IVF0021208 (gene) Melon (IVF77) v1

Overview


Name	IVF0021208
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like
Location	chr03: 21777656 .. 21780849 (-)
RNA-Seq Expression	IVF0021208
Synteny	IVF0021208

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATCCTTCCATCTTCATCAGCAGAAGCAGCACTTGCTCTAAATTCGACGGTGACTAAGATAAAGATGTCTTAAACTTTCCATTTCGAGTTGATTGCGAGCAGTTCTAGTTAGAGAATTCGTTTTTGTTTTGGATTTTGCTCAATCTCAGAAGTCGATATCTGAATTTGCAAATTCTTTCTCGAATCTTGCTCACTCTTATGGCGATCGCTTCCATTTCTATGCTCCGTCATCACACCGCCGCTTTAGCCGCCACTTCATCATTTCCAGTCTTCGGCAATGTTATTCGGCGAGTCTTCAAGTTCCGCTGCTTCTCAATTGTTGCCAAACAGCATAACCCTAACAATGTCTCCAATAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTAAACATACTTTCAAGGATTATTCATCTCTTGCACCGGTTCTCTCTCCTCAAGACAATCCTCCTCTCTCCGAATCTCAAGCCATCGGCACCGTTGCTGCTGCTCAAGCTAATTTCATGCGAGTAATTGTTCAGACGCTTCCTTCTCAATTTTCCGAAAGTTCGAACGACGATTTGGAGCGTTCTGGTAGCTTGGAAAATGATTCCTCCGAATCTTCTATGCTTGGAGTTGAGTTGCTGTGCGTCGTGAAGGCTGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGAGACAAGGTGGTCGTTGGTTCCATTGATTGGGTGGACCGCAGGGGAATGATCGAGAATGTCTTCCAAAGAAAATCGGAGATCCTTGATCCTCCGGTGGCTAACGTGGATCACTTGCTTGTGCTCTTCTCCATGGATCAGCCGAGGTTGGAGCCGTTTACACTTACGAGGTTTCTAGTTGAAGCAGAATCTACCGGCATTCCACTGACGTTGGGTCTCAATAAACTGGAACTTGTTGATGAAGAGGTTGCGTTTTCAACCTTCTACTTACTAAATTCTTCGATTATTATTTTCAACGCTTATACTATATCCGATTTCTTTTGCATTATTTGCCAATACTTCTCCATACGAGGAGTAATCACTGATGTAGCAAAATGTTATGCATTAATGATTCTTTGAACATCTGAAACTCAACAAAAGCAATGAAGTTTTAATCCCGTGAGAAAAAAGGCTACACTTCTAAATGACTAAATCACAGTGATAATGTTGTACTTCTAGAATGAGCTATGGTAATTAAGCAACTTTTGCCCCTTTGGGGACATCCGATAGAATTGGAACGAAATAGGGAAGATCAGCACGATTCCTGCACAATAAAAAATGTAGCAACTTTCACTTCTAGTTTGTTGCTTTGTTGTCACCCTCTTTCTTTTTCTCATAATATAATGCTTCCGCATTCAACTTATGATTGTAAAAAGGAACTTGGTTCTTACATTGCTTGTGATATTGCATGTTCTTTACTCTTGTAACCTTAAATTTTCTAGGATTGATCCAACTTTGTAATAATTATGGATGCTTTTCATTTCTTAATGCTGATAGTGGTTAGCAATGGGATATGCAGACAGTAGTTTCCTGGAAGTCCAGACTGCGTAGCTGGGGATATGATCCCCTTTTTTGTAGTGTTCAAACCGGGACTGGACTTGATACCCTTGCATATATTTTGAGAGATCAAACCACAGTTATTGTGGGGCCAAGTGGAGTTGGGAAATCAAGTCTCATCAATGCTCTCAGAAACAATAATCGTGCTGCTGATGCTTTGGACACAGATAATTGGTTTGATCCTGTGTGTTTGATCATTCTTCCACTATTAACTTTGTATTGGTGAACAAATTAGTTCGAAGACTTTCTTGATCACTTGACTTATAAGAGTATCGATGTTTTTCTTGGTCTATACAGATTCTTGGTAGCAAGTGGTTTGAGGACCAGCGTGTTGCAGAAGTTTCAACAAGAAGTGGCAGAGGGAAGCATACTACTCGTCATGTTTCTCTTCTACCGTTGACGGGAGGAGGATATTTGGCAGACACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAACAATCTCTTGCCCAAGCCTTTCCAGAGGTTTATACTACTTTACAATGTTGACATTGATTGTGATGATTTTTAACATCTGCCGTTAATAATCTGAAGTTCTGCTGCATTTCTTGGGTTTAACTGAATTCTCAACAGATTCAGAAAATGCTTCGTGCCAGTGAACCTGCCAAGTGCTCTTTTAATGATTGCTTACATCTTGGTGAACCGGGATGCATTATTAAAGGAGATTGGGAGCGATACCAGTACTATTTCCAACTTCTTGACGAAATCAGAATTAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGGGAGGGCGATGTAAGGTATGTACATTTTAGAGGTTGTGAAAAACAAAACACATATTTTGGATCTTTTATATGTAGTTGAGGGGGTGGCACATCAAATATAATGCAATGCTTCGGGGTATTATTTCGTTTGAATATCCTCTTCTAAATTTTAAACAAGTTGCAACCCTAAACATTGCAAGGGAAAGTCGGGAAATGTTGTTTATACGTACCCTCATCCATTTATAAACAAAAACAGGAACCCCTTCATCACTGATTTCTCTAAATATGTATCAACTTGATATCCCGATAACTTTCGAGGATCTTACCTTGTGCAACAAAGATTACTAATCACATTTGGCAAAATATTCTGGTTGCAGTTATGTTGTGTATGTATCCATTTATTGATGTAGTGTAGCACATCCAAGACTTGAACTGCCAAACGGACGAGTAACTCTAGAACCTGGTCACGTGACCACCGTGAATGACAACGTTGCTTAGCTAGCTCAAAACCTTAATTATTCCCTTATGAATATATAATGATGGAACTTCTCTTCGCAGGATCAAGGTTGGAGTTATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTAAAGAAGCATAGGAGACAATCCCGTAAGAGAGTGAATCAGTCGATACTTGATGAATTGGACGAAGACGAAGACGACTTGGAGGAAACCGATCCCATTTTGAGGGCAATGAAGAATGAAAACCAATAGAGAACAAATCCATCAGCTGCATATAAATCCTCCCAGTGTATATACTTCCCTTTATAACCCATCTTTGACTTGACATGTTAAAACAGTTTTTTTCATCGGAAATGAGCCAAGAAGATGATGTCTTTGCTACGGTGATTTGATACCAACCCA

mRNA sequence

GAAATCCTTCCATCTTCATCAGCAGAAGCAGCACTTGCTCTAAATTCGACGGTGACTAAGATAAAGATGTCTTAAACTTTCCATTTCGAGTTGATTGCGAGCAGTTCTAGTTAGAGAATTCGTTTTTGTTTTGGATTTTGCTCAATCTCAGAAGTCGATATCTGAATTTGCAAATTCTTTCTCGAATCTTGCTCACTCTTATGGCGATCGCTTCCATTTCTATGCTCCGTCATCACACCGCCGCTTTAGCCGCCACTTCATCATTTCCAGTCTTCGGCAATGTTATTCGGCGAGTCTTCAAGTTCCGCTGCTTCTCAATTGTTGCCAAACAGCATAACCCTAACAATGTCTCCAATAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTAAACATACTTTCAAGGATTATTCATCTCTTGCACCGGTTCTCTCTCCTCAAGACAATCCTCCTCTCTCCGAATCTCAAGCCATCGGCACCGTTGCTGCTGCTCAAGCTAATTTCATGCGAGTAATTGTTCAGACGCTTCCTTCTCAATTTTCCGAAAGTTCGAACGACGATTTGGAGCGTTCTGGTAGCTTGGAAAATGATTCCTCCGAATCTTCTATGCTTGGAGTTGAGTTGCTGTGCGTCGTGAAGGCTGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGAGACAAGGTGGTCGTTGGTTCCATTGATTGGGTGGACCGCAGGGGAATGATCGAGAATGTCTTCCAAAGAAAATCGGAGATCCTTGATCCTCCGGTGGCTAACGTGGATCACTTGCTTGTGCTCTTCTCCATGGATCAGCCGAGGTTGGAGCCGTTTACACTTACGAGGTTTCTAGTTGAAGCAGAATCTACCGGCATTCCACTGACGTTGGGTCTCAATAAACTGGAACTTGTTGATGAAGAGACAGTAGTTTCCTGGAAGTCCAGACTGCGTAGCTGGGGATATGATCCCCTTTTTTGTAGTGTTCAAACCGGGACTGGACTTGATACCCTTGCATATATTTTGAGAGATCAAACCACAGTTATTGTGGGGCCAAGTGGAGTTGGGAAATCAAGTCTCATCAATGCTCTCAGAAACAATAATCGTGCTGCTGATGCTTTGGACACAGATAATTGGTTTGATCCTATTCTTGGTAGCAAGTGGTTTGAGGACCAGCGTGTTGCAGAAGTTTCAACAAGAAGTGGCAGAGGGAAGCATACTACTCGTCATGTTTCTCTTCTACCGTTGACGGGAGGAGGATATTTGGCAGACACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAACAATCTCTTGCCCAAGCCTTTCCAGAGATTCAGAAAATGCTTCGTGCCAGTGAACCTGCCAAGTGCTCTTTTAATGATTGCTTACATCTTGGTGAACCGGGATGCATTATTAAAGGAGATTGGGAGCGATACCAGTACTATTTCCAACTTCTTGACGAAATCAGAATTAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGGGAGGGCGATGTAAGGATCAAGGTTGGAGTTATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTAAAGAAGCATAGGAGACAATCCCGTAAGAGAGTGAATCAGTCGATACTTGATGAATTGGACGAAGACGAAGACGACTTGGAGGAAACCGATCCCATTTTGAGGGCAATGAAGAATGAAAACCAATAGAGAACAAATCCATCAGCTGCATATAAATCCTCCCAGTGTATATACTTCCCTTTATAACCCATCTTTGACTTGACATGTTAAAACAGTTTTTTTCATCGGAAATGAGCCAAGAAGATGATGTCTTTGCTACGGTGATTTGATACCAACCCA

Coding sequence (CDS)

ATGGCGATCGCTTCCATTTCTATGCTCCGTCATCACACCGCCGCTTTAGCCGCCACTTCATCATTTCCAGTCTTCGGCAATGTTATTCGGCGAGTCTTCAAGTTCCGCTGCTTCTCAATTGTTGCCAAACAGCATAACCCTAACAATGTCTCCAATAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTAAACATACTTTCAAGGATTATTCATCTCTTGCACCGGTTCTCTCTCCTCAAGACAATCCTCCTCTCTCCGAATCTCAAGCCATCGGCACCGTTGCTGCTGCTCAAGCTAATTTCATGCGAGTAATTGTTCAGACGCTTCCTTCTCAATTTTCCGAAAGTTCGAACGACGATTTGGAGCGTTCTGGTAGCTTGGAAAATGATTCCTCCGAATCTTCTATGCTTGGAGTTGAGTTGCTGTGCGTCGTGAAGGCTGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGAGACAAGGTGGTCGTTGGTTCCATTGATTGGGTGGACCGCAGGGGAATGATCGAGAATGTCTTCCAAAGAAAATCGGAGATCCTTGATCCTCCGGTGGCTAACGTGGATCACTTGCTTGTGCTCTTCTCCATGGATCAGCCGAGGTTGGAGCCGTTTACACTTACGAGGTTTCTAGTTGAAGCAGAATCTACCGGCATTCCACTGACGTTGGGTCTCAATAAACTGGAACTTGTTGATGAAGAGACAGTAGTTTCCTGGAAGTCCAGACTGCGTAGCTGGGGATATGATCCCCTTTTTTGTAGTGTTCAAACCGGGACTGGACTTGATACCCTTGCATATATTTTGAGAGATCAAACCACAGTTATTGTGGGGCCAAGTGGAGTTGGGAAATCAAGTCTCATCAATGCTCTCAGAAACAATAATCGTGCTGCTGATGCTTTGGACACAGATAATTGGTTTGATCCTATTCTTGGTAGCAAGTGGTTTGAGGACCAGCGTGTTGCAGAAGTTTCAACAAGAAGTGGCAGAGGGAAGCATACTACTCGTCATGTTTCTCTTCTACCGTTGACGGGAGGAGGATATTTGGCAGACACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAACAATCTCTTGCCCAAGCCTTTCCAGAGATTCAGAAAATGCTTCGTGCCAGTGAACCTGCCAAGTGCTCTTTTAATGATTGCTTACATCTTGGTGAACCGGGATGCATTATTAAAGGAGATTGGGAGCGATACCAGTACTATTTCCAACTTCTTGACGAAATCAGAATTAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGGGAGGGCGATGTAAGGATCAAGGTTGGAGTTATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTAAAGAAGCATAGGAGACAATCCCGTAAGAGAGTGAATCAGTCGATACTTGATGAATTGGACGAAGACGAAGACGACTTGGAGGAAACCGATCCCATTTTGAGGGCAATGAAGAATGAAAACCAATAG

Protein sequence

MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNLLRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDDLERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNNRAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDELDEDEDDLEETDPILRAMKNENQ

Homology

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BLAST of IVF0021208 vs. ExPASy Swiss-Prot
Match: Q4V399 (Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=rsgA PE=2 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 7.0e-172
Identity = 314/448 (70.09%), Postives = 370/448 (82.59%), Query Frame = 0


Query: 60  LLRAKHTFKDY-SSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSN 119
           +LRAKH  K+Y SSL+PVLSP+  P L ESQAIGTVA AQANFMRVIVQ + +  S +S+
Sbjct: 1   MLRAKHIGKNYSSSLSPVLSPEHKPSLLESQAIGTVATAQANFMRVIVQDVAN--SVTSD 60

Query: 120 DDLERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIEN 179
           DD        NDSS++   GVELLCVV+AVLKKI+RRVLVGDKV+VGSIDWVDRRGMIEN
Sbjct: 61  DD--------NDSSKT---GVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIEN 120

Query: 180 VFQRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVD 239
           VF R+SEILDPPVANVDHLLVLFS+DQP+LEPFTLTRFLVEAEST IPLTL LNK EL+ 
Sbjct: 121 VFHRRSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTRIPLTLALNKTELIS 180

Query: 240 EETVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRN 299
           EE + +WK RLR W Y+PLFCSV T  GLD +A++LRDQT+VIVGPSGVGKSSLIN LR+
Sbjct: 181 EEELETWKIRLRGWNYEPLFCSVGTKDGLDDIAFVLRDQTSVIVGPSGVGKSSLINVLRS 240

Query: 300 NNRAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTP 359
           N+     ++ +NWF+P+LG+KWF+DQRV EVS+RSGRGKHTTR+VSLLP++ GGYLADTP
Sbjct: 241 NH-GGGVVEDENWFEPMLGNKWFDDQRVGEVSSRSGRGKHTTRNVSLLPVSEGGYLADTP 300

Query: 360 GFNQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYF 419
           GFNQPSL+K+TK SLA  FPEI+ M+   E  KC F DCLH+GEPGC++KGDWERY YY 
Sbjct: 301 GFNQPSLLKVTKHSLAHCFPEIRNMI---ESEKCGFRDCLHIGEPGCVVKGDWERYPYYL 360

Query: 420 QLLDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILD 479
           QLLDEIRIREEFQLRTFGTKRE DVR KVG MG + AEPRL  KKHRR+SRK+  Q+++ 
Sbjct: 361 QLLDEIRIREEFQLRTFGTKREDDVRYKVGDMGVKHAEPRLMPKKHRRESRKKTKQTMIS 420

Query: 480 ELDEDEDD----LEETDPILRAMKNENQ 503
           ELDE ED+      E DPI++A++NEN+
Sbjct: 421 ELDEFEDEDSDLYIENDPIVQAIENENK 431

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BLAST of IVF0021208 vs. ExPASy Swiss-Prot
Match: F4HTL8 (Small ribosomal subunit biogenesis GTPase RsgA 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g67460 PE=2 SV=2)

HSP 1 Score: 283.9 bits (725), Expect = 3.6e-75
Identity = 157/271 (57.93%), Postives = 191/271 (70.48%), Query Frame = 0


Query: 29  IRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNLLRAKHTFKDYSSLAPVLSPQDNPPLSES 88
           IRR F F       +Q NP NV+  P P+K +LR        S LAPVL   + P L E 
Sbjct: 30  IRRSFYFLS---AIRQENP-NVTKNPHPNKTILR--------SFLAPVLPLDEKPNLVEL 89

Query: 89  QAIGTVAAAQANFMRVIVQTLPSQFSESSNDDLERSGSLENDSSESSMLGVELLCVVKAV 148
           QAIGT+A A A++MRVIVQ +P                 E+D+ E   +GVELLCVV+ +
Sbjct: 90  QAIGTIATALADYMRVIVQDVP-----------------ESDNGEDDKIGVELLCVVRKL 149

Query: 149 LKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRKSEILDPPVANVDHLLVLFSMDQPRL 208
           LKKI R VLVGDKV+V  +DWVDRR  I NVF R SE+LDPPVANVDHL++LFS+DQP++
Sbjct: 150 LKKIGRTVLVGDKVLVDKVDWVDRRAKIINVFDRVSEVLDPPVANVDHLVILFSLDQPKI 209

Query: 209 EPFTLTRFLVEAESTGIPLTLGLNKLELVDEETVVSWKSRLRSWGYDPLFCSVQTGTGLD 268
           +PFTLTRFLVEAES GI +T+ LNK ELV +E V SWK RLRSW Y+PLFCSV T  G+D
Sbjct: 210 DPFTLTRFLVEAESIGIRITVALNKCELVTQEEVESWKIRLRSWNYEPLFCSVGTKVGID 269

Query: 269 TLAYILRDQTTVIVGPSGVGKSSLINALRNN 300
            +A+ LR+QT+VIVGPSGVGKSSLIN LR++
Sbjct: 270 EIAFNLRNQTSVIVGPSGVGKSSLINILRSS 271

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BLAST of IVF0021208 vs. ExPASy Swiss-Prot
Match: Q8YUA3 (Small ribosomal subunit biogenesis GTPase RsgA 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rsgA1 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.5e-70
Identity = 164/397 (41.31%), Postives = 226/397 (56.93%), Query Frame = 0


Query: 89  QAIGTVAAAQANFMRV-IVQTLPSQFSESSNDDLERSGSLENDSSESSMLGVELLCVVKA 148
           Q +GTV A QANF +V + Q +  Q S  + +++     L         L + LLC  + 
Sbjct: 8   QLLGTVVAVQANFYKVQLDQEVREQGSRGAGEEVHLDSPL-----PLCPLSL-LLCTRRT 67

Query: 149 VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRKSEILDPPVANVDHLLVLFSMDQPR 208
            LKKI ++V+VGD+VVV   DW   RG I +V  R++++  PP+AN D +L++F++  P 
Sbjct: 68  RLKKIGQQVMVGDRVVVEEPDWAGGRGAIADVLSRQTQLDRPPIANADQILLVFAVADPP 127

Query: 209 LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETVVSWKSRLRSWGYDPLFCSVQTGTGL 268
           LEP+ L+RFLV+AE+TG+ + L LNK +LV  E       RL +WGY PLF SV+    +
Sbjct: 128 LEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQISDRLLAWGYQPLFISVENQINI 187

Query: 269 DTLAYILRDQTTVIVGPSGVGKSSLINALRNNNRAADALDTDNWFDPILGSKWFEDQRVA 328
           D +A  L ++ TV+ GPSGVGKSSLINAL  N                       + RV 
Sbjct: 188 DQIAKYLSNKITVVAGPSGVGKSSLINALIPN----------------------INLRVG 247

Query: 329 EVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLRAS 388
           EVS +  RG+HTTRHV L  L  GG LADTPGFNQP  +  + + L   FPE ++ L   
Sbjct: 248 EVSGKLARGRHTTRHVELFELPNGGLLADTPGFNQPD-VDCSPEELVHYFPEARERLAI- 307

Query: 389 EPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 448
             A C FNDC H  EP C ++GDWERY++Y + L +  I  + QL       E  +++K 
Sbjct: 308 --ASCRFNDCSHRDEPDCAVRGDWERYEHYLEFLAD-AIARQTQLYQ-QADPESTLKLKT 367

Query: 449 GVMGAQQAEPRLELKKHRRQSRKRVNQSILDELDEDE 485
              G  Q EP+LE KK+RR SR+   Q + D   E+E
Sbjct: 368 KGKGQSQYEPKLESKKYRRTSRRTQVQGLQDLYQEEE 370

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BLAST of IVF0021208 vs. ExPASy Swiss-Prot
Match: Q3MG79 (Small ribosomal subunit biogenesis GTPase RsgA OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rsgA PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.8e-69
Identity = 162/397 (40.81%), Postives = 223/397 (56.17%), Query Frame = 0


Query: 89  QAIGTVAAAQANFMRV-IVQTLPSQFSESSNDDLERSGSLENDSSESSMLGVELLCVVKA 148
           Q +GTV A QANF +V + Q +    S  + +++     L             LLC  + 
Sbjct: 8   QLLGTVVAVQANFYKVQLDQDVREPGSRGAGEEVHLDSPLPLYPLSL------LLCTRRT 67

Query: 149 VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRKSEILDPPVANVDHLLVLFSMDQPR 208
            LKKI ++V+VGD+VVV   DW   RG I  V  R++++  PP+AN D +L++F++  P 
Sbjct: 68  RLKKIGQQVMVGDRVVVEEPDWAGGRGAIAEVLSRQTQLDRPPIANADQILLVFAVADPP 127

Query: 209 LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETVVSWKSRLRSWGYDPLFCSVQTGTGL 268
           LEP+ L+RFLV+AE+TG+ + L LNK +LV  E       RL +WGY PLF SV+    +
Sbjct: 128 LEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQISDRLLAWGYQPLFISVEKQINI 187

Query: 269 DTLAYILRDQTTVIVGPSGVGKSSLINALRNNNRAADALDTDNWFDPILGSKWFEDQRVA 328
           D +A  L ++ TV+ GPSGVGKSSLINAL  +                       + RV 
Sbjct: 188 DQIAKYLSNKITVVAGPSGVGKSSLINALIPD----------------------INLRVG 247

Query: 329 EVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLRAS 388
           EVS +  RG+HTTRHV L  L  GG LADTPGFNQP  +  + + L   FPE ++ L   
Sbjct: 248 EVSGKLARGRHTTRHVELFELPNGGLLADTPGFNQPD-VDCSPEELVHYFPEARERLAV- 307

Query: 389 EPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 448
             A C FNDCLH  EP C ++GDWERY++Y + L +  I  + QL       E  +++K 
Sbjct: 308 --ASCRFNDCLHRDEPDCAVRGDWERYEHYLEFLAD-AIARQTQLYQ-QADPESTLKLKT 367

Query: 449 GVMGAQQAEPRLELKKHRRQSRKRVNQSILDELDEDE 485
              G  Q EP+LE KK+RR SR+   Q + D   E+E
Sbjct: 368 KGKGQSQYEPKLESKKYRRTSRRTQVQGLQDLYQEEE 370

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BLAST of IVF0021208 vs. ExPASy Swiss-Prot
Match: B0JW21 (Small ribosomal subunit biogenesis GTPase RsgA OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rsgA PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-66
Identity = 145/383 (37.86%), Postives = 215/383 (56.14%), Query Frame = 0


Query: 92  GTVAAAQANFMRVIVQTLPSQFSESSNDDLERSGSLENDSSESSMLGVELLCVVKAVLKK 151
           GTV A QANF +V +                          +S+++G  LLC  +A L+K
Sbjct: 11  GTVVAVQANFYQVRL--------------------------DSAVMGENLLCTRRARLQK 70

Query: 152 IKRRVLVGDKVVVGSIDWVDRRGMIENVFQRKSEILDPPVANVDHLLVLFSMDQPRLEPF 211
           I + V+VGD+V V   ++ D++G I  V  R +EI  P VAN++ +L++F++ +P L+P+
Sbjct: 71  IGQSVMVGDRVRVEEANFGDQQGAIAEVLPRSTEIDRPAVANIEQILLVFALAEPVLDPW 130

Query: 212 TLTRFLVEAESTGIPLTLGLNKLELVDEETVVSWKSRLRSWGYDPLFCSVQTGTGLDTLA 271
            ++RFLV+AESTG+ + + +NK++L + E +  W  RL  WGY P F SV+   G + L 
Sbjct: 131 LISRFLVKAESTGLEIAVCVNKIDLGEPEQIEVWGDRLAGWGYRPFFVSVEKNRGFEALL 190

Query: 272 YILRDQTTVIVGPSGVGKSSLINALRNNNRAADALDTDNWFDPILGSKWFEDQRVAEVST 331
             L  + T++ GPSGVGKSSLIN L                          +QRV +VS 
Sbjct: 191 AQLNHKITLLAGPSGVGKSSLINCLIPE----------------------INQRVGDVSG 250

Query: 332 RSGRGKHTTRHVSLLPLTGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLRASEPAK 391
           +  +G+HTTRHV L  L   G LAD+PGFNQP +     + L   FPE++  L       
Sbjct: 251 KLQKGRHTTRHVQLFALPNRGLLADSPGFNQPDI-NCLPEELTFYFPEVRARLAL---GN 310

Query: 392 CSFNDCLHLGEPGCIIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKVGVMG 451
           C FNDC H  EP C+++GDWERYQ+Y + L+E   RE+   +T  + +E  +++K+   G
Sbjct: 311 CQFNDCTHRREPNCVVRGDWERYQHYLEFLEEAIAREQSLQKT--STKESSLKLKIKEAG 339

Query: 452 AQQAEPRLELKKHRRQSRKRVNQ 475
            +  EP+L  KK+RR SR+  NQ
Sbjct: 371 QETYEPKLANKKYRRPSRRGKNQ 339

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BLAST of IVF0021208 vs. ExPASy TrEMBL
Match: A0A5A7VEI9 (Putative ribosome biogenesis GTPase RsgA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00400 PE=3 SV=1)

HSP 1 Score: 985.3 bits (2546), Expect = 9.2e-284
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF
Sbjct: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DEDEDDLEETDPILRAMKNENQ 503
           DEDEDDLEETDPILRAMKNENQ
Sbjct: 481 DEDEDDLEETDPILRAMKNENQ 502

[Close]

BLAST of IVF0021208 vs. ExPASy TrEMBL
Match: A0A1S3BCE1 (putative ribosome biogenesis GTPase RsgA 1 OS=Cucumis melo OX=3656 GN=LOC103488495 PE=3 SV=1)

HSP 1 Score: 980.3 bits (2533), Expect = 3.0e-282
Identity = 500/502 (99.60%), Postives = 500/502 (99.60%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAALAATSSFPVFGNVIRRVF FRCFSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFNFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESS DD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSYDD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF
Sbjct: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DEDEDDLEETDPILRAMKNENQ 503
           DEDEDDLEETDPILRAMKNENQ
Sbjct: 481 DEDEDDLEETDPILRAMKNENQ 502

[Close]

BLAST of IVF0021208 vs. ExPASy TrEMBL
Match: A0A0A0KGV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365180 PE=3 SV=1)

HSP 1 Score: 941.4 bits (2432), Expect = 1.5e-270
Identity = 478/504 (94.84%), Postives = 492/504 (97.62%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAA+AATSS PVFGNV+RRVF FRCFSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAAIAATSSIPVFGNVLRRVFNFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFS+S NDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           LERSGSLE+DSS+SSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLEDDSSKSSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QR SEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGYDPLFCSVQTG GLD+LA+ILRDQTTVIVGPSGVGKSSLINALRN+N
Sbjct: 241 TLVSWKSRLRSWGYDPLFCSVQTGAGLDSLAFILRDQTTVIVGPSGVGKSSLINALRNSN 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           RA DA DTDNWFDPILGSKWFE+QRVAEVSTRSGRGKHTTRHVSLLPL+GGGYLADTPGF
Sbjct: 301 RATDASDTDNWFDPILGSKWFEEQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQKML ASEPAKCSFNDCLHLGEPGC+IKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLHASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG MG +QAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGEMGVKQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 D--EDEDDLEETDPILRAMKNENQ 503
           D  EDEDDLEET+PILRAMKNENQ
Sbjct: 481 DELEDEDDLEETNPILRAMKNENQ 504

[Close]

BLAST of IVF0021208 vs. ExPASy TrEMBL
Match: A0A6J1BS55 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005203 PE=3 SV=1)

HSP 1 Score: 890.6 bits (2300), Expect = 3.1e-255
Identity = 456/507 (89.94%), Postives = 478/507 (94.28%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTA  AAT+S P FGNV+RR F  RCFS+VAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTA--AATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAP LSPQDNPPLSESQAIGTVAAAQANFMRVIVQ+LPSQ S+SSN D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            E SGSLE DSSESS LGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QR SEILDPPVANVDHLLVLFSMDQP+LE FTLTRFL+EAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQT TGLD+LAYILRDQTTVIVGPSGVGKSSLINALRNN+
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           R  DA++ DNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPL+GGGYLADTPGF
Sbjct: 301 RGVDAVEGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQKML A+EPA+CSFNDCLHLGEPGC+IKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG MGAQQAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 ----DEDEDD-LEETDPILRAMKNENQ 503
               DEDEDD L++ DPIL+AM+NE Q
Sbjct: 481 DELEDEDEDDSLDKEDPILKAMRNEQQ 505

[Close]

BLAST of IVF0021208 vs. ExPASy TrEMBL
Match: A0A6J1BSR6 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005203 PE=3 SV=1)

HSP 1 Score: 885.9 bits (2288), Expect = 7.6e-254
Identity = 456/508 (89.76%), Postives = 478/508 (94.09%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTA  AAT+S P FGNV+RR F  RCFS+VAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTA--AATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAP LSPQDNPPLSESQAIGTVAAAQANFMRVIVQ+LPSQ S+SSN D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            E SGSLE DSSESS LGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QR SEILDPPVANVDHLLVLFSMDQP+LE FTLTRFL+EAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQT TGLD+LAYILRDQTTVIVGPSGVGKSSLINALRNN+
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 RAADALDTDNWFDP-ILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPG 360
           R  DA++ DNWFDP ILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPL+GGGYLADTPG
Sbjct: 301 RGVDAVEGDNWFDPQILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPG 360

Query: 361 FNQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQ 420
           FNQPSLMKITKQSLAQAFPEIQKML A+EPA+CSFNDCLHLGEPGC+IKGDWERYQYYFQ
Sbjct: 361 FNQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQ 420

Query: 421 LLDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDE 480
           LLDEIRIREEFQLRTFGTKREGDVRIKVG MGAQQAEPRLELKKHRRQSRKRVNQSIL+E
Sbjct: 421 LLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNE 480

Query: 481 L----DEDEDD-LEETDPILRAMKNENQ 503
           L    DEDEDD L++ DPIL+AM+NE Q
Sbjct: 481 LDELEDEDEDDSLDKEDPILKAMRNEQQ 506

[Close]

BLAST of IVF0021208 vs. NCBI nr
Match: KAA0064736.1 (putative ribosome biogenesis GTPase RsgA 1 [Cucumis melo var. makuwa])

HSP 1 Score: 985 bits (2546), Expect = 0.0
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF
Sbjct: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DEDEDDLEETDPILRAMKNENQ 502
           DEDEDDLEETDPILRAMKNENQ
Sbjct: 481 DEDEDDLEETDPILRAMKNENQ 502

[Close]

BLAST of IVF0021208 vs. NCBI nr
Match: XP_008445496.1 (PREDICTED: putative ribosome biogenesis GTPase RsgA 1 [Cucumis melo])

HSP 1 Score: 980 bits (2533), Expect = 0.0
Identity = 500/502 (99.60%), Postives = 500/502 (99.60%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAALAATSSFPVFGNVIRRVF FRCFSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFNFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESS DD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSYDD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF
Sbjct: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DEDEDDLEETDPILRAMKNENQ 502
           DEDEDDLEETDPILRAMKNENQ
Sbjct: 481 DEDEDDLEETDPILRAMKNENQ 502

[Close]

BLAST of IVF0021208 vs. NCBI nr
Match: XP_004144195.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucumis sativus] >KGN47617.1 hypothetical protein Csa_018974 [Cucumis sativus])

HSP 1 Score: 941 bits (2432), Expect = 0.0
Identity = 478/504 (94.84%), Postives = 492/504 (97.62%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAA+AATSS PVFGNV+RRVF FRCFSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAAIAATSSIPVFGNVLRRVFNFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFS+S NDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           LERSGSLE+DSS+SSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLEDDSSKSSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QR SEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGYDPLFCSVQTG GLD+LA+ILRDQTTVIVGPSGVGKSSLINALRN+N
Sbjct: 241 TLVSWKSRLRSWGYDPLFCSVQTGAGLDSLAFILRDQTTVIVGPSGVGKSSLINALRNSN 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           RA DA DTDNWFDPILGSKWFE+QRVAEVSTRSGRGKHTTRHVSLLPL+GGGYLADTPGF
Sbjct: 301 RATDASDTDNWFDPILGSKWFEEQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQKML ASEPAKCSFNDCLHLGEPGC+IKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLHASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG MG +QAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGEMGVKQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DE--DEDDLEETDPILRAMKNENQ 502
           DE  DEDDLEET+PILRAMKNENQ
Sbjct: 481 DELEDEDDLEETNPILRAMKNENQ 504

[Close]

BLAST of IVF0021208 vs. NCBI nr
Match: XP_038885175.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Benincasa hispida] >XP_038885176.1 small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 903 bits (2333), Expect = 0.0
Identity = 459/497 (92.35%), Postives = 478/497 (96.18%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRH T A+AATSS PVFGNV+RRVF FRC SIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHQTTAIAATSSIPVFGNVLRRVFNFRCLSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQ LPSQ S+SSND+
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQALPSQLSDSSNDN 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            ERSGSLENDSSESS LGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIEN+F
Sbjct: 121 SERSGSLENDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENIF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QR SEIL+PPVANVDHLLVLFSMDQP+LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILEPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGYDPLFCSVQT TGLD+LAYILRDQTTVIVGPSGVGKSSLINALR+N+
Sbjct: 241 TLVSWKSRLRSWGYDPLFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNS 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           RAADA+D DNWFD ILGSKWF+DQRVAEVSTRSGRGKHTTRHVSLLPL+GGGYLADTPGF
Sbjct: 301 RAADAIDGDNWFDQILGSKWFKDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMK+TKQSLA+AFPEIQKML ASEPAKCSFNDCLHLGEPGC+IKGDWERYQYYFQL
Sbjct: 361 NQPSLMKVTKQSLARAFPEIQKMLLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG MGA+QAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGARQAEPRLELKKHRRQSRKRVNQSILEEL 480

Query: 481 DE--DEDDLEETDPILR 495
           DE  DEDD EE DPILR
Sbjct: 481 DELEDEDDSEENDPILR 497

[Close]

BLAST of IVF0021208 vs. NCBI nr
Match: XP_022132325.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 890 bits (2299), Expect = 0.0
Identity = 456/507 (89.94%), Postives = 478/507 (94.28%), Query Frame = 0


Query: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHTAA  AT+S P FGNV+RR F  RCFS+VAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAA--ATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120
           LRAKHTFKDYSSLAP LSPQDNPPLSESQAIGTVAAAQANFMRVIVQ+LPSQ S+SSN D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            E SGSLE DSSESS LGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QR SEILDPPVANVDHLLVLFSMDQP+LE FTLTRFL+EAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300
           T+VSWKSRLRSWGY+PLFCSVQT TGLD+LAYILRDQTTVIVGPSGVGKSSLINALRNN+
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360
           R  DA++ DNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPL+GGGYLADTPGF
Sbjct: 301 RGVDAVEGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIQKML A+EPA+CSFNDCLHLGEPGC+IKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG MGAQQAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 DE----DEDD-LEETDPILRAMKNENQ 502
           DE    DEDD L++ DPIL+AM+NE Q
Sbjct: 481 DELEDEDEDDSLDKEDPILKAMRNEQQ 505

[Close]

BLAST of IVF0021208 vs. TAIR 10
Match: AT1G67440.1 (Minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 605.1 bits (1559), Expect = 5.0e-173
Identity = 314/448 (70.09%), Postives = 370/448 (82.59%), Query Frame = 0


Query: 60  LLRAKHTFKDY-SSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSN 119
           +LRAKH  K+Y SSL+PVLSP+  P L ESQAIGTVA AQANFMRVIVQ + +  S +S+
Sbjct: 1   MLRAKHIGKNYSSSLSPVLSPEHKPSLLESQAIGTVATAQANFMRVIVQDVAN--SVTSD 60

Query: 120 DDLERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIEN 179
           DD        NDSS++   GVELLCVV+AVLKKI+RRVLVGDKV+VGSIDWVDRRGMIEN
Sbjct: 61  DD--------NDSSKT---GVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIEN 120

Query: 180 VFQRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVD 239
           VF R+SEILDPPVANVDHLLVLFS+DQP+LEPFTLTRFLVEAEST IPLTL LNK EL+ 
Sbjct: 121 VFHRRSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTRIPLTLALNKTELIS 180

Query: 240 EETVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRN 299
           EE + +WK RLR W Y+PLFCSV T  GLD +A++LRDQT+VIVGPSGVGKSSLIN LR+
Sbjct: 181 EEELETWKIRLRGWNYEPLFCSVGTKDGLDDIAFVLRDQTSVIVGPSGVGKSSLINVLRS 240

Query: 300 NNRAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTP 359
           N+     ++ +NWF+P+LG+KWF+DQRV EVS+RSGRGKHTTR+VSLLP++ GGYLADTP
Sbjct: 241 NH-GGGVVEDENWFEPMLGNKWFDDQRVGEVSSRSGRGKHTTRNVSLLPVSEGGYLADTP 300

Query: 360 GFNQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYF 419
           GFNQPSL+K+TK SLA  FPEI+ M+   E  KC F DCLH+GEPGC++KGDWERY YY 
Sbjct: 301 GFNQPSLLKVTKHSLAHCFPEIRNMI---ESEKCGFRDCLHIGEPGCVVKGDWERYPYYL 360

Query: 420 QLLDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILD 479
           QLLDEIRIREEFQLRTFGTKRE DVR KVG MG + AEPRL  KKHRR+SRK+  Q+++ 
Sbjct: 361 QLLDEIRIREEFQLRTFGTKREDDVRYKVGDMGVKHAEPRLMPKKHRRESRKKTKQTMIS 420

Query: 480 ELDEDEDD----LEETDPILRAMKNENQ 503
           ELDE ED+      E DPI++A++NEN+
Sbjct: 421 ELDEFEDEDSDLYIENDPIVQAIENENK 431

[Close]

BLAST of IVF0021208 vs. TAIR 10
Match: AT1G67460.1 (Minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 283.9 bits (725), Expect = 2.5e-76
Identity = 157/271 (57.93%), Postives = 191/271 (70.48%), Query Frame = 0


Query: 29  IRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNLLRAKHTFKDYSSLAPVLSPQDNPPLSES 88
           IRR F F       +Q NP NV+  P P+K +LR        S LAPVL   + P L E 
Sbjct: 30  IRRSFYFLS---AIRQENP-NVTKNPHPNKTILR--------SFLAPVLPLDEKPNLVEL 89

Query: 89  QAIGTVAAAQANFMRVIVQTLPSQFSESSNDDLERSGSLENDSSESSMLGVELLCVVKAV 148
           QAIGT+A A A++MRVIVQ +P                 E+D+ E   +GVELLCVV+ +
Sbjct: 90  QAIGTIATALADYMRVIVQDVP-----------------ESDNGEDDKIGVELLCVVRKL 149

Query: 149 LKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRKSEILDPPVANVDHLLVLFSMDQPRL 208
           LKKI R VLVGDKV+V  +DWVDRR  I NVF R SE+LDPPVANVDHL++LFS+DQP++
Sbjct: 150 LKKIGRTVLVGDKVLVDKVDWVDRRAKIINVFDRVSEVLDPPVANVDHLVILFSLDQPKI 209

Query: 209 EPFTLTRFLVEAESTGIPLTLGLNKLELVDEETVVSWKSRLRSWGYDPLFCSVQTGTGLD 268
           +PFTLTRFLVEAES GI +T+ LNK ELV +E V SWK RLRSW Y+PLFCSV T  G+D
Sbjct: 210 DPFTLTRFLVEAESIGIRITVALNKCELVTQEEVESWKIRLRSWNYEPLFCSVGTKVGID 269

Query: 269 TLAYILRDQTTVIVGPSGVGKSSLINALRNN 300
            +A+ LR+QT+VIVGPSGVGKSSLIN LR++
Sbjct: 270 EIAFNLRNQTSVIVGPSGVGKSSLINILRSS 271

The following BLAST results are available for this feature:

BLAST of IVF0021208 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4V399	7.0e-172	70.09	Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Arabidopsis t...	[more]
F4HTL8	3.6e-75	57.93	Small ribosomal subunit biogenesis GTPase RsgA 2, mitochondrial OS=Arabidopsis t...	[more]
Q8YUA3	4.5e-70	41.31	Small ribosomal subunit biogenesis GTPase RsgA 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
Q3MG79	3.8e-69	40.81	Small ribosomal subunit biogenesis GTPase RsgA OS=Trichormus variabilis (strain ...	[more]
B0JW21	3.0e-66	37.86	Small ribosomal subunit biogenesis GTPase RsgA OS=Microcystis aeruginosa (strain...	[more]

BLAST of IVF0021208 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEI9	9.2e-284	100.00	Putative ribosome biogenesis GTPase RsgA 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BCE1	3.0e-282	99.60	putative ribosome biogenesis GTPase RsgA 1 OS=Cucumis melo OX=3656 GN=LOC1034884...	[more]
A0A0A0KGV4	1.5e-270	94.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365180 PE=3 SV=1	[more]
A0A6J1BS55	3.1e-255	89.94	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 OS=Mo...	[more]
A0A6J1BSR6	7.6e-254	89.76	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1 OS=Mo...	[more]

BLAST of IVF0021208 vs. NCBI nr


Match Name	Identity	Description
KAA0064736.1	100.00	putative ribosome biogenesis GTPase RsgA 1 [Cucumis melo var. makuwa]	[more]
XP_008445496.1	99.60	PREDICTED: putative ribosome biogenesis GTPase RsgA 1 [Cucumis melo]	[more]
XP_004144195.1	94.84	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucumis sativus...	[more]
XP_038885175.1	92.35	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Benincasa hispi...	[more]
XP_022132325.1	89.94	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 [Momo...	[more]

BLAST of IVF0021208 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67440.1	5.0e-173	70.09	Minichromosome maintenance (MCM2/3/5) family protein	[more]
AT1G67460.1	2.5e-76	57.93	Minichromosome maintenance (MCM2/3/5) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010914	RsgA GTPase domain	PFAM	PF03193	RsgA_GTPase	coord: 179..365 e-value: 2.8E-57 score: 193.2
IPR010914	RsgA GTPase domain	PROSITE	PS50936	ENGC_GTPASE	coord: 192..361 score: 40.68605
IPR004881	Ribosome biogenesis GTPase RsgA	TIGRFAM	TIGR00157	TIGR00157	coord: 156..299 e-value: 6.2E-35 score: 118.8
IPR004881	Ribosome biogenesis GTPase RsgA	PANTHER	PTHR32120	SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA	coord: 79..486
IPR004881	Ribosome biogenesis GTPase RsgA	HAMAP	MF_01820	GTPase_RsgA	coord: 90..428 score: 29.830601
IPR004881	Ribosome biogenesis GTPase RsgA	CDD	cd01854	YjeQ_EngC	coord: 192..422 e-value: 8.41425E-82 score: 251.163
None	No IPR available	GENE3D	1.10.40.50	Probable gtpase engc; domain 3	coord: 367..429 e-value: 2.6E-13 score: 51.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 458..502
None	No IPR available	PANTHER	PTHR32120:SF11	SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED	coord: 79..486
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 177..365 e-value: 6.8E-49 score: 167.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 186..427
IPR030378	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain	PROSITE	PS51721	G_CP	coord: 183..363 score: 48.976669
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 138..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021208.2	IVF0021208.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding