IVF0021125 (gene) Melon (IVF77) v1

Overview


Name	IVF0021125
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-H2 finger protein ATL8-like
Location	chr03: 20031450 .. 20037385 (+)
RNA-Seq Expression	IVF0021125
Synteny	IVF0021125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATTCCATTTTCCTACACCACTTTTGTATTGCAATTCCACTCTCTCAGTGATTCCAATTTAAAACTGTATTATATTGGTGGGGTTTCTTGAGTTTCTCTCTCAATCTCAATCCAAAGTCCAAAATTTTCCAAATGGGTTCTCTCCTTTTCTGTTTTTGCCAATTCCCAATCCCTCCACCATGGATTCAATCTTTTTCTCTGGGATTTTTGCACTCTCTCCCACAATAAAACAGTCACTATCTGATATCGACACCCACCAGTTGATTAAACTTTAGTTATACTTCCCACTTCCGTGCAAATTAATTCAAAATTTTAGCCTCTTTTTGCCTTTCCCCAGTTGGGTTCTAGCGTTTTCTTGAAATGATTCATCATGGGAATCAAATTTCGTTTTGGTTTTGGCGTGGATGGGATTGGAATTCCTTCAGATGTTGAAGCTGCCAAAGTTAGCACGATTTTAGTTGGCAATAGAAGACACTGTTGAATTGTGGAAACTGTTTTCATTGGGAAAAATTTGAGTTTCGATTGGTGTAGAAGAGAAATTTTGAGTTGAGGAGAAAAGGGTTTTTGTAGAATGATGTCTTCGGGAGTGAATTTGGTGATGACAGTGATTGGGTTCACTGTGAGCACTTTGTTCATCGTGTTCGTTTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGGTGAGCATGTTTTCTCTTATTTAATTCCCTTCCAGATTTGATGGGGAGGATATATGTATTTTAATTGTCTACTGGTTGGTTGTTTTTGTTTGTGTATGTTAGTCTCCAAGCAAAAGATGGGATAATTTCCCTTCTAGCTCTTCTCCCTTTTTCTTCCTTTTCTGGGTTTTGATTTTGTATGCTAATTCACATGCTATGTTTATCACTGGAAAGTGGATATGATTGCTTCTCTGCATTATGGTTGTAGTGTTATTACTTCCATACTTGCCTCTCTGCCATTTTATCGAAGTTTCAGCATTCTTTTCATGTTGTGGTTAATTCCTTCGTTTTGATTTTGCTCCCTTTTTGCTCATTCTTTTTTGGTTTGCTGGGTCAGTTTCCTAGGCTTCATAGGTCTGGTAATGCGTAATCTTCATAGCCTTTTTGCATTGTCGCTTTTAGTCAAATACTAATGGATTGGGAGGCTCTACCTAAACAAAAAGGGTCTCTTATACTCGATTCTTGTTTGTTCTCTCAGGCAATGGTTGTGCATTTCTATTTCACATTTGGTTGTTGTCCATTCCTTTTATAAATATACTGCTTTTTAGATTTTTTTCAGGCTTTATGTGATTTATTTTCTTTGTTTGTTTTTTCTTATATAAATATATATATACTGAGAAAAAAATTTGAAAGAATGGACAGGCAAACAAAAAGGAAAACCCCACAAAAACAAATCAAATTACAAGATAGGGCTCCAATCAACAGAAATAAGACCTAAAGAATAATTACAGATGATCTGAGAAACTGAAGGTCTGAGAGAATTGCTAGAAAAACTCTCAGTATCTTGTTTACCCTGTCAATTGGGCCTTTTATATTTTGGGTATTTCATTTAATCAATGAAATTGTATCTTATCTAAGAAAAATCTTAGAAATTGTATCTTATCTAAGAAAAATCTTTCTTAAATTTATTGTTTATCTTGCCCCGACAAAATAGCACACAGACTAGCCTTTACTACAATTTTTTTGTGGACATCTTTTATTTACTCGTTGAATTTCTTTGATACAGTTGGAACGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCAACTAAGAAGTATAATGATGATTACTTCTCGTCTATGAGAAATGCTCAGTATGTGCCCCTTCAATTCACAGTTTCTCATTGCATTGATTTTCATGATTTTTTCAAGAAAATCCCTTGGATAAAAAATATATTTGTGTGCATGTGTAAATAGATACACTGCTAGTCGAAAATTACCACTGGAGCATTTTGTAACTAACTGACACGTGAAACGTTATTAATAGTTTATTTAGTACAACAATTGTGAGTAGGGGCGTTGAAAGAAAAGTTGAAAACCGAAACCGAAACCGAATGCATGCAGTTTGGTTCAATTTCGTGTAAATTGAAACCGCTTCTTATGCGGTTCGATTCGGTTTATGACATTAAACCGAACCGAACCGTAAGAGGGTAAGTGATCGTATAGAAAACTAAACAATCGTGTAAGAGGGTAAACGATTACGATCATTTGAAAGCTAAACGATCGCGTAAGAAGGTAAGCGATCGTATAGAAAGCTAAACGATCGTGAAGAGGTTGAACGATCCTATAGAAAGCTAAACGATCGTGTAATAGGTTGAACAATCCTATAGAAAGCTAAACAATCATATAAGAAGTTGAACGATCGTATAGAAAGCTAAACGACCATTAGGAGGTTGTAGGCACATACGTCTATAGTCTGGGACGATTTAAAACCGAACCGCATATGCGGTTTGGTTTTGACTTGGTTTGACACATATAAGCGGTTTGGTTCGATTTCGGATGAGATTTTTTCATTTTGCAGTTCGGTGCAGCTTCAGCTTCAAACAGAACCTTGAACACCCTTAATTGTGAGGATCGAGGGTTGAGCCTTTGACTTGTAGGGAGAAAAGTCATGCCAATTATCATTGAGCTAAAGTCACTTTGGCTAAATATGTTATTATTTGTTTCCTGTGGATAAGATTTTATCAAGGCATCGGAGAAAAGTTTGGATAATGTGTAAATATCATTTTATGTGAAGTATAATGGCTTTATCAATGAAAGGAGAAAGAATTGTGAGTGCATGATTTAGATCAAGAATTGTGAGTGCATGATTTACCTATGGGAATATGATTAGCTTGCAATGAGTCGGTCTTCTAGTTGATTGCTTTTTCCCTAAACATACTCATTTGTGAATATTGGGTGGTTGGATGAGATGTCACAAAACCAGATATTTTACCCCCATCACACTGTTCAGGTGGAAAAGCAGAAAGGAAAAAGCAACTGTTTGGGCCATATAAGGTGTTTCTAGGAATGATTGATGGCCTTTTGAAAATATCTTCAAAAAGTTGGTAGAATAGTGACTTTTTGATGAGATATTTTGGTAAGTTGGCTTGAAACATAGTCCTAATCAGCCTGGGGCCCTTAGCAATAGGTGTGGATTAAGGAATTACTAGTTAAAATCTCATGCTTGGAACAAATGATAATGTGTTAATGGAGTGCTCTCTTTCTCTTTCTTAAATACATATCTACAAATTGTTCAATATGTGATCATTGCATCTTGGATGAAAGGTAGTGGTAACCAATATGGTCATGTTGGAGTGGACCAGGGATAATTCAAGAGCTCCCTATTCTTTTCCTTTACCAAAATTTCCTAAATAATAAAAAATATCCTGCTTCCCTCTCAGCCAACGTACTTGAGCATGTTTACCAAACAATATCTCTCTCATATCCCTCTGATGAGCAACTTAACTAAATGGGCCAAACTCATAAGTTCATGACAGAAACCCTTTCCCTTACTCACAGATCAAGCCTCACTACCCCTCCCCTGGTCCCTCCTCAGCTTTTCTCCTTCCATATACTTACACAATAGGGGTCTATTTCTTATCTAAATGAGAAAAAATTTGAATGGGAAAAAAATTGGAGTAATTGCAAATATAGCAGTTGGGCACAAAATATTAGCAAATACAGCACAATGCAAAAGAATTTGCGAATAAAACAAAATTTAGATATGAATCTCAAAGTCTCATTGATAAACTATGTACGTAAGACTGATGGAGTTAAGTAGTGATAGATGTGCTATTTTTGCAATTTTTGTACACAATTATTATTTTAAATTTTGTACACTTAATTATTAGTCCCAAGAGTGCTACCCATTGCAATTGCCAAAAAAAAAAAATATATTACTTTTATAGTTTGGGCTTTTGTTTGACTTTGGACATCACATTTTGGAATAGAGAGGTAAAGGTTTCCTACTTCCTTTATATTCTATGGTGGTGCTGTTGAAAACGTGAGGCTAGAGATAGGCTGCCTACACCTGAAATATGGCTATAAGTCGTAAAATTACAGTTTATATGCTTTGGTCTATTGAGCTAGATTTTAAAAGTTTAACACACCACCTTGATTATCCAAGTGATCTCAGACTGATTGATAATGTTAGAGAAGTAGTAAGTATCATGGAAACATAAGTGGTCATGGATACTCTTCAAGTGTTCTTTTTTTTTCTTTTATCTGCGAGGAAACAAGGTTTAATCTTCAAATCTTGTCCAAAAGTCATATTGTCTAAATGCTACCTTTTGTTACAGTTCTTGATGGAAAATAAATGGAAATCCTTAAACTAGTGATTACAATTCTTTTGGCAGACCTTTTGGTTTTATGTGAAGCTACATTCTGTGGTTTTGTCATCCATGTTTGTATAGCAAATCATGGAGATGGATCACAGAATATTCAGTGTGCTATTAGAAGCTTTGTGAATTCCTTTAGCCTTGGCTCGTGGAGTTTTGTGTGATTTAAGAACTACTATTTTTGAAGTTTGATTCTTTTCAATAATTTAAAACATAGATTGAGGATGCTTTGTTTGAAATGAGATCCTGTAATCTATCACCGTCCATCTTCCCTGTAGTTTAGCAAATTTAATATACTATCCATAGTTTTCCTATATGCTAGTATTAAATTTTATGCACGACCATGCACCAACTTGGCAGAAATTTAGGACCACTTGAAAGTGAAAGGAAAGGGTCTCTTGGACGAGAAGAATGTCTATGCTAAAATTGAATCCAATTGCATTTGTGACTCTGTTAATCAGATGTCTAACATAGCTTTTATTTGGAGTGACATAGTAGTAATAAAATTGTTGTTTATGAAGTTCTTAGCAGTTTTTTCTCACCTTTTCCTATATTAAAGAGATCATGGAACTGGGAAGTTATTTATTTTTGGAGTTTAACATGTGGGTGGATGATTTGAATTTTTAACCTCGACAAGAGTATATGTCTAAACCAATTGAGCACAAGAACAAGAAGGTATTTATTTTCAATGATATAAAATAGTATTTGGCAACTTTTTTTACTTGGAATGAGTACTTTTTAAGCGAGCTTATTCGTTTGTTGATGAAATTTAACTGATTGGTTTTGGAGAAGGTTACCAGAATATGACAAGCAAATCTTTTAGTACTATTAGTACATAGCGCAGCTAAATTAGATTTTGTTTTGAATGGCAGATGCACAGTTTGCTTGGCAGATTATCATAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCACGTGAACTGCATAGACATATGGCTGCATCAGCACTCAACATGCCCGGTTTGTCGTCTATCGCTACGCGAGGTCCAAGACAAGAAACGAACAATGCAGCCCTTGTTTAGCTCAGCAATTCGCTCTCTCAACTCAGATCCCTGCCGCGGGTTCCCATTAAGAGACCTTGAAAACAATGGGTTGGAACAACCAATCCAAGAGAATCACTACACACCTGGGGCTAATGGAGCAGTGGATCCAATAGAGAACGCTTCCCCATTTATCGAAGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGAGCATCTCTGATAGGACACTGGACCCGATCATATAGAACCGTGTCCTAAAACTAAAAGTAGATGTCCTTCACTTAACTATCTGCTTAGAAAGCTTGTCTATCTTGTTATTTACCACTGTATATAAGTGTTGTTTGTAGTGAATTAATCTGTTGCTGGTTTTTTGGGGCAGTTCTGTTGATTTTTCTTTGTACAACATTAGTTATTATTACACCGTGAACCTTGCTTTTAATAGTTCATCTCTCTCTTTCATATTTCTACCAATGCATGGTGATAGCAGTGTTTTT

mRNA sequence

GAAGATTCCATTTTCCTACACCACTTTTGTATTGCAATTCCACTCTCTCAGTGATTCCAATTTAAAACTGTATTATATTGGTGGGGTTTCTTGAGTTTCTCTCTCAATCTCAATCCAAAGTCCAAAATTTTCCAAATGGGTTCTCTCCTTTTCTGTTTTTGCCAATTCCCAATCCCTCCACCATGGATTCAATCTTTTTCTCTGGGATTTTTGCACTCTCTCCCACAATAAAACAGTCACTATCTGATATCGACACCCACCAGTTGATTAAACTTTAGTTATACTTCCCACTTCCGTGCAAATTAATTCAAAATTTTAGCCTCTTTTTGCCTTTCCCCAGTTGGGTTCTAGCGTTTTCTTGAAATGATTCATCATGGGAATCAAATTTCGTTTTGGTTTTGGCGTGGATGGGATTGGAATTCCTTCAGATGTTGAAGCTGCCAAAGTTAGCACGATTTTAGTTGGCAATAGAAGACACTGTTGAATTGTGGAAACTGTTTTCATTGGGAAAAATTTGAGTTTCGATTGGTGTAGAAGAGAAATTTTGAGTTGAGGAGAAAAGGGTTTTTGTAGAATGATGTCTTCGGGAGTGAATTTGGTGATGACAGTGATTGGGTTCACTGTGAGCACTTTGTTCATCGTGTTCGTTTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGTTGGAACGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCAACTAAGAAGTATAATGATGATTACTTCTCGTCTATGAGAAATGCTCAATGCACAGTTTGCTTGGCAGATTATCATAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCACGTGAACTGCATAGACATATGGCTGCATCAGCACTCAACATGCCCGGTTTGTCGTCTATCGCTACGCGAGGTCCAAGACAAGAAACGAACAATGCAGCCCTTGTTTAGCTCAGCAATTCGCTCTCTCAACTCAGATCCCTGCCGCGGGTTCCCATTAAGAGACCTTGAAAACAATGGGTTGGAACAACCAATCCAAGAGAATCACTACACACCTGGGGCTAATGGAGCAGTGGATCCAATAGAGAACGCTTCCCCATTTATCGAAGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGAGCATCTCTGATAGGACACTGGACCCGATCATATAGAACCGTGTCCTAAAACTAAAAGTAGATGTCCTTCACTTAACTATCTGCTTAGAAAGCTTGTCTATCTTGTTATTTACCACTGTATATAAGTGTTGTTTGTAGTGAATTAATCTGTTGCTGGTTTTTTGGGGCAGTTCTGTTGATTTTTCTTTGTACAACATTAGTTATTATTACACCGTGAACCTTGCTTTTAATAGTTCATCTCTCTCTTTCATATTTCTACCAATGCATGGTGATAGCAGTGTTTTT

Coding sequence (CDS)

ATGGTTGTAGCCAACTTTCCAACTAAGAAGTATAATGATGATTACTTCTCGTCTATGAGAAATGCTCAATGCACAGTTTGCTTGGCAGATTATCATAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTCCACGTGAACTGCATAGACATATGGCTGCATCAGCACTCAACATGCCCGGTTTGTCGTCTATCGCTACGCGAGGTCCAAGACAAGAAACGAACAATGCAGCCCTTGTTTAGCTCAGCAATTCGCTCTCTCAACTCAGATCCCTGCCGCGGGTTCCCATTAAGAGACCTTGAAAACAATGGGTTGGAACAACCAATCCAAGAGAATCACTACACACCTGGGGCTAATGGAGCAGTGGATCCAATAGAGAACGCTTCCCCATTTATCGAAGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGA

Protein sequence

MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA

Homology

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BLAST of IVF0021125 vs. ExPASy Swiss-Prot
Match: Q9SN28 (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 7   PTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPVCR 66
           P   Y + +   ++++QC+VCL DY +E+ L+ +P CGH+FH+ CID+WL  H+TCP+CR
Sbjct: 96  PVVIYKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCR 155

Query: 67  LSL 70
           LSL
Sbjct: 156 LSL 156

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BLAST of IVF0021125 vs. ExPASy Swiss-Prot
Match: Q9SN27 (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-14
Identity = 29/52 (55.77%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 18  SMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPVCRLSL 70
           ++ + QC+VCL DY +E+ L+ +P CGH+FH+ CID+WL  H+TCP+CRLSL
Sbjct: 91  TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 142

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BLAST of IVF0021125 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-13
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHST 61
           V+ + P   ++ +   S + A+C +CLA++ + D LR+LP CGH FHV CID WL  HS+
Sbjct: 89  VLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSS 148

Query: 62  CPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDP 95
           CP CR  L   +  K    P  SS+   L S+P
Sbjct: 149 CPSCRQILVVARCHKCGGLPGSSSS--GLESEP 179

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BLAST of IVF0021125 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-13
Identity = 31/93 (33.33%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHST 61
           V+ + P   ++D+  +     +C VCL+++   +  R+LP C H+FHV+CID+W H HST
Sbjct: 99  VIKSLPVFTFSDE--THKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHST 158

Query: 62  CPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDP 95
           CP+CR  +  +   + T        + +++SDP
Sbjct: 159 CPLCRSLVESLAGIESTAAAREREVVIAVDSDP 189

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BLAST of IVF0021125 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-13
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNA--QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQH 61
           VV  FPT  Y+D     +     +C +CL ++  ++ LR+LP C H FH +CID WL  H
Sbjct: 104 VVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAH 163

Query: 62  STCPVCRLSLREVQDKKRTMQP 82
            TCPVCR +L E   +  +++P
Sbjct: 164 VTCPVCRANLAEQVAEGESVEP 185

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BLAST of IVF0021125 vs. ExPASy TrEMBL
Match: A0A5D3CKS4 (RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00660 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 60
           MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS
Sbjct: 64  MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 123

Query: 61  TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 120
           TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG
Sbjct: 124 TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 183

Query: 121 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 156
           ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 184 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

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BLAST of IVF0021125 vs. ExPASy TrEMBL
Match: A0A1S3C364 (RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 60
           MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS
Sbjct: 64  MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 123

Query: 61  TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 120
           TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG
Sbjct: 124 TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 183

Query: 121 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 156
           ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 184 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

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BLAST of IVF0021125 vs. ExPASy TrEMBL
Match: A0A0A0KB30 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.3e-84
Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 60
           MVVANFPTKKY+DDYFSSM+NAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS
Sbjct: 64  MVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 123

Query: 61  TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 120
           TCPVCRLSLREVQDKKRTMQPLFSSAIR+LNSDPCRGFPLRDLENNGLEQPIQENHYT G
Sbjct: 124 TCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHYTTG 183

Query: 121 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 156
            NGA DPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 184 TNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 218

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BLAST of IVF0021125 vs. ExPASy TrEMBL
Match: A0A6J1JQ55 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111487309 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 132/161 (81.99%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHST 61
           VVANFPTKKY+D+YFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHV CIDIWLH+HST
Sbjct: 65  VVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLHRHST 124

Query: 62  CPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQPIQE 121
           CPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE PIQE
Sbjct: 125 CPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQE 184

Query: 122 NHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 156
           N     ANGA DPIENAS F EGN NSKG RNKNVESPSNA
Sbjct: 185 NQ----ANGAADPIENASSFTEGNLNSKGSRNKNVESPSNA 220

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BLAST of IVF0021125 vs. ExPASy TrEMBL
Match: A0A6J1H8I0 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111461516 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.9e-64
Identity = 130/161 (80.75%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHST 61
           VVANFPTKKY+D+YFSSMRNAQCTVCLADY+SEDLLRILPYCGHSFHV CIDIWLH+HST
Sbjct: 65  VVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHST 124

Query: 62  CPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQPIQE 121
           CPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE PIQE
Sbjct: 125 CPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQE 184

Query: 122 NHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 156
           N     ANGA DPIENAS F EGN NSKG RNKNV SPSNA
Sbjct: 185 NQ----ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

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BLAST of IVF0021125 vs. NCBI nr
Match: XP_008456580.1 (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo] >TYK11748.1 RING-H2 finger protein ATL8-like [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (847), Expect = 1.52e-113
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 60
           MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS
Sbjct: 64  MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 123

Query: 61  TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 120
           TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG
Sbjct: 124 TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 183

Query: 121 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 155
           ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 184 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of IVF0021125 vs. NCBI nr
Match: XP_004140896.1 (RING-H2 finger protein ATL8 [Cucumis sativus] >KGN46024.1 hypothetical protein Csa_004876 [Cucumis sativus])

HSP 1 Score: 320 bits (819), Expect = 2.81e-109
Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 60
           MVVANFPTKKY+DDYFSSM+NAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS
Sbjct: 64  MVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 123

Query: 61  TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 120
           TCPVCRLSLREVQDKKRTMQPLFSSAIR+LNSDPCRGFPLRDLENNGLEQPIQENHYT G
Sbjct: 124 TCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHYTTG 183

Query: 121 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 155
            NGA DPIENASPFIEGNQNSKGCRNKNVESPSNA
Sbjct: 184 TNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of IVF0021125 vs. NCBI nr
Match: XP_038886584.1 (RING-H2 finger protein ATL74-like [Benincasa hispida])

HSP 1 Score: 306 bits (785), Expect = 4.26e-104
Identity = 144/155 (92.90%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHS 60
           MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILP+CGHSFHV CIDIWLHQHS
Sbjct: 64  MVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLHQHS 123

Query: 61  TCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHYTPG 120
           TCPVCRLSLREV DKKRTMQPLFSSAIRSL+SDPCRGFPLRDL+N+GLEQPIQENH T G
Sbjct: 124 TCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDPCRGFPLRDLQNSGLEQPIQENHCTSG 183

Query: 121 ANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 155
           ANGA DPIENA+ FIEGNQNSKGCRNKNVESPSNA
Sbjct: 184 ANGAADPIENAASFIEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of IVF0021125 vs. NCBI nr
Match: XP_022990455.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima])

HSP 1 Score: 257 bits (657), Expect = 1.41e-84
Identity = 132/161 (81.99%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHST 61
           VVANFPTKKY+D+YFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHV CIDIWLH+HST
Sbjct: 65  VVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLHRHST 124

Query: 62  CPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQPIQE 121
           CPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE PIQE
Sbjct: 125 CPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQE 184

Query: 122 NHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 155
           N     ANGA DPIENAS F EGN NSKG RNKNVESPSNA
Sbjct: 185 NQ----ANGAADPIENASSFTEGNLNSKGSRNKNVESPSNA 220

[Close]

BLAST of IVF0021125 vs. NCBI nr
Match: XP_023524777.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254 bits (650), Expect = 1.64e-83
Identity = 131/161 (81.37%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHST 61
           VVANFPTKKY+D+YFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHV CIDIWLH+HST
Sbjct: 65  VVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLHRHST 124

Query: 62  CPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQPIQE 121
           CPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE PIQE
Sbjct: 125 CPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQE 184

Query: 122 NHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 155
           N     ANGA DPIENAS F EGN NSKG RNKNV SPSNA
Sbjct: 185 NQ----ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

[Close]

BLAST of IVF0021125 vs. TAIR 10
Match: AT4G10150.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 7   PTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPVCR 66
           P   Y + +   ++++QC+VCL DY +E+ L+ +P CGH+FH+ CID+WL  H+TCP+CR
Sbjct: 96  PVVIYKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCR 155

Query: 67  LSL 70
           LSL
Sbjct: 156 LSL 156

[Close]

BLAST of IVF0021125 vs. TAIR 10
Match: AT4G10160.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.3e-15
Identity = 29/52 (55.77%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 18  SMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPVCRLSL 70
           ++ + QC+VCL DY +E+ L+ +P CGH+FH+ CID+WL  H+TCP+CRLSL
Sbjct: 91  TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 142

[Close]

BLAST of IVF0021125 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHST 61
           V+ + P   ++ +   S + A+C +CLA++ + D LR+LP CGH FHV CID WL  HS+
Sbjct: 89  VLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSS 148

Query: 62  CPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDP 95
           CP CR  L   +  K    P  SS+   L S+P
Sbjct: 149 CPSCRQILVVARCHKCGGLPGSSSS--GLESEP 179

[Close]

BLAST of IVF0021125 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14
Identity = 31/93 (33.33%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHST 61
           V+ + P   ++D+  +     +C VCL+++   +  R+LP C H+FHV+CID+W H HST
Sbjct: 99  VIKSLPVFTFSDE--THKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHST 158

Query: 62  CPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDP 95
           CP+CR  +  +   + T        + +++SDP
Sbjct: 159 CPLCRSLVESLAGIESTAAAREREVVIAVDSDP 189

[Close]

BLAST of IVF0021125 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 2   VVANFPTKKYNDDYFSSMRNA--QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQH 61
           VV  FPT  Y+D     +     +C +CL ++  ++ LR+LP C H FH +CID WL  H
Sbjct: 104 VVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAH 163

Query: 62  STCPVCRLSLREVQDKKRTMQP 82
            TCPVCR +L E   +  +++P
Sbjct: 164 VTCPVCRANLAEQVAEGESVEP 185

The following BLAST results are available for this feature:

BLAST of IVF0021125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN28	1.4e-14	49.21	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]
Q9SN27	3.2e-14	55.77	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]
Q9LM69	2.7e-13	40.86	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
Q8L9T5	3.5e-13	33.33	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q8RXX9	3.5e-13	40.24	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]

BLAST of IVF0021125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKS4	1.3e-87	100.00	RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C364	1.3e-87	100.00	RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV...	[more]
A0A0A0KB30	2.3e-84	96.13	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 P...	[more]
A0A6J1JQ55	1.4e-65	81.99	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111487309 PE...	[more]
A0A6J1H8I0	5.9e-64	80.75	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111461516 ...	[more]

BLAST of IVF0021125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456580.1	1.52e-113	100.00	PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo] >TYK11748.1 RING-H2 f...	[more]
XP_004140896.1	2.81e-109	96.13	RING-H2 finger protein ATL8 [Cucumis sativus] >KGN46024.1 hypothetical protein C...	[more]
XP_038886584.1	4.26e-104	92.90	RING-H2 finger protein ATL74-like [Benincasa hispida]	[more]
XP_022990455.1	1.41e-84	81.99	RING-H2 finger protein ATL74-like [Cucurbita maxima]	[more]
XP_023524777.1	1.64e-83	81.37	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0021125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10150.1	1.0e-15	49.21	RING/U-box superfamily protein	[more]
AT4G10160.1	2.3e-15	55.77	RING/U-box superfamily protein	[more]
AT1G20823.1	1.9e-14	40.86	RING/U-box superfamily protein	[more]
AT3G16720.1	2.5e-14	33.33	TOXICOS EN LEVADURA 2	[more]
AT3G05200.1	2.5e-14	40.24	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 24..65 e-value: 9.5E-7 score: 38.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 23..66 e-value: 6.9E-13 score: 48.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 24..66 score: 12.459772
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..76 e-value: 1.3E-20 score: 74.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..155
None	No IPR available	PANTHER	PTHR47035	OS11G0150450 PROTEIN	coord: 1..154
None	No IPR available	PANTHER	PTHR47035:SF3	OS11G0150450 PROTEIN	coord: 1..154
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 23..66 e-value: 1.74158E-17 score: 69.2529
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 23..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0021125.2	IVF0021125.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane