IVF0021128 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGACGTCAAGTGCATCATCGCCGAGAGGGACGTGTTTGATCATTGGGTCCGGGTAAGAGTATGAACATAATTATATGACTAACTGGATTTTATGGAATACTAATTGCTTATTTTTTTGTGTTTTTTCTAGACGCACCCTGCAGCAAAAGGACTCTTGAACAAGCCATTTTCGCATTACGACGCATTATCGTCGTGTTTGGGAAAGATCGAGCGACGGGGGCCTGTGCGGAGACCTTTGCAGACATTGGTTCGAACGTACCGACAGACAACGATAGTGTCCCCATAGAGGATGACATCGATATGGAATTCCCCGCTATGTACAGCCTGAGGATGAACATGTCCCCTGAGGACATGATGGGCGGTAGATAA ATGATGACGTCAAGTGCATCATCGCCGAGAGGGACGTGTTTGATCATTGGGTCCGGGACTCTTGAACAAGCCATTTTCGCATTACGACGCATTATCGTCGTGTTTGGGAAAGATCGAGCGACGGGGGCCTGTGCGGAGACCTTTGCAGACATTGGTTCGAACGTACCGACAGACAACGATAGTGTCCCCATAGAGGATGACATCGATATGGAATTCCCCGCTATGTACAGCCTGAGGATGAACATGTCCCCTGAGGACATGATGGGCGGTAGATAA ATGATGACGTCAAGTGCATCATCGCCGAGAGGGACGTGTTTGATCATTGGGTCCGGGACTCTTGAACAAGCCATTTTCGCATTACGACGCATTATCGTCGTGTTTGGGAAAGATCGAGCGACGGGGGCCTGTGCGGAGACCTTTGCAGACATTGGTTCGAACGTACCGACAGACAACGATAGTGTCCCCATAGAGGATGACATCGATATGGAATTCCCCGCTATGTACAGCCTGAGGATGAACATGTCCCCTGAGGACATGATGGGCGGTAGATAA MMTSSASSPRGTCLIIGSGTLEQAIFALRRIIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR Homology
BLAST of IVF0021128 vs. ExPASy TrEMBL
Match: A0A5A7T069 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00020 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.9e-31 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of IVF0021128 vs. ExPASy TrEMBL
Match: A0A5D3BUJ4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00420 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.2e-17 Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 0
BLAST of IVF0021128 vs. ExPASy TrEMBL
Match: A0A5A7VAC3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001190 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.2e-17 Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 0
BLAST of IVF0021128 vs. ExPASy TrEMBL
Match: A0A5A7UA62 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00960 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13 Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of IVF0021128 vs. ExPASy TrEMBL
Match: A0A5A7UI55 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00330 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13 Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of IVF0021128 vs. NCBI nr
Match: KAA0034865.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK27334.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (362), Expect = 4.31e-39 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of IVF0021128 vs. NCBI nr
Match: TYK02844.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 2.06e-22 Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 0
BLAST of IVF0021128 vs. NCBI nr
Match: KAA0064184.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.7 bits (239), Expect = 1.51e-21 Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = 0
BLAST of IVF0021128 vs. NCBI nr
Match: KAA0050379.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK03592.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.1 bits (209), Expect = 1.10e-18 Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of IVF0021128 vs. NCBI nr
Match: TYJ98397.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 2.26e-18 Identity = 43/61 (70.49%), Postives = 48/61 (78.69%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|