IVF0021210 (gene) Melon (IVF77) v1

Overview
NameIVF0021210
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein NRT1/ PTR FAMILY 5.2-like
Locationchr12: 16408850 .. 16409041 (-)
RNA-Seq ExpressionIVF0021210
SyntenyIVF0021210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAAGTGGAGGAGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGCAACTGTGAGTTTCAAAGGATTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTCCTTCATTGTTGGTGATTATAAGTTTAGAGACTTGAAAACTGTAAAGAAAACCGTAGAAAATTGTAAGTAA

mRNA sequence

ATGGCACAAGTGGAGGAGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGCAACTGTGAGTTTCAAAGGATTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTCCTTCATTGTTGGTGATTATAAGTTTAGAGACTTGAAAACTGTAAAGAAAACCGTAGAAAATTGTAAGTAA

Coding sequence (CDS)

ATGGCACAAGTGGAGGAGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGCAACTGTGAGTTTCAAAGGATTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTCCTTCATTGTTGGTGATTATAAGTTTAGAGACTTGAAAACTGTAAAGAAAACCGTAGAAAATTGTAAGTAA

Protein sequence

MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFRDLKTVKKTVENCK
Homology
[Close]
BLAST of IVF0021210 vs. ExPASy Swiss-Prot
Match: Q8VZR7 (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 1.7e-06
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 16 YTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          YT+D TV  +G PVL SKTGRWRACSF++G
Sbjct: 7  YTQDGTVDLQGRPVLASKTGRWRACSFLLG 36

[Close]
BLAST of IVF0021210 vs. ExPASy Swiss-Prot
Match: Q9FNL8 (Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.4e-05
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0 

Query: 4  VEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          VEE G     DDYT+D TV  +G  V RS+TGRW+ACSF+V
Sbjct: 3  VEEVG-----DDYTKDGTVDLRGNRVRRSQTGRWKACSFVV 38

[Close]
BLAST of IVF0021210 vs. ExPASy Swiss-Prot
Match: Q9FNL7 (Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-05
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0 

Query: 4  VEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          VEE G     DDYT+D TV  +G PV RS  GRW+ACSF+V
Sbjct: 3  VEEVG-----DDYTKDGTVDLQGNPVRRSIRGRWKACSFVV 38

[Close]
BLAST of IVF0021210 vs. ExPASy Swiss-Prot
Match: P46032 (Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 2.7e-04
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 0 

Query: 16 YTEDATVSFKGLPVLRSKTGRWRACSFIVGD 47
          Y ED +V F G P L+ KTG W+AC FI+G+
Sbjct: 24 YAEDGSVDFNGNPPLKEKTGNWKACPFILGN 54

[Close]
BLAST of IVF0021210 vs. ExPASy TrEMBL
Match: A0A5D3DCP8 (Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00110 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.1e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFRDLKTVKKTVE 60
          MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFRDLKTVKKTVE
Sbjct: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFRDLKTVKKTVE 60

Query: 61 NC 63
          NC
Sbjct: 61 NC 62

[Close]
BLAST of IVF0021210 vs. ExPASy TrEMBL
Match: A0A5A7T926 (Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001600 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.7e-14
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          MAQVEEKGS+NGRDDYTED TVS KGLPVLRSKTG WRACSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of IVF0021210 vs. ExPASy TrEMBL
Match: A0A0A0LC54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608170 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.7e-14
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          MAQV EKGS+NGRDDYTED TVS KGLPVLRSKTGRWRACSFIV
Sbjct: 1  MAQVGEKGSENGRDDYTEDGTVSLKGLPVLRSKTGRWRACSFIV 44

[Close]
BLAST of IVF0021210 vs. ExPASy TrEMBL
Match: A0A1S3BHC2 (LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo OX=3656 GN=LOC103489849 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.7e-14
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          MAQVEEKGS+NGRDDYTED TVS KGLPVLRSKTG WRACSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of IVF0021210 vs. ExPASy TrEMBL
Match: A0A6J1K4P2 (protein NRT1/ PTR FAMILY 5.2-like OS=Cucurbita maxima OX=3661 GN=LOC111491650 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-12
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          MAQVEEKGS +GRDDYT+D TVS KG P+LRSKTGRWRACSFIV
Sbjct: 19 MAQVEEKGSADGRDDYTQDGTVSLKGDPILRSKTGRWRACSFIV 62

[Close]
BLAST of IVF0021210 vs. NCBI nr
Match: KAA0043221.1 (protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa] >TYK21343.1 protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (332), Expect = 1.46e-38
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFRDLKTVKKTVE 60
          MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFRDLKTVKKTVE
Sbjct: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFRDLKTVKKTVE 60

Query: 61 NC 62
          NC
Sbjct: 61 NC 62

[Close]
BLAST of IVF0021210 vs. NCBI nr
Match: KAA0037975.1 (protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 6.97e-18
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 44
          MAQVEEKGS+NGRDDYTED TVS KGLPVLRSKTG WRACSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of IVF0021210 vs. NCBI nr
Match: XP_008447390.2 (PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 6.97e-18
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 44
          MAQVEEKGS+NGRDDYTED TVS KGLPVLRSKTG WRACSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of IVF0021210 vs. NCBI nr
Match: XP_004152059.1 (protein NRT1/ PTR FAMILY 5.2 [Cucumis sativus] >KGN58287.1 hypothetical protein Csa_017448 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 6.97e-18
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 44
          MAQV EKGS+NGRDDYTED TVS KGLPVLRSKTGRWRACSFIV
Sbjct: 1  MAQVGEKGSENGRDDYTEDGTVSLKGLPVLRSKTGRWRACSFIV 44

[Close]
BLAST of IVF0021210 vs. NCBI nr
Match: GAU44543.1 (hypothetical protein TSUD_335250 [Trifolium subterraneum])

HSP 1 Score: 79.3 bits (194), Expect = 3.64e-17
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVG 45
          MA VEEKGS NG++DYT+D TV  KG P+LRSKTGRW+ACSFIVG
Sbjct: 1  MAMVEEKGSANGQEDYTQDGTVDLKGRPILRSKTGRWKACSFIVG 45

[Close]
BLAST of IVF0021210 vs. TAIR 10
Match: AT2G40460.1 (Major facilitator superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.2e-07
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 16 YTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          YT+D TV  +G PVL SKTGRWRACSF++G
Sbjct: 7  YTQDGTVDLQGRPVLASKTGRWRACSFLLG 36

[Close]
BLAST of IVF0021210 vs. TAIR 10
Match: AT5G46040.1 (Major facilitator superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.0e-06
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 0 

Query: 4  VEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          VEE G     DDYT+D TV  +G  V RS+TGRW+ACSF+V
Sbjct: 3  VEEVG-----DDYTKDGTVDLRGNRVRRSQTGRWKACSFVV 38

[Close]
BLAST of IVF0021210 vs. TAIR 10
Match: AT5G46050.1 (peptide transporter 3 )

HSP 1 Score: 48.9 bits (115), Expect = 1.7e-06
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0 

Query: 4  VEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          VEE G     DDYT+D TV  +G PV RS  GRW+ACSF+V
Sbjct: 3  VEEVG-----DDYTKDGTVDLQGNPVRRSIRGRWKACSFVV 38

[Close]
BLAST of IVF0021210 vs. TAIR 10
Match: AT2G02040.1 (peptide transporter 2 )

HSP 1 Score: 45.4 bits (106), Expect = 1.9e-05
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 0 

Query: 16 YTEDATVSFKGLPVLRSKTGRWRACSFIVGD 47
          Y ED +V F G P L+ KTG W+AC FI+G+
Sbjct: 24 YAEDGSVDFNGNPPLKEKTGNWKACPFILGN 54

[Close]
BLAST of IVF0021210 vs. TAIR 10
Match: AT3G54140.1 (peptide transporter 1 )

HSP 1 Score: 42.0 bits (97), Expect = 2.1e-04
Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = 0 

Query: 13 RDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGD 47
          +D YT+D TV     P  + KTG W+AC FI+G+
Sbjct: 4  KDVYTQDGTVDIHKNPANKEKTGNWKACRFILGN 37

The following BLAST results are available for this feature:
BLAST of IVF0021210 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZR71.7e-0670.00Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2[more]
Q9FNL81.4e-0558.54Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1[more]
Q9FNL72.4e-0558.54Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1[more]
P460322.7e-0454.84Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1[more]
BLAST of IVF0021210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DCP88.1e-28100.00Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7T9268.7e-1490.91Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0LC548.7e-1490.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608170 PE=3 SV=1[more]
A0A1S3BHC28.7e-1490.91LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo OX=3656 G... [more]
A0A6J1K4P22.1e-1284.09protein NRT1/ PTR FAMILY 5.2-like OS=Cucurbita maxima OX=3661 GN=LOC111491650 PE... [more]
BLAST of IVF0021210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0043221.11.46e-38100.00protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa] >TYK21343.1 protein... [more]
KAA0037975.16.97e-1890.91protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa][more]
XP_008447390.26.97e-1890.91PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo][more]
XP_004152059.16.97e-1890.91protein NRT1/ PTR FAMILY 5.2 [Cucumis sativus] >KGN58287.1 hypothetical protein ... [more]
GAU44543.13.64e-1775.56hypothetical protein TSUD_335250 [Trifolium subterraneum][more]
BLAST of IVF0021210 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40460.11.2e-0770.00Major facilitator superfamily protein [more]
AT5G46040.11.0e-0658.54Major facilitator superfamily protein [more]
AT5G46050.11.7e-0658.54peptide transporter 3 [more]
AT2G02040.11.9e-0554.84peptide transporter 2 [more]
AT3G54140.12.1e-0447.06peptide transporter 1 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021210.1IVF0021210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035442 dipeptide transmembrane transport
biological_process GO:0042939 tripeptide transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0071916 dipeptide transmembrane transporter activity
molecular_function GO:0042937 tripeptide transmembrane transporter activity