IVF0021046 (gene) Melon (IVF77) v1

Overview
NameIVF0021046
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 16764691 .. 16764882 (-)
RNA-Seq ExpressionIVF0021046
SyntenyIVF0021046
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCGGACTCGGGCGGCTGGCGGCGCGGGTCAGCAGATTTGTTCGACCGACTAGCAGAGACGTCCGACGTGGTGACTGGCTGAAGGCGACTCTCGGCGATGGCTTGCAGATGGGGTTTCAGCTTAAGATTGCGGCTGGGCCTCCGGCGGCGATGGCGGCGGCGCGGCGAGCTGGGGTCGGCGGCTAG

mRNA sequence

ATGGCTTCCGGACTCGGGCGGCTGGCGGCGCGGGTCAGCAGATTTGTTCGACCGACTAGCAGAGACGTCCGACGTGGTGACTGGCTGAAGGCGACTCTCGGCGATGGCTTGCAGATGGGGTTTCAGCTTAAGATTGCGGCTGGGCCTCCGGCGGCGATGGCGGCGGCGCGGCGAGCTGGGGTCGGCGGCTAG

Coding sequence (CDS)

ATGGCTTCCGGACTCGGGCGGCTGGCGGCGCGGGTCAGCAGATTTGTTCGACCGACTAGCAGAGACGTCCGACGTGGTGACTGGCTGAAGGCGACTCTCGGCGATGGCTTGCAGATGGGGTTTCAGCTTAAGATTGCGGCTGGGCCTCCGGCGGCGATGGCGGCGGCGCGGCGAGCTGGGGTCGGCGGCTAG

Protein sequence

MASGLGRLAARVSRFVRPTSRDVRRGDWLKATLGDGLQMGFQLKIAAGPPAAMAAARRAGVGG
Homology
[Close]
BLAST of IVF0021046 vs. ExPASy TrEMBL
Match: A0A5A7UEB5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00210 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-09
Identity = 40/60 (66.67%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 2   ASGLGRLAARVSRFVRPTSRDVRRGDWLKATLGDGLQMGFQLKIAAGPPAAMAAARRAGV 61
           ASGLGRLA +V R VR TSRDVRRG WLKA LGDGLQMGF+L    G  +A A A   GV
Sbjct: 86  ASGLGRLAVQVGRSVRLTSRDVRRGVWLKAALGDGLQMGFRLARREGFRSAKATACGRGV 145

[Close]
BLAST of IVF0021046 vs. NCBI nr
Match: KAA0052055.1 (hypothetical protein E6C27_scaffold578G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 4.48e-12
Identity = 40/60 (66.67%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 2   ASGLGRLAARVSRFVRPTSRDVRRGDWLKATLGDGLQMGFQLKIAAGPPAAMAAARRAGV 61
           ASGLGRLA +V R VR TSRDVRRG WLKA LGDGLQMGF+L    G  +A A A   GV
Sbjct: 86  ASGLGRLAVQVGRSVRLTSRDVRRGVWLKAALGDGLQMGFRLARREGFRSAKATACGRGV 145

The following BLAST results are available for this feature:
BLAST of IVF0021046 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0021046 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UEB54.9e-0966.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of IVF0021046 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052055.14.48e-1266.67hypothetical protein E6C27_scaffold578G00210 [Cucumis melo var. makuwa][more]
BLAST of IVF0021046 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021046.1IVF0021046.1mRNA