGGGTAACAGGAAAAATAAATATTAGTTACTCTGCTTTAAGAATTTGATAGTATCTGAACTGAAATGTGTTTTTTCCATCCTCAATTACTTTCCTTTTTCTACGGTGACTCTCATTTGTCAAGAACATGAGGTTACGTTTGTGCTTGATTTTCAGTTTAACCACTCAAAATCAGTCAACTATTTGATTTTACACTTGTATACGCAATTTTCATGCACAGATTTGTTTCTAGTTTCACAGTGGAGTTACCAATTGAAGTGATTCTACACTTCTTGTGGGATTCTACTAAGCTAGAAAAAGTGAAGTTTTATCGATAAATATACAAACTTTAATAGTGAATACCGTTGGAGTTAGTAAAGTTGAGTTATTTAACATCGACTAACTCGTGAAATTGGTGGGTCAAATAATGAGTTGGTTATTTTAATCGACTCAAGTCAGAGTGGTAGGCCAAACACCCACTTTAGTTGTCAATGTAATCATACGTTGTTTGCTGTTCAAAGACTCAAATCAGTCATATGGGGAATCACATTAAAATGAGTTAGTACTTAAGGAAATTCGTTGAATTTCATTTCAAATTTATTACAGTTTCATCTAAGTGTTAAGATGTCAATTGGTAGGAACGAGAGCTTAGCTTCAATTTCAAACAAGAATGGAGATCCCCCAAATTCCATTGTCATAGATAATAAGAAGATAGTGGACACGGATCTAGAACAGAAGGGGCAGAATATCAAGATTCAAAACTCTCGAGCAGTAAGCAAGGTTGCACTTTTTTCTCACTTCTAAGCAATATTCTAAACTCCTCTGCAGGTTTTCTTTTGTGACTTTACTTTTTGAGGTTTCTACTTCTAGCTTCTTGTTGAATCACTTCAGAAAGAAATTGATAGCTCAAAGCTTTTTTGTAGGAGTCATTTTCCCAACTTTGATATCATGGTTGGTTATATAGTCTAAATGATGATTACATATGGAATTTAGTTTATCTTTTTTGCAATGTATTCACTAATAATGGGTGCTAGAAACTATAAGATAGTTGCAAACTAATTATTGAATGTTAAAATCTTCCCACATGAGACAAATCCCACATGTCTTTAACAACCAAATTTCTTGGGTTCATAATTTCCAAAACTCTGTAATACTTGAAGAATTGATAAAAGCACTTGAACCATTCTGAACTGCAATTTATGACCGTATCCTGAGTAGTAAAGGGCATTGTTATCAGTTCAAGATCGAATTATTCTTGTTCTTGGCTCCTTTCTTATGTTCTACATAATCACTACAGATTAGAGATGCGTTTCAATTAGAAGAAAAGCTCCAAAGTGCTTTGAACGGACTTCAAATCTATAAGAAGCTTTTTGCGCTAGCCTCCTCTCGTCTACCTCCTGTAAATTTCTTTTTCTCACCAGAAGTAATATATTCTTTCATTAAGAGTTATGTCTAAACCAAACATATCATATCTACATACTTATTTGGATACTTCTTTGACGTTTATCTAGAGAAATGATAATTCAACAAACTTATTTGTTCTCTTTTTTCATTTTTTCCCTGTCAGGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTGTAATATTTTGTACCAGATGCATAATTGGTGCTTCTTATGCTAGAGTTTTTGGAACATTGAAGCTTAAAGCCATTAATAAACAAGAGGGAGAACGTCACAAGTTTAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGAGAATTGGATGGTTTGGATTGTGAGGCCCCCATAGATTCTACTGTAAGTAACGTAACTTCATGCTCCTACTTTTACCCCAGTTCACCCACCCTTGTATGAAGTTTTTCTTTAGAGTGTTTTCTTGAGCATGATGTAATTAGATTTCTTATAATAAATGAGGCAGAGGTAATGTAATACTTGCTAATGGGAGCAAAATTGACTACTACTGAAGTTGTTGAATTGTTGCTTTCATTTGTTTGAGCACCCATCACACCGTGCCTTTAAAAGCTTATCATTCAATTTTGTCTACTCCTAACGGAGTTCTCTGGCCATTCACTTCCCTTTCTTCTGGTTAGCCTCATCTTTTTGTTTCAACCAGATGATAATACTGCCAAAATGGTAAACTTTCTTCAGATAACAACATTGGATTCCACATGGGAGTGGTGACCACTGACCACTGACCACTAAACTAAGAAGGGAACAGGGCAGAAACATGTTACTGAGAGTGGGTTTAAAATGGCCAGAAAAACGTGGCACAACCTTGTTTGAATCAAATCTCTTCTATAGGTTGTGCAATTGAACTTCTTCTCTAGGTTATACAATTATGTTCTTGAGTTAAAACAAGAGAGGAGCCAAAATTTGGTGGATGGAACCATTGCCTTGTGGCTAGAGCGTGATTAATGGTTTAATGGACCTTGGTTCTGCGGCTCTAGAGGATCGTTAACTAGGCTATCTAATCTTGCTCTGTTGTTACAGATTGGAAAGAGAGATGCATCTATTAGCTTGATTCAAGCTTTTGAGAGTTATCATTTGTCTTCTAGTCTCCTTCCAAGTCAAAAGTTCACAATTTGATAACAGTTCATGGTTTTTGTTTTGCAGAGTCCTTCAGCAGATGAGCAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTAGACCAGGATTATGAAAAATTTCTATCAGAATGTGGACTAAGTAAATGGGGCTACTGGCGTGGGGGTACCCAAAGACCTGAGCAGGAATAG

mRNA sequence

ATGGAAGTGAAGGTGAGGCAGAGAAATAGAGCACACCGTTTTTCTCTTCTTCCACACCCAACTCTTCCTTCTCTAACTCTTAGTCTCAGAAATTGGGCCAACACCAAAAAGTCATTCAACAACCAACTCAGAGGCATTTCTCTGAGATGGAGGTTTCAACTTCTGGATGTATCCAAACATCAACTCTCCACCAAACACCACTTTGTTCATATTTTAGAAGGGAACGAGAGCTTAGCTTCAATTTCAAACAAGAATGGAGATCCCCCAAATTCCATTGTCATAGATAATAAGAAGATAGTGGACACGGATCTAGAACAGAAGGGGCAGAATATCAAGATTCAAAACTCTCGAGCAGTAAGCAAGATTAGAGATGCGTTTCAATTAGAAGAAAAGCTCCAAAGTGCTTTGAACGGACTTCAAATCTATAAGAAGCTTTTTGCGCTAGCCTCCTCTCGTCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTGTAATATTTTGTACCAGATGCATAATTGGTGCTTCTTATGCTAGAGTTTTTGGAACATTGAAGCTTAAAGCCATTAATAAACAAGAGGGAGAACGTCACAAGTTTAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGAGAATTGGATGGTTTGGATTGTGAGGCCCCCATAGATTCTACTAGTCCTTCAGCAGATGAGCAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTAGACCAGGATTATGAAAAATTTCTATCAGAATGTGGACTAAGTAAATGGGGCTACTGGCGTGGGGGTACCCAAAGACCTGAGCAGGAATAG

Coding sequence (CDS)

ATGGAAGTGAAGGTGAGGCAGAGAAATAGAGCACACCGTTTTTCTCTTCTTCCACACCCAACTCTTCCTTCTCTAACTCTTAGTCTCAGAAATTGGGCCAACACCAAAAAGTCATTCAACAACCAACTCAGAGGCATTTCTCTGAGATGGAGGTTTCAACTTCTGGATGTATCCAAACATCAACTCTCCACCAAACACCACTTTGTTCATATTTTAGAAGGGAACGAGAGCTTAGCTTCAATTTCAAACAAGAATGGAGATCCCCCAAATTCCATTGTCATAGATAATAAGAAGATAGTGGACACGGATCTAGAACAGAAGGGGCAGAATATCAAGATTCAAAACTCTCGAGCAGTAAGCAAGATTAGAGATGCGTTTCAATTAGAAGAAAAGCTCCAAAGTGCTTTGAACGGACTTCAAATCTATAAGAAGCTTTTTGCGCTAGCCTCCTCTCGTCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTGTAATATTTTGTACCAGATGCATAATTGGTGCTTCTTATGCTAGAGTTTTTGGAACATTGAAGCTTAAAGCCATTAATAAACAAGAGGGAGAACGTCACAAGTTTAGAAGCGGGCACTGGAGATCTGCTCTTCGTGATATAAGAGAATTGGATGGTTTGGATTGTGAGGCCCCCATAGATTCTACTAGTCCTTCAGCAGATGAGCAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTAGACCAGGATTATGAAAAATTTCTATCAGAATGTGGACTAAGTAAATGGGGCTACTGGCGTGGGGGTACCCAAAGACCTGAGCAGGAATAG

Protein sequence

MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE

Homology

[Close]

BLAST of IVF0021260 vs. ExPASy TrEMBL
Match: A0A5A7T6Z4 (LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00440 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 8.5e-154
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120

Query: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180
           KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY
Sbjct: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180

Query: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE 240
           ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE
Sbjct: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE 240

Query: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of IVF0021260 vs. ExPASy TrEMBL
Match: A0A1S3CBV5 (uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.1e-151
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTD EQKGQNIKIQN R VS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120

Query: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180
           KIRDAFQLEEKLQ+ALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY
Sbjct: 121 KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180

Query: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE 240
           ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS DEQISVE
Sbjct: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVE 240

Query: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of IVF0021260 vs. ExPASy TrEMBL
Match: A0A1S3CB50 (uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.2e-149
Identity = 273/286 (95.45%), Postives = 274/286 (95.80%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTD EQKGQNIKIQN R VS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120

Query: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPP--------ARTTSFIVLVPLVIFCT 180
           KIRDAFQLEEKLQ+ALNGLQIYKKLFALASSRLPP        ARTTSFIVLVPLVIFCT
Sbjct: 121 KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPVNFFFSPEARTTSFIVLVPLVIFCT 180

Query: 181 RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS 240
           RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS
Sbjct: 181 RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS 240

Query: 241 ADEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
            DEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 EDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 286

[Close]

BLAST of IVF0021260 vs. ExPASy TrEMBL
Match: A0A0A0KSX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650530 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135
Identity = 250/279 (89.61%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLL-DVSK 60
           MEVKV QRNRAHRFSLLPH T PSL LSL NWANTKKSFNNQLRGI+LRWRFQLL D+SK
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLSNWANTKKSFNNQLRGIALRWRFQLLADISK 60

Query: 61  HQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAV 120
           HQLSTKHHFVHILEGNESL S SN+NGDPP+SIV+ NKKI+DTDLEQK QNIKIQN R V
Sbjct: 61  HQLSTKHHFVHILEGNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNPREV 120

Query: 121 SKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGAS 180
            KIR+AFQLEEKLQSALNGL+IYKKLFALASS  PPARTTSFIVLVPLVIFC RCIIGAS
Sbjct: 121 RKIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCIIGAS 180

Query: 181 YARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISV 240
           YAR FGTLKLKAI+KQEGER KFRSGHWRSALRDIRELDGLDCEAPIDSTSPS DEQISV
Sbjct: 181 YARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISV 240

Query: 241 EDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           E+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 EELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279

[Close]

BLAST of IVF0021260 vs. ExPASy TrEMBL
Match: A0A1S3CA61 (uncharacterized protein LOC103498697 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 3.0e-127
Identity = 240/278 (86.33%), Postives = 240/278 (86.33%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTD EQKGQNIKIQN R VS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120

Query: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180
           K                                  ARTTSFIVLVPLVIFCTRCIIGASY
Sbjct: 121 K----------------------------------ARTTSFIVLVPLVIFCTRCIIGASY 180

Query: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE 240
           ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS DEQISVE
Sbjct: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVE 240

Query: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279
           DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 244

[Close]

BLAST of IVF0021260 vs. NCBI nr
Match: KAA0039254.1 (uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00440.1 uncharacterized protein E5676_scaffold169G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 551 bits (1419), Expect = 1.28e-197
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120

Query: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180
           KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY
Sbjct: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180

Query: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE 240
           ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE
Sbjct: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE 240

Query: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of IVF0021260 vs. NCBI nr
Match: XP_008459633.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])

HSP 1 Score: 541 bits (1395), Expect = 5.84e-194
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTD EQKGQNIKIQN R VS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120

Query: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180
           KIRDAFQLEEKLQ+ALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY
Sbjct: 121 KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGASY 180

Query: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISVE 240
           ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS DEQISVE
Sbjct: 181 ARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVE 240

Query: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 DLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278

[Close]

BLAST of IVF0021260 vs. NCBI nr
Match: XP_008459632.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X1 [Cucumis melo])

HSP 1 Score: 534 bits (1376), Expect = 6.18e-191
Identity = 273/286 (95.45%), Postives = 274/286 (95.80%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60
           MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH
Sbjct: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLLDVSKH 60

Query: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAVS 120
           QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTD EQKGQNIKIQN R VS
Sbjct: 61  QLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRVVS 120

Query: 121 KIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPP--------ARTTSFIVLVPLVIFCT 180
           KIRDAFQLEEKLQ+ALNGLQIYKKLFALASSRLPP        ARTTSFIVLVPLVIFCT
Sbjct: 121 KIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPVNFFFSPEARTTSFIVLVPLVIFCT 180

Query: 181 RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS 240
           RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS
Sbjct: 181 RCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPS 240

Query: 241 ADEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
            DEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 EDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 286

[Close]

BLAST of IVF0021260 vs. NCBI nr
Match: XP_011656102.1 (uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus] >KGN52688.1 hypothetical protein Csa_009213 [Cucumis sativus])

HSP 1 Score: 490 bits (1262), Expect = 1.13e-173
Identity = 250/279 (89.61%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLL-DVSK 60
           MEVKV QRNRAHRFSLLPH T PSL LSL NWANTKKSFNNQLRGI+LRWRFQLL D+SK
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLSNWANTKKSFNNQLRGIALRWRFQLLADISK 60

Query: 61  HQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRAV 120
           HQLSTKHHFVHILEGNESL S SN+NGDPP+SIV+ NKKI+DTDLEQK QNIKIQN R V
Sbjct: 61  HQLSTKHHFVHILEGNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNPREV 120

Query: 121 SKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGAS 180
            KIR+AFQLEEKLQSALNGL+IYKKLFALASS  PPARTTSFIVLVPLVIFC RCIIGAS
Sbjct: 121 RKIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCIIGAS 180

Query: 181 YARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQISV 240
           YAR FGTLKLKAI+KQEGER KFRSGHWRSALRDIRELDGLDCEAPIDSTSPS DEQISV
Sbjct: 181 YARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISV 240

Query: 241 EDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           E+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 EELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 279

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BLAST of IVF0021260 vs. NCBI nr
Match: XP_011656101.1 (uncharacterized protein LOC101208955 isoform X1 [Cucumis sativus])

HSP 1 Score: 485 bits (1248), Expect = 1.71e-171
Identity = 250/282 (88.65%), Postives = 260/282 (92.20%), Query Frame = 0


Query: 1   MEVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLRWRFQLL-DVSK 60
           MEVKV QRNRAHRFSLLPH T PSL LSL NWANTKKSFNNQLRGI+LRWRFQLL D+SK
Sbjct: 1   MEVKVWQRNRAHRFSLLPHSTPPSLILSLSNWANTKKSFNNQLRGIALRWRFQLLADISK 60

Query: 61  HQLSTKHHFVHILEG---NESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNS 120
           HQLSTKHHFVHILEG   NESL S SN+NGDPP+SIV+ NKKI+DTDLEQK QNIKIQN 
Sbjct: 61  HQLSTKHHFVHILEGYGRNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNP 120

Query: 121 RAVSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCII 180
           R V KIR+AFQLEEKLQSALNGL+IYKKLFALASS  PPARTTSFIVLVPLVIFC RCII
Sbjct: 121 REVRKIRNAFQLEEKLQSALNGLRIYKKLFALASSHQPPARTTSFIVLVPLVIFCARCII 180

Query: 181 GASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQ 240
           GASYAR FGTLKLKAI+KQEGER KFRSGHWRSALRDIRELDGLDCEAPIDSTSPS DEQ
Sbjct: 181 GASYARAFGTLKLKAIDKQEGERRKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQ 240

Query: 241 ISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 278
           ISVE+LSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE
Sbjct: 241 ISVEELSHAYKKLDQDYEKFLSECGLSKWGYWRGGTQRPEQE 282

[Close]

BLAST of IVF0021260 vs. TAIR 10
Match: AT4G09970.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 9.6e-09
Identity = 56/235 (23.83%), Postives = 106/235 (45.11%), Query Frame = 0


Query: 40  NNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNG----DPPNSIVID 99
           + + +  S R RF +  +S+++  TKH      + +ESL  I  + G    +P  S    
Sbjct: 26  SKRFKRASERCRFCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEESKT-- 85

Query: 100 NKKIVDTDLEQKGQNIKIQNSRAVSKIRDAFQLEE--KLQSALNGLQIYKKLFALASSRL 159
           + ++ D D E+K   +        SK+    +L +  +++     +     L       L
Sbjct: 86  SSRLDDLDCEEKHDAVTSSVIDDDSKMNTTEELPDLRRVEKYTETVGTADNLSGQNHQIL 145

Query: 160 PPARTTSFIV-LVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALR 219
           P   T   +  L+P++ FC  CIIG  +           I+++  + H   S  WR+AL 
Sbjct: 146 PHLNTGVLLTSLLPVLGFCIICIIGTLHT---------IISRKTSQGHHHGSERWRTALM 205

Query: 220 DIRE---LDGLDCEAPIDSTSPSADEQISVEDLSHAYKKLDQDYEKFLSECGLSK 265
           D  E    DG D  +P    + +  E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 206 DWNEPLASDGHDSMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGVGE 249

[Close]

BLAST of IVF0021260 vs. TAIR 10
Match: AT4G09970.2 (unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-08
Identity = 56/226 (24.78%), Postives = 102/226 (45.13%), Query Frame = 0


Query: 46  ISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNG----DPPNSIVIDNKKIVD 105
           +S +W F +  +S+++  TKH      + +ESL  I  + G    +P  S    + ++ D
Sbjct: 1   MSSKW-FCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEESKT--SSRLDD 60

Query: 106 TDLEQKGQNIKIQNSRAVSKIRDAFQLEE--KLQSALNGLQIYKKLFALASSRLPPARTT 165
            D E+K   +        SK+    +L +  +++     +     L       LP   T 
Sbjct: 61  LDCEEKHDAVTSSVIDDDSKMNTTEELPDLRRVEKYTETVGTADNLSGQNHQILPHLNTG 120

Query: 166 SFIV-LVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELD 225
             +  L+P++ FC  CIIG  +           I+++  + H   S  WR+AL D  E  
Sbjct: 121 VLLTSLLPVLGFCIICIIGTLHT---------IISRKTSQGHHHGSERWRTALMDWNEPL 180

Query: 226 GLDCEAPIDSTSPSADEQISVEDLSHAYKKLDQDYEKFLSECGLSK 265
             D     DS SP   E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 181 ASDGH---DSMSPEYREATATDEMNEAYSRVELEYKRFLLECGVGE 211

The following BLAST results are available for this feature:

BLAST of IVF0021260 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0021260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6Z4	8.5e-154	100.00	LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CBV5	5.1e-151	98.20	uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CB50	8.2e-149	95.45	uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KSX5	1.4e-135	89.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650530 PE=4 SV=1	[more]
A0A1S3CA61	3.0e-127	86.33	uncharacterized protein LOC103498697 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of IVF0021260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039254.1	1.28e-197	100.00	uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00...	[more]
XP_008459633.1	5.84e-194	98.20	PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo]	[more]
XP_008459632.1	6.18e-191	95.45	PREDICTED: uncharacterized protein LOC103498697 isoform X1 [Cucumis melo]	[more]
XP_011656102.1	1.13e-173	89.61	uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus] >KGN52688.1 hy...	[more]
XP_011656101.1	1.71e-171	88.65	uncharacterized protein LOC101208955 isoform X1 [Cucumis sativus]	[more]

BLAST of IVF0021260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09970.1	9.6e-09	23.83	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXP...	[more]
AT4G09970.2	4.8e-08	24.78	unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 239..259
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 68..113 score: 8.522449

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021260.1	IVF0021260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane