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IVF0021120 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCCACAACCAAGAGGATCATCTTCATCTTCAAAGCGGCGCAGTAGAGGTGGTCGTCATCTTCATCTTCAATACAACACAATAGAGGCGTTGTCATCTTCATCTTCAATGCGATGCAACAAAGTCGGTCGTCATCTTCATCTTCAATCGGATGCAACAGAGGCGGTCGTCATCTTTATCTTTCAATATGGTGTAGCAAAAGCGATCGTCATCTTCATCTTCAATGCGGCACAGCAGAGGCGGTCTTCATCTTCATTTTTAATGCTGTGTAGCAGAGGTGGTCGTCTTCTTCATCTTCAATGCAACACAGTAGAGACGATTATCATCTTCATCTTCAACACGGTTGCAACCGATAGGATCATCATCTTCATCTTTAATGTCGCGCAACCATGA ATGTTGCCACAACCAAGAGGATCATCTTCATCTTCAAAGCGGCGCAGTAGAGGTGGTCGTCATCTTCATCTTCAATACAACACAATAGAGGCGTTGTCATCTTCATCTTCAATGCGATGCAACAAAGTCGGTCGTCATCTTCATCTTCAATCGGATGCAACAGAGGCGGTCGTCATCTTTATCTTTCAATATGGTGTAGCAAAAGCGATCGTCATCTTCATCTTCAATGCGGCACAGCAGAGGCGGTCTTCATCTTCATTTTTAATGCTGTGTAGCAGAGGTGGTCGTCTTCTTCATCTTCAATGCAACACAGTAGAGACGATTATCATCTTCATCTTCAACACGGTTGCAACCGATAGGATCATCATCTTCATCTTTAATGTCGCGCAACCATGA ATGTTGCCACAACCAAGAGGATCATCTTCATCTTCAAAGCGGCGCAGTAGAGGTGGTCGTCATCTTCATCTTCAATACAACACAATAGAGGCGTTGTCATCTTCATCTTCAATGCGATGCAACAAAGTCGGTCGTCATCTTCATCTTCAATCGGATGCAACAGAGGCGGTCGTCATCTTTATCTTTCAATATGGTGTAGCAAAAGCGATCGTCATCTTCATCTTCAATGCGGCACAGCAGAGGCGGTCTTCATCTTCATTTTTAATGCTGTGTAGCAGAGGTGGTCGTCTTCTTCATCTTCAATGCAACACAGTAGAGACGATTATCATCTTCATCTTCAACACGGTTGCAACCGATAGGATCATCATCTTCATCTTTAATGTCGCGCAACCATGA MLPQPRGSSSSSKRRSRGGRHLHLQYNTIEALSSSSSMRCNKVGRHLHLQSDATEAVVIFIFQYGVAKAIVIFIFNAAQQRRSSSSFLMLCSRGGRLLHLQCNTVETIIIFIFNTVATDRIIIFIFNVAQP Homology
BLAST of IVF0021120 vs. ExPASy TrEMBL
Match: A0A5A7U1J1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001320 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 6.8e-13 Identity = 65/147 (44.22%), Postives = 77/147 (52.38%), Query Frame = 0
BLAST of IVF0021120 vs. ExPASy TrEMBL
Match: A0A5D3DRX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00420 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 3.5e-09 Identity = 49/92 (53.26%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of IVF0021120 vs. ExPASy TrEMBL
Match: A0A5A7SRV7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00800 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 3.5e-09 Identity = 52/143 (36.36%), Postives = 68/143 (47.55%), Query Frame = 0
BLAST of IVF0021120 vs. ExPASy TrEMBL
Match: A0A5D3DCM3 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00330 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.3e-07 Identity = 55/132 (41.67%), Postives = 63/132 (47.73%), Query Frame = 0
BLAST of IVF0021120 vs. ExPASy TrEMBL
Match: A0A5A7UZ51 (Retrotransposon protein putative ty3-gypsy sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001080 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of IVF0021120 vs. NCBI nr
Match: KAA0047505.1 (hypothetical protein E6C27_scaffold498G001320 [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 1.02e-16 Identity = 65/147 (44.22%), Postives = 77/147 (52.38%), Query Frame = 0
BLAST of IVF0021120 vs. NCBI nr
Match: KAA0033278.1 (hypothetical protein E6C27_scaffold845G00800 [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 3.06e-12 Identity = 41/88 (46.59%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of IVF0021120 vs. NCBI nr
Match: TYK26477.1 (hypothetical protein E5676_scaffold313G00420 [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 9.82e-12 Identity = 49/92 (53.26%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of IVF0021120 vs. NCBI nr
Match: TYK21322.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 8.83e-10 Identity = 54/132 (40.91%), Postives = 63/132 (47.73%), Query Frame = 0
BLAST of IVF0021120 vs. NCBI nr
Match: KAA0060324.1 (retrotransposon protein putative ty3-gypsy sub-class [Cucumis melo var. makuwa]) HSP 1 Score: 63.5 bits (153), Expect = 6.19e-09 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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