IVF0021158 (gene) Melon (IVF77) v1

Overview
NameIVF0021158
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 6436140 .. 6442358 (-)
RNA-Seq ExpressionIVF0021158
SyntenyIVF0021158
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCATAGGACAGCTCGGACAGGTGCGCACGGCTCGGGGAAACACGTACGGCTCGCGCACGTGTTTGGCTGGGGTGGCTTGGATCTTCGCGCAACTTGCAGGGATGCGCGTGCGGCTGGCCGCTGGCGGCTGGGCTTCACGCGGCTATGGAGGCACGCAGACTTTTAGAGGCACAAAGGGCTATAGGTAGATCAGCTGGGGGAGGAAATCTTAGGGTTTCTTCCTCTTTTTCCATTTTTTCTTTCTTTTTTTTCTCTTGTGCAGGGGTCCCTATGCCTATTTAAACACCAATAGGATACCAATAAAATTTCTCTTTCCCTTTTTCTTATTTTATTTCAAACAACAACTTCTCTCTCTCCTCAAATAAATCTCACTAAATCCCCTTTTTCAAATCAACTTCAACCAACACATCAATCTCTTCTTTGTCCCCTGTTTTTTTTCAAATAAGAATATGACCATTAACCTTAACCAAATAATTAAATTTTCTCTCTTCTCACCCAATTATCTTTATCTTCAACAAATATCTCTACCAATTTTATTATCCAAATAAATTAATTATATTATCCTCAAAACTTAATTAATTAAATTACCAAAAATATAATTAATCAAGTTTCCTCAATTACACCCAAAGTTTCAATAATTACACTTAAGACAATAAATTAAATTCCAAATTTTGGGGCGTTACAATCTTCCTTCCTTTGAAAAACTTTTGTCCTCGAAAGTTCTAATTCTCGAATAGCTCGAGGTACTGGGCTCTCATGTCCTCTTCTCTCTCCCATGTGGCCTTTTCAACACTGTGGTTTCACCAAAGAACTTTTACCAGTGAAATTCCTCGATTACGGAGCAACTTGATCTCTCTTGCCAAAATCTCAACAGGTTGCTCCTCGTAGCTCAAGTTCTCATTCATTTGCACTGGCTCGAAGTCAACTACATGCGTCGGGATTGCGACATACCTCCTTAGCATGGAGACATGGAATGTGTCATGCACTGCAGAAAATAATGGGGGTAACGCTAAACGATAAGCTTCAGGGCCAATTCGCTTCAATATCTCAAATGGCCCTACAAAACGTGGACTTAGCTTTCCCTTCTTTTCAAACCTCAGAACACCCTTCATAGGTGCTACCTTCAGAAAAACCATGTCTCCCACATCAAACTTGAGATCCTTACGCCGTACATCAGCATAACTCTCTGCCTGCTCTCTGCTGTCAATATACGAGCTATAATCTTTTGTATGGCTGCATTGGTGGTCTGCACTAACTCAGGACCTAGCAGTCTCTGTTCGCCTATTTCCCCCAACAAACAGGGGATCTGCAAAACCTACCATATAGAGCTTCAAACGGTACCATACCAATGGTGGCCTGGTAGCTATTATTATAGGCGAACACCATCAAATGTAAATGGGAGTCCCAACTCCCTGAAAACTCTAGCACACAAGCTCGCAACATGTGCTCTAAAATCTGATTCAACCTTTCTGTTTGACCATCAGTTTGGGGATGAAAAGCTTTTCTGAAGTCTAACCTCGTGCCCAATGCAAACTGAAGTCCTTTCCAAAACTTCGATGTAAAACGAGCATCTTTGTCAGAAACGATAGATACAAGTACTCCATGCAGTCTCACTATCTTGGTCATATATAATTGTCCCCCTTACTGGCAGTGTAATTGGATTTCCCTAAAACAAAGTGGGCCGACTTCGTAAGTCTGTCAACAATAACCCAAATGACTGTATAGCCCTTTAGAGTCCTGGGCAGTCCTGTAATGAAGTCCATCGACACGTTCTCCCATTTCCATCCTGGCACACTCAAGGGTTGCAACAACCCTGCTGGCTTCTGCCTAGGTGCCTTCACCTGCTGGCACACCAAATATCTAATGACAAAATCTGCAACTTCTCTCTTCATGTTTCTCCACCAATAGACATACTTCAAGTCTTGGTACTTCTTGGTATTTTCAGGGTGCATAGTAAATGGATAACTGTCAGCCTCAATCAAAAGCTTTGTCTTGACTGCACTGTCTTCCGGCACGCACAAACATCCCTCAAACGTAAGGCCATCATCGGAGGATATAGAGAAATCCTCACCTTGCTCTCTACCAAACGACGTTTCTTGACCAGATAAGGATCATTTAGCTGAGCAACAACAATCTTTTGTCTCAAGGTCGGTTGCACTGACAACTTAGCCAACTGTGAGGTAACTTCCCCTACTGAGACTGCAATCTCGATTCTCTAAAAATCTCTGAGTAAGGGAGCTTGCTTGGTGATAAGCGTTGCTGAATGTGCAACCTTCTTACTCAGCGCATCAGCTACTACATTTGCCTTACGTGGGTGATACAGAATCTCGCAGTTATAATCCTTCACTAACTCAAGCCATCTTCTCTGTCTTAAGTTCAACTCCTTCTAGGTAAAGAAGTACTTTAGGCTCATATGGTCAGTGAAAATCTGTATCTTCTCACCGTATAGATAATGTCTCCATATCTTCAGAGCAAAAACCACAGCTGCCAAATCTAGGTCATGGGTAGGGTAGTTCTGTTCATGACTCTTCAACTGACGAGAGGCATAAGCAACTACCTTACCTTGCTGCATCAGAACATAACCCAATCCTTTCTTTGAGGCATCACTGTAGATCACGAAACTTCCGGATCCATCTGGTACTGTCAGAATTGGTGCAGACACAAGCTTCTGCTTAAGTTCCTAGAAGCTACTCTCATAAGCTGGGCTCCAAACAAAAGGAGTCCCCTTCCTGGTCAATTTAGTCAAGGGACTGGCTATACGAGAGAAGTCTTCCACGAACCTCCTGTAGTAACCTGCAAAACCAAGGAAACTACGAATCTCGCTAACTGTAGACGGTCGAGGCCAACTGGTAACCGCTTCGATCTTTGTTGGGTCCACAGAAACTCCCTCACTGGAAACCACGTGGTCGAAAAAAGTCACCTTCTTCAGCCAGAACTCACACTTGGAGAACTTGGCATATAACTTGTTAGCTCGAAGAGTTTCCAAAACCTAGTGCAAATGCTTCTCATGCTTAGCCTCAGTCTTTGAGTAAATCAAAATGTCGTCAATTAAAACTATGACAAACGTGTCTAAGAAATCCTTAAACACCCTGTTCATCAAGTCCATGAATATTGTAGGAGCATTAGTCAAACCAAAAGACATCACAACGAACTCATAATGCCCGTATCTGAAATGGAAAGCGATCTTAGGAATATCTCTATCCCTGATCCTCAACTAGTGATAGCCTAATCGCAGGTCAATCTTAGAAAAGACGGTGGCTCCTTGCAACTGATCGAACAAATCATCAATCCTGGGCAAGGGGTAGCGGTTCTTGACTGTCACCTTGTTCAGCTCTCTGTAGTCAATGCAAAGGCGCATCGACCCATCCTTCTTTTTCACAAACAACATTGGTGCTCCCCAAGGTGACACACTGGGTCGAATGAAACCCTTGTCCAGCAACTCCTGTAGTTGTACCTTCAGCTCCTTTAGCTCTGCTGGAGTCATTTTGTAAGAGGCCCTCGAGATAGAAGCAATGTCTGGCTCTAACTCGATGGCGCAGTCTATCTCCCTGGCAGGCGAAAGTCTTGGAAGCTCGTTGGAGAAAACATTGGGGTACTCCCTTACCACTGGTTCAGAGGACAGGGAAACTTCTGGTTCTCGGTATCTACTACGCTTACCAAGATGCTCCAGGTACCCTGGCTGAGTAGATTACTAGCCTTCATAGCTGATATGACCTTGGGTACACATACGATTCCTGCCCCCTTAAATTTGAAACTAGTCCAGAGGGAGGGTAAAAAATGTCTTCCTTACGAAAATAGTTTATACTTGCATGGTTAGCAGACAACCAATCCATGCGTAGGATTACATCGAAATCCTGCATGTCTAATACTAGTAAGGTCACATCTAACATCTGGTTTGCTATCTCTACCCGACATGCCTTTATCTTTTTTTAGACAACAAAACCTCCCCAGATGGAGTAGAAACAGACAAAACACCATTCAACGGTTCTACCTCTAAACCAACATGCTGAACGAACACAAAGGATATGAACGAATGGGATGACCCGGAGTCAAATAGCACAAAAGCATAGTGTCCCAAGATTAGGAGCGTACCTGTCACCACTGTACTAGCTCGCTCGGCCTCCTGACGGGTAGTGGCAAAAACTCTTCCCAATTGGAAAGCGGGAGGCTGGTGTAGAGTAGTCTCAATGGGTTTTTTAGGACAAGCAATAGCGGTATGCCCTAGTTGTTTGCACCTGAAGCAAACTCCGCTCCCGGCCAAGCGACGACCTACATGGACTCTCCAACAGCTAGGACAAATGGGTAGTTATCTCAAGGCTCTCCTGGCTGCTGCAAGCTCCCGACGATGCCGCTAGAAAATACCTCACGACCTTAGATTTCGCTACGGTATGAAGTCAGGCTGCAACTCCACCTTCCTCTTCTGTCCAAGGGCTAACCCTCTGCCAGCAGCCTTAGACGGATCAGCTCTCTCGTGCAGGCTCAAATCTAGCCCCAGGTGTAAAGCATCAGCATGAGTAGTTGGTCTGAGGGCTTGAACAATACCCTGGAGGTCTAGTCTAAGACCTCTGACAAACTTCTCGGTCCTGGCGTCCTCATCCTTCACTACATCAGGGCAAAATGGGACAACATATCAAACTCAGCATCGTACTGCTCCACAGTCATGTCGTCTTGTTCCAAGTTCAAGAACTCTTGCTGCTTCGCGTACTTTACATTGGCAGAAAATAACTTAGCATAGAAGCTCTCCTTGAACTGCTCCCAGGTTATCTTGCTGACATCTCCACCCAGCATCCTCTTAGAAGTCTCCTACCACACAGTGCCTCTGTCCTCCGAGAAGAAAACTGCACACTGAACCTTCTGGTCCTCAAGGCATTTCGTGTACCTGAAGATCTTCTCTATAGAGGTCAGCCACATCTGGGCCTTGGTGGGGTTATCCATGGATCCGTCAAATGTTTTAGGATTGTACTTCCTAAAGTTTCTCAGGTGTTTGGCCTCAGCCGACAGTTGAATCGACGCGAGCTAAGCTCCCATAGGGGCTAGATGAGGGACGGTCTAGGCCTGAACACGTTCCCGAACACGTGCAACATGTGATCCCGTAGGAACAAAATTTGGTCTTCGTTGACCCTAAGGAACACTTAGGACAAGCTGGTCTGTAGTGTACCCGAAGGAAACACTAAGACAATTGGGTTGCGGACGATCCCGTCGAATTACCAGAATCATGTCTATATCAATGCCAGACTGGCGGTCCCGTCGGACTACACAGTCCTAAATAGGTGGTGATCCACAGGGACACCCATGCAGGTACGACTCTAATAGGATAAGCTAACATGCACCCTAACCATAGCATACACGTAACATAGCATGTCAAACCATATGTCAATTCACATCATCATGTCAAATCATATCATCATGTCAAACCATAAAATCATGTCATATCATATCCTCATTAATTGCCCTGCCGTTATGCAGTCGAGTCATCAATGTGCATAACTAATAATGTATGCGATCTCTTAATTCTACTCGTAGGTCTAGTAGTAGAATCTCTTACTTGGGGATTTGCTCAACGAATTCCAGCAGTAGAATCACGCTTTCCAAGCAACGAAGTCCTAAATGGTTAGAAAACACCATTTCTCTAAACTTAATCATCAAACGACCAAGGACCCAAAACCAGTTGAAATAACTTACCCGAGGTCGAGGTTGCAACGCTTGAGCCCTTAACTGGAGAAATCCCACGCTCCAAAATTACTTGGTCCAAACTGTCTTTTAAGAAGAATAATTTAATTTAACCCAAAATTAAATTATTTAAGATCCAATTTTTTTTAAATCTTAGTTCGGTGTTCCAAAGCCCAATCAACTTACCAAACAGGTGGAAAAAGGACACAAAATTAGGCTTGTGGCTCGAAATAGGTGAAGCGACTAGGTGACTCGGCTAGAAAGAAAAAGGTGGCTCGGACAGGCAGCTCATGCGCGTAAAGCGGCTCGGGGAAACGCGTACGGCTTGTGCACATGCACAGTTGAGGCAACTCGGCTCTTCGCGCGACTTGCAGGGATGCGTGTGCAGCTGGCGGCTGGCGGTTGGCGGTTGGGATTCACGTGGCTATGGAAGCGCGTGATCTTCTGAAGGCGTGGAACGGCTGGAGGCGGATCGGCTCGGGTTTTCAGGTATGGGCGACGGAATGAGCGCTCGGTCTTCTGATGACACAACGCTGACAAGGTAG

mRNA sequence

ATGCGCATAGGACAGCTCGGACAGGTGCGCACGGCTCGGGGAAACACGTACGGCTCGCGCACGTGTTTGGCTGGGGTGGCTTGGATCTTCGCGCAACTTGCAGGGATGCGCGTGCGGCTGGCCGCTGGCGGCTGGGCTTCACGCGGCTATGGAGGCACGCAGACTTTTAGAGGCACAAAGGGCGTGGAACGGCTGGAGGCGGATCGGCTCGGGTTTTCAGGTATGGGCGACGGAATGAGCGCTCGGTCTTCTGATGACACAACGCTGACAAGGTAG

Coding sequence (CDS)

ATGCGCATAGGACAGCTCGGACAGGTGCGCACGGCTCGGGGAAACACGTACGGCTCGCGCACGTGTTTGGCTGGGGTGGCTTGGATCTTCGCGCAACTTGCAGGGATGCGCGTGCGGCTGGCCGCTGGCGGCTGGGCTTCACGCGGCTATGGAGGCACGCAGACTTTTAGAGGCACAAAGGGCGTGGAACGGCTGGAGGCGGATCGGCTCGGGTTTTCAGGTATGGGCGACGGAATGAGCGCTCGGTCTTCTGATGACACAACGCTGACAAGGTAG

Protein sequence

MRIGQLGQVRTARGNTYGSRTCLAGVAWIFAQLAGMRVRLAAGGWASRGYGGTQTFRGTKGVERLEADRLGFSGMGDGMSARSSDDTTLTR
Homology
[Close]
BLAST of IVF0021158 vs. ExPASy TrEMBL
Match: A0A5D3B910 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00080 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.3e-04
Identity = 36/70 (51.43%), Postives = 40/70 (57.14%), Query Frame = 0 

Query: 8   QVRTARGNTYGSRTCLAGVAWI-FAQLAGMRVRLAAGGWASRGYGGTQTFRGTKGVERLE 67
           Q  TARGN + S     G + +    LAGMRVRLAAGG  SRGYGG +  RG K   RLE
Sbjct: 54  QTHTARGNVHDSHASSTGGSSVPRVPLAGMRVRLAAGGSTSRGYGGVRMARGAK---RLE 113

Query: 68  ADRLGFSGMG 77
           A     SG G
Sbjct: 114 AGVAQVSGFG 120

[Close]
BLAST of IVF0021158 vs. NCBI nr
Match: KAA0032400.1 (hypothetical protein E6C27_scaffold219G002780 [Cucumis melo var. makuwa] >TYJ96350.1 hypothetical protein E5676_scaffold1159G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 1.40e-05
Identity = 36/70 (51.43%), Postives = 40/70 (57.14%), Query Frame = 0 

Query: 8   QVRTARGNTYGSRTCLAGVAWI-FAQLAGMRVRLAAGGWASRGYGGTQTFRGTKGVERLE 67
           Q  TARGN + S     G + +    LAGMRVRLAAGG  SRGYGG +  RG K   RLE
Sbjct: 54  QTHTARGNVHDSHASSTGGSSVPRVPLAGMRVRLAAGGSTSRGYGGVRMARGAK---RLE 113

Query: 68  ADRLGFSGMG 76
           A     SG G
Sbjct: 114 AGVAQVSGFG 120

The following BLAST results are available for this feature:
BLAST of IVF0021158 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0021158 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3B9105.3e-0451.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0021158 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032400.11.40e-0551.43hypothetical protein E6C27_scaffold219G002780 [Cucumis melo var. makuwa] >TYJ963... [more]
BLAST of IVF0021158 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021158.1IVF0021158.1mRNA