IVF0021019 (gene) Melon (IVF77) v1

Overview
NameIVF0021019
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 2957973 .. 2958384 (-)
RNA-Seq ExpressionIVF0021019
SyntenyIVF0021019
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACGGGAAAGCCAAAATAGGGATTTGGATTATAGTGATGTTCATGAACAGCTAATGTCAATTGCCACCTTCGACTCGGTGCTTCTTGCTTCGACAACTCTCTATTGTGTTTCAAAGAGACCCTAATAACAATAATTTGGAAGAAGAGGTTCAATCAAATGGACTTACGCTCTGTTCTACATTCAAATGTATAATACAATCCCGAGTCCAAGCTGAATTCTTGCAATCTCTTCGTTTGATATACAAATGCCCCCAGTTCCCCCTTAAAACACTCGATCCACAAAACAAAGTATGTTTATCCCCTCGCCAAACATCTGCACATGCCTGTGAAACTGGTCCATATATTCGAGTTTCTCCAAAGATTCCTATGGAAAAATTATGTAGCGCAAGTCATTTTTTGTTGAGCTAA

mRNA sequence

ATGAAACGGGAAAGCCAAAATAGGGATTTGGATTATAGTGATGTTCATGAACAGCTAATGTCAATTGCCACCTTCGACTCGGTGCTTCTTGCTTCGACAACTCTCTATTGTGTTCAATCAAATGGACTTACGCTCTGTTCTACATTCAAATGTATAATACAATCCCGAGTCCAAGCTGAATTCTTGCAATCTCTTCGTTTGATATACAAATGCCCCCAGTTCCCCCTTAAAACACTCGATCCACAAAACAAAGTATGTTTATCCCCTCGCCAAACATCTGCACATGCCTGTGAAACTGGTCCATATATTCGAGTTTCTCCAAAGATTCCTATGGAAAAATTATGTAGCGCAAGTCATTTTTTGTTGAGCTAA

Coding sequence (CDS)

ATGAAACGGGAAAGCCAAAATAGGGATTTGGATTATAGTGATGTTCATGAACAGCTAATGTCAATTGCCACCTTCGACTCGGTGCTTCTTGCTTCGACAACTCTCTATTGTGTTCAATCAAATGGACTTACGCTCTGTTCTACATTCAAATGTATAATACAATCCCGAGTCCAAGCTGAATTCTTGCAATCTCTTCGTTTGATATACAAATGCCCCCAGTTCCCCCTTAAAACACTCGATCCACAAAACAAAGTATGTTTATCCCCTCGCCAAACATCTGCACATGCCTGTGAAACTGGTCCATATATTCGAGTTTCTCCAAAGATTCCTATGGAAAAATTATGTAGCGCAAGTCATTTTTTGTTGAGCTAA

Protein sequence

MKRESQNRDLDYSDVHEQLMSIATFDSVLLASTTLYCVQSNGLTLCSTFKCIIQSRVQAEFLQSLRLIYKCPQFPLKTLDPQNKVCLSPRQTSAHACETGPYIRVSPKIPMEKLCSASHFLLS
Homology
[Close]
BLAST of IVF0021019 vs. ExPASy TrEMBL
Match: A0A0A0LHC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878920 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.0e-42
Identity = 100/128 (78.12%), Postives = 103/128 (80.47%), Query Frame = 0 

Query: 9   DLDYSDVHEQLMSIATFDSVLLASTTLYC-------------VQSNGLTLCSTFKCIIQS 68
           DLDY DVHEQLMSIATFDSV LASTTLYC             V+SNGL  CSTFKCIIQS
Sbjct: 2   DLDYIDVHEQLMSIATFDSV-LASTTLYCVSTRPNNNNLEEEVKSNGLAFCSTFKCIIQS 61

Query: 69  RVQAEFLQSLRLIYKCPQFPLKTLDPQNKVCLSPRQTSAHACETGPYIRVSPKIPMEKLC 124
           +VQ EFLQSL  IYKC   PLKTL+PQNKVCLSPRQTSAHACETGPYIRVSPKI MEKLC
Sbjct: 62  QVQNEFLQSLHSIYKC---PLKTLNPQNKVCLSPRQTSAHACETGPYIRVSPKILMEKLC 121

[Close]
BLAST of IVF0021019 vs. NCBI nr
Match: KGN60122.1 (hypothetical protein Csa_000931 [Cucumis sativus])

HSP 1 Score: 182 bits (462), Expect = 8.45e-57
Identity = 100/128 (78.12%), Postives = 103/128 (80.47%), Query Frame = 0 

Query: 9   DLDYSDVHEQLMSIATFDSVLLASTTLYCV-------------QSNGLTLCSTFKCIIQS 68
           DLDY DVHEQLMSIATFDSVL ASTTLYCV             +SNGL  CSTFKCIIQS
Sbjct: 2   DLDYIDVHEQLMSIATFDSVL-ASTTLYCVSTRPNNNNLEEEVKSNGLAFCSTFKCIIQS 61

Query: 69  RVQAEFLQSLRLIYKCPQFPLKTLDPQNKVCLSPRQTSAHACETGPYIRVSPKIPMEKLC 123
           +VQ EFLQSL  IYKCP   LKTL+PQNKVCLSPRQTSAHACETGPYIRVSPKI MEKLC
Sbjct: 62  QVQNEFLQSLHSIYKCP---LKTLNPQNKVCLSPRQTSAHACETGPYIRVSPKILMEKLC 121

The following BLAST results are available for this feature:
BLAST of IVF0021019 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0021019 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHC11.0e-4278.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878920 PE=4 SV=1[more]
BLAST of IVF0021019 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60122.18.45e-5778.13hypothetical protein Csa_000931 [Cucumis sativus][more]
BLAST of IVF0021019 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0021019.1IVF0021019.1mRNA