IVF0020901 (gene) Melon (IVF77) v1

Overview


Name	IVF0020901
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag/pol protein
Location	chr01: 23208203 .. 23214537 (-)
RNA-Seq Expression	IVF0020901
Synteny	IVF0020901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTATCATCATCTGGGTATATCATCCTTCGGCGAAGAAGGGAGATTCCAGCAGGCAGCGGCGTATGGTCAGGCCGGGCGAAGCAAGAACAAAGTTATGTTTATTAAAATAGAAATTGTAGAATTATATACTACTTTTTGGGAGGCAATATTTGTCTTTTCTAGAGCAGCTTTAACCTTATACTTGGTATTTGACAATCAATCATTCAAACTATCTTCAAGTTAGGCAATTGGTAATAAAAAATTACTAATCTTACGTGCATCGGTATTTGACCTACTAATTGGTAATAACTCATTTAGCTTTTAATTTTGTTTGTGAATTTTGCAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAAATCAAAAGGAGTTGGAAGAGAATGAAGTTGCTAGAAAGAGGTTTAAAAAAAATTAAGGGAAATTTCATATAAACCAGCCTGCCAAATCTACTTTCTCAAGTCAGGATGATGCCATTAAAAAATTTTAGGGTTTTATTTCTTTATCAAATAGAAACCATTCTTCAGGGGTAATTTATTAGAATAGCTCATTCGTTTTAGTATAGGAAAATTATCACAAATTCATTTTAGTTTTAGTTTGGGAAATATTTTAGCCCTTTTGTTTGATGAAAAAATTGGCATGGATTTGCTCCATGGTTTCTAGGTCTCTGTTCTTGTCATTCTTTTCCCCCTTATAGACATGAATGCTTGCAAGATGGGAACCCATTTTTTTTTTTGTTAATTTCACACGGAGGATGTTCTAAAATGAATAGTTACAAGCAAAAGAGTGCAACTAATCGATAATAGACACATAAATTTTCATAGATCACTAATACTACGTTAGCTACGTTATTGGTTAGAAAGAGAAAATGGTCTGAGGTTATTGAGGTTATTGAGGATATAGTTTATAAGATAAGCTAGAAATCTAACATTTTTTTTATTGACTTGAATCCACCAGATCAATAATGTGCTAGAGCTTTGTACATAAACTGTTTTTGATACTTAGGCATACCAAATTTATTCATAGTAGTGTTTATTTATTTATTTATTATTATTATAGGATGTGAAGATTGAACTTATAAATACCTCATACCATACATATTTGATGGTACAATTGAGTTTTGATGATTTAAATTTACATAATTTTGAGTTGTATATATTATGTTTATAATCATATATATGTGTTTTTTGTGTGCACCAAATGATAATAAAAACAATAAAATTGACAAGTTTTTAAAAAGAATCAAATTCCTCAACAGAAATCAATAATAATACAGAGAAAATAAACAACATATAGGATAAAAGTACATATATAAGCATGCTATTACAGAGAAGGTATTTGAAGTACATATATAAGCATGCTATTACTTAATAAGTATGTTTATTAAGTCGTCAACCTTCAATTTTGTAGAAATTTTTATTTTTATCCTGAGAGTTGTTAGCAATATTTCCTTGTCATATTCTAAATTCTCAATTTGTTTTTCATGTAGATAAAAAATCAGTGCCTGAGTAAAGTAGGCTCTGGAAAGGATGTGCGCCACTTCGAATTTGAATTTGTTTCTTTGGTAAGTTGGTAATTTCCACTTTTTGGTCATTCATTATTATTATCTTTTTTTTTTTTTGCTGTTTTCATAATATGTTACAATGACTGCATTTTGAACTAATTTTAAGTAATAGAATATGAAGTTGGTGATGTCCTTGAGGTTCTTCCTAGTCAGAGCTCAGCTGCAGTAAATGCTTTCATACTGTAGTTATGTTGTTCAAATCAGATTCTTGTTTTTGATGGCTCTATTATAATAATTGTTGTTTAGCCATAAGAACAACCAAGAGATATATTATTCTCTTATCTGTGTAATCAAGCAAATCACAAGCACCAAATAATATGTTGGAAATTGATGGTACAAGTTTAACATTCAGTCAACTGTTTGGAATTGAAGGTATTATACAAAAAAGTTTATCTTACCATGTTTCTCAATTTGTTTTTTAGGAAGACTTGAATGAACAAGTTATAATTTATTTGTCTATTATATATTATAGCATGAAATGATTTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTTCAAGTACAAGTCAAAACGTTTGAATAATTATAAAAAGAATAATCAGTTTGATTGATGTTGTACTATTATTGATGAGTTATTTTTCTTCATTTTGATCTTGTTGTACTATCATTGTGCTGAAAGTTTGATTGATGTTGTAATCCCACAAACTCTTTTCGAATGTGATCATATCTTTACCTCTGATTTGTGGTTCTATTTTATAGTTACGATATGCTTTCCAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACATTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGACTGTCCTCAAGTCCCAGCTGCCAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTAGCAGTAATGAATGAGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCTGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCTTTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAAAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACAATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTATTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAGACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGATACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCATTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATCTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCATAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAATAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCATTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCCAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGATTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAAGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTAAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

mRNA sequence

ATGCGGTATCATCATCTGGGTATATCATCCTTCGGCGAAGAAGGGAGATTCCAGCAGGCAGCGGCGTATGGTCAGGCCGGGCGAAGCAAGAACAAAGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAAATCAAAAGGAGTTGGAAGAGAATGAAGTTGCTAGAAAGAGAAACCATTCTTCAGGGGATGTGAAGATTGAACTTATAAATACCTCATACCATACATATTTGATGATAAAAAATCAGTGCCTGAGTAAAGTAGGCTCTGGAAAGGATGTGCGCCACTTCGAATTTGAATTTGTTTCTTTGGTAAGTTGTTACGATATGCTTTCCAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACATTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGACTGTCCTCAAGTCCCAGCTGCCAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTAGCAGTAATGAATGAGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCTGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCTTTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAAAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACAATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTATTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAGACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGATACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCATTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATCTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCATAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAATAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCATTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCCAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGATTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAAGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTAAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Coding sequence (CDS)

ATGCGGTATCATCATCTGGGTATATCATCCTTCGGCGAAGAAGGGAGATTCCAGCAGGCAGCGGCGTATGGTCAGGCCGGGCGAAGCAAGAACAAAGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAAATCAAAAGGAGTTGGAAGAGAATGAAGTTGCTAGAAAGAGAAACCATTCTTCAGGGGATGTGAAGATTGAACTTATAAATACCTCATACCATACATATTTGATGATAAAAAATCAGTGCCTGAGTAAAGTAGGCTCTGGAAAGGATGTGCGCCACTTCGAATTTGAATTTGTTTCTTTGGTAAGTTGTTACGATATGCTTTCCAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACATTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGACTGTCCTCAAGTCCCAGCTGCCAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTAGCAGTAATGAATGAGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCTGGAACTAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAGCCAAAGCTGCAAAGGGAATATGTTTCCTTTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAAAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACAATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTATTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCACATAAATCTCAATAGGATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAGACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGATACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCATTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATCTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCATAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAATAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCATTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCCAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGATTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAAGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTAAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Protein sequence

MRYHHLGISSFGEEGRFQQAAAYGQAGRSKNKAKLRSPSWWKRYLNQKELEENEVARKRNHSSGDVKIELINTSYHTYLMIKNQCLSKVGSGKDVRHFEFEFVSLVSCYDMLSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQPDICYAVGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFKGHLESLGLRDMPHLT

Homology

[Close]

BLAST of IVF0020901 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 5.4e-201
Identity = 460/1378 (33.38%), Postives = 711/1378 (51.60%), Query Frame = 0


Query: 124  KLNGNN-YASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYERWAKANEKARA 183
            K NG+N +++W+  +  +LI   L  VL  D  +     A        E WA  +E+A +
Sbjct: 10   KFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKA--------EDWADLDERAAS 69

Query: 184  YILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREH 243
             I   LS+ +        TAR I   L+ ++   +   K    K +Y   M+EG +   H
Sbjct: 70   AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSH 129

Query: 244  VLNMMVHFNVAVMNEAV-IDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQ 303
             LN+       + N  V I+E  +   +L SLP S+    +  +  K    L  + + L 
Sbjct: 130  -LNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALL 189

Query: 304  TFESLMKIKGQKGEANVATST-RKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAA 363
              E + K    +G+A +     R + R S +  +S              G +G       
Sbjct: 190  LNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS--------------GARG------- 249

Query: 364  AKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYD-------------LLVL 423
             K+  ++K+    C+ CNQ GH+KR+CP     K +    K D             +L +
Sbjct: 250  -KSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFI 309

Query: 424  ---ETCL-VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVG 483
               E C+ +   +S W++D+ A++H          +   + G  T+++G         +G
Sbjct: 310  NEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFG--TVKMGNTSYSKIAGIG 369

Query: 484  GLRLCLQKSF---LLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICS 543
               +C++ +    L+L++V  VPDL+ NLIS   L    Y   F   K  + K  + I  
Sbjct: 370  D--ICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAK 429

Query: 544  AKLENNLYVLRSLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERL 603
                  LY   +   +  LN    + ++               LWH R+GH++   ++ L
Sbjct: 430  GVARGTLYRTNAEICQGELNAAQDEISV--------------DLWHKRMGHMSEKGLQIL 489

Query: 604  VKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGF 663
             K  L+S  +  ++  C+ CL GK  +  F     R    L+LV+SD+CGPM +++ GG 
Sbjct: 490  AKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGN 549

Query: 664  EYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKF 723
            +YF+TF DD SR  +VY+++ K +  + F+++ A VE    + +K  RSD GGEY   +F
Sbjct: 550  KYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREF 609

Query: 724  QNYLMECGIVSQLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYI 783
            + Y    GI  + + P TPQ NGV+ER NRT+++ VRSM+  A LP SFWG AVQTA Y+
Sbjct: 610  EEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYL 669

Query: 784  LNCVPSKSVS-ETPLKLWNGHKGSLRHFRIWGCP--AHVLENNPKKLEPRSKLCLFVGYP 843
            +N  PS  ++ E P ++W   + S  H +++GC   AHV +    KL+ +S  C+F+GY 
Sbjct: 670  INRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYG 729

Query: 844  KGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNEL---------------- 903
                G   +DP   KV  S +  F  E  +R     S+ V N +                
Sbjct: 730  DEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTS 789

Query: 904  SKETTEPSTRVVEEPSALI-----------RVVHVGSSTRTHQPQSLREPRRSGRVTNLP 963
            ++ TT+  +   E+P  +I            V H       HQP      RRS R     
Sbjct: 790  AESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL-----RRSERPRVES 849

Query: 964  IRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPD 1023
             RY S TE + +  D    +P + K+ +   +K++ +KAM  E+ES+  N  + LV+ P 
Sbjct: 850  RRYPS-TEYVLISDD---REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPK 909

Query: 1024 GVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSI 1083
            G +P+ CKW++K K+  D K+  +KARLV KG+ Q +G+D++E FSPV  + SIR +LS+
Sbjct: 910  GKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSL 969

Query: 1084 AAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSW 1143
            AA  D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++  +CKLN+S+YGLKQA R W
Sbjct: 970  AASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQW 1029

Query: 1144 NIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLA 1203
             ++FD+ +KS  + +   +PCVY KR    +   L+LYVDD+L++G D GL+  +K  L+
Sbjct: 1030 YMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLS 1089

Query: 1204 TQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVT 1263
              F MKDLG AQ +LG++I R+R ++ L LSQ  YI++++ +++M+N+K    P    + 
Sbjct: 1090 KSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLK 1149

Query: 1264 LSKE-------------------------------QPDICYAVGIVSRYQSNPGLAHWTA 1323
            LSK+                               +PDI +AVG+VSR+  NPG  HW A
Sbjct: 1150 LSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEA 1209

Query: 1324 IKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSDSVFTLNGGAVVWRSI 1383
            +K IL+YLR T    L +G  D IL GYTD+D   D D+RKS++  +FT +GGA+ W+S 
Sbjct: 1210 VKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSK 1269

Query: 1384 KQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREP 1417
             Q+C+A ST EAEY+AA E  KE +WL+ FL +L +     K   +YCD+  A+  S+  
Sbjct: 1270 LQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNS 1325

[Close]

BLAST of IVF0020901 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 506.9 bits (1304), Expect = 7.4e-142
Identity = 408/1444 (28.25%), Postives = 669/1444 (46.33%), Query Frame = 0


Query: 126  NGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYERWAKANEKARAYIL 185
            +G  YA WK  I  +L   D+  V+    P            E  + W KA   A++ I+
Sbjct: 12   DGEKYAIWKFRIRALLAEQDVLKVVDGLMP-----------NEVDDSWKKAERCAKSTII 71

Query: 186  ASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLN 245
              LS+       S +TAR+I+++L  ++ + S   +    K + + +++   S+  H   
Sbjct: 72   EYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHI 131

Query: 246  MMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFES 305
                 +  +   A I+E  ++S +L +LP  +      A+       LT    + +  + 
Sbjct: 132  FDELISELLAAGAKIEEMDKISHLLITLPSCY-DGIITAIETLSEENLTLAFVKNRLLDQ 191

Query: 306  LMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTK 365
             +KIK    + +        H  + +   ++     N+  K KK  +GN        +  
Sbjct: 192  EIKIKNDHNDTSKKVMNAIVHNNNNTYKNNL---FKNRVTKPKKIFKGN--------SKY 251

Query: 366  KAKAAKGICFLCNQEGHWKRNCPKY---LAKKKKAKQGKYDL-----LVLETCLVEN--- 425
            K K     C  C +EGH K++C  Y   L  K K  + +        +      V N   
Sbjct: 252  KVK-----CHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTSV 311

Query: 426  -DDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSF 485
             D+  +++DSGA++H+ +     +   ++           G  + A   G +RL      
Sbjct: 312  MDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRL-RNDHE 371

Query: 486  LLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEIC-SAKLENNLYVLRS 545
            + LE+V    +   NL+SVK L E   S+ F+ + V I KNG+ +  ++ + NN+ V+  
Sbjct: 372  ITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPVIN- 431

Query: 546  LTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELE-- 605
                             Q   +    K N  LWH R GHI+  ++  + +  + S+    
Sbjct: 432  ----------------FQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLL 491

Query: 606  ---ENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFI 665
               E S  +CE CL GK  + PF     K H  K PL +VHSD+CGP+         YF+
Sbjct: 492  NNLELSCEICEPCLNGKQARLPFKQLKDKTH-IKRPLFVVHSDVCGPITPVTLDDKNYFV 551

Query: 666  TFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYL 725
             F D ++ Y   YL+++KS+    F+++ A+ E   +  +     D G EY+  + + + 
Sbjct: 552  IFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFC 611

Query: 726  MECGIVSQLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCV 785
            ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A L  SFWG AV TA Y++N +
Sbjct: 612  VKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRI 671

Query: 786  PSKSV---SETPLKLWNGHKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG 845
            PS+++   S+TP ++W+  K  L+H R++G   +V ++N   K + +S   +FVGY P G
Sbjct: 672  PSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPNG 731

Query: 846  --------------------------TRGGYFYD--------------PKDNKVFVST-- 905
                                      +R   F                P D++  + T  
Sbjct: 732  FKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEF 791

Query: 906  --------NATFLEEDHIREHK----PRSKIVLNELS------------KETTEPSTRVV 965
                    N  FL++    E+K       KI+  E              K++ E +   +
Sbjct: 792  PNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFL 851

Query: 966  EEPSALIRVVHVGSSTRTHQPQSLREP------------------------RRSGRVTNL 1025
             E     R  H+  S  +  P   RE                         RRS R+   
Sbjct: 852  NESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTK 911

Query: 1026 P-IRYMSLTETL--TVISDGDI--EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 1085
            P I Y     +L   V++   I  + P +F +     DK  W +A+N EL +   N+ W 
Sbjct: 912  PQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWT 971

Query: 1086 LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 1145
            +  +P+    +  +W++  K    G    +KARLVA+G+TQ   +DYEETF+PVA + S 
Sbjct: 972  ITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSF 1031

Query: 1146 RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 1205
            R +LS+   ++ ++ QMDVKTAFLNG L+E IYM+ P+G  I      +CKLN++IYGLK
Sbjct: 1032 RFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLK 1091

Query: 1206 QASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGNDIGLL 1265
            QA+R W   F+ A+K   F     + C+Y   K  IN+++ +++LYVDD+++   D+  +
Sbjct: 1092 QAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRM 1151

Query: 1266 TDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGL 1325
             + K++L  +F+M DL E +  +GI+I  + +   + LSQ++Y+ KI+ K++M+N     
Sbjct: 1152 NNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVS 1211

Query: 1326 LPFRHGVT---LSKEQ---------------------PDICYAVGIVSRYQSNPGLAHWT 1385
             P    +    L+ ++                     PD+  AV I+SRY S      W 
Sbjct: 1212 TPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQ 1271

Query: 1386 AIKTILKYLRRTRDYTLVYGSKDLI----LTGYTDSDFQTDRDSRKSTSDSVFTL-NGGA 1417
             +K +L+YL+ T D  L++  K+L     + GY DSD+      RKST+  +F + +   
Sbjct: 1272 NLKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNL 1331

[Close]

BLAST of IVF0020901 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 2.2e-130
Identity = 387/1487 (26.03%), Postives = 641/1487 (43.11%), Query Frame = 0


Query: 113  SSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPA---ANATRTVREP 172
            S   +NM    KL   NY  W   ++ +    +L   L       PA    +A   V   
Sbjct: 14   SILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPD 73

Query: 173  YERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASY----QIKHDAL 232
            Y RW + ++   + +L ++S  +        TA +I ++L++++   SY    Q++    
Sbjct: 74   YTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLK 133

Query: 233  KYIYNARMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAV 292
            ++    +     ++ +++  ++  F+   +    +D   QV  +LE+LPE +        
Sbjct: 134  QWTKGTK-----TIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIA 193

Query: 293  MNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKW 352
                  TLT +   L   ES  KI        +  +       +T+ T +  + + N ++
Sbjct: 194  AKDTPPTLTEIHERLLNHES--KILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRY 253

Query: 353  KKKKGGQGNK----ANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCP--KYLAKKKKAKQ 412
              +     +K    ++        ++K   G C +C  +GH  + C   ++      ++Q
Sbjct: 254  DNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQ 313

Query: 413  GKYDL--------LVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRV 472
                         L L +    N+   W++DSGAT+H+ S F  + S  Q  TG   + V
Sbjct: 314  PPSPFTPWQPRANLALGSPYSSNN---WLLDSGATHHITSDFNNL-SLHQPYTGGDDVMV 373

Query: 473  GTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE------QSYSLTFN 532
              G  +     G   L  +   L L N+  VP++ +NLISV  L        + +  +F 
Sbjct: 374  ADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQ 433

Query: 533  VNKVFIYKNGVEICSAKLENNLYVLRSLTSKAILNTEMFKTAITQNKRLKISPKENAHLW 592
            V  +     GV +   K ++ LY     +S+ +    +F +          S K     W
Sbjct: 434  VKDL---NTGVPLLQGKTKDELYEWPIASSQPV---SLFASP---------SSKATHSSW 493

Query: 593  HLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELV 652
            H RLGH   + +  ++ N  LS L   +    C  CL  K  K PF+     +  PLE +
Sbjct: 494  HARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYI 553

Query: 653  HSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTI 712
            +SD+     + +   + Y++ F D ++RY ++Y ++ KS+  E F  +K  +EN     I
Sbjct: 554  YSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 613

Query: 713  KTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAH 772
             TF SD GGE++ L    Y  + GI    S P TP+ NG+SER++R +++   +++S+A 
Sbjct: 614  GTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHAS 673

Query: 773  LPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGHKGSLRHFRIWGCPAH--VLENNP 832
            +P ++W YA   AVY++N +P+  +  E+P +   G   +    R++GC  +  +   N 
Sbjct: 674  IPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQ 733

Query: 833  KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE-----------DHIREH 892
             KL+ +S+ C+F+GY            + +++++S +  F E              ++E 
Sbjct: 734  HKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQ 793

Query: 893  KPRSKIVLNELSKETTEPSTRVV----------------EEPSALIRVVHVGSS------ 952
            +  S  V    S  TT P+   V                  PSA  R   V SS      
Sbjct: 794  RRESSCV---WSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSF 853

Query: 953  ----------------------------TRTHQ-----------------PQSLREPRRS 1012
                                        T+TH                   QSL  P +S
Sbjct: 854  SSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQS 913

Query: 1013 GRVTNLPIRYMSLTET--------------LTVISDGDIEDPLTF--------------- 1072
               +  P    S + T              L  I + + + PL                 
Sbjct: 914  SSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPN 973

Query: 1073 ---------------KKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCK 1132
                           + A++ +  + W  AM  E+ +   N  WDLV  P   V  +GC+
Sbjct: 974  PKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCR 1033

Query: 1133 WIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEI 1192
            WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L +A    + I
Sbjct: 1034 WIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPI 1093

Query: 1193 WQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI 1252
             Q+DV  AFL G L + +YM QP GFI   +   +CKL +++YGLKQA R+W +     +
Sbjct: 1094 RQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYL 1153

Query: 1253 KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLG 1312
             + GF   V +  ++     KS+ ++++YVDDIL+ GND  LL +    L+ +F +KD  
Sbjct: 1154 LTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHE 1213

Query: 1313 EAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSK------ 1372
            E  + LGI+    R    L LSQ  YI  ++ + +M  +K    P      LS       
Sbjct: 1214 ELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKL 1273

Query: 1373 ------------------EQPDICYAVGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTL 1421
                               +PDI YAV  +S++   P   H  A+K IL+YL  T ++ +
Sbjct: 1274 TDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGI 1333

[Close]

BLAST of IVF0020901 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 2.3e-127
Identity = 380/1482 (25.64%), Postives = 624/1482 (42.11%), Query Frame = 0


Query: 117  LNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPA---ANATRTVREPYERW 176
            +NM    KL   NY  W   ++ +    +L   L    P  PA    +A   V   Y RW
Sbjct: 18   VNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRW 77

Query: 177  AKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARM 236
             + ++   + IL ++S  +        TA +I ++L++++   SY               
Sbjct: 78   RRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSY--------------- 137

Query: 237  NEGASVREHV--LNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 296
                    HV  L  +  F+   +    +D   QV  +LE+LP+ +              
Sbjct: 138  -------GHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPP 197

Query: 297  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 356
            +LT +   L   ES +          +  +       +T+  ++    + N      +  
Sbjct: 198  SLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSN 257

Query: 357  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAK-----------QG 416
                ++  +    ++ K   G C +C+ +GH  + CP+    +               Q 
Sbjct: 258  SWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQP 317

Query: 417  KYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAI 476
            + +L V       N    W++DSGAT+H+ S F  + S+ Q  TG   + +  G  +   
Sbjct: 318  RANLAVNSPYNANN----WLLDSGATHHITSDFNNL-SFHQPYTGGDDVMIADGSTIPIT 377

Query: 477  AVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE------QSYSLTFNVNKVFIYKN 536
              G   L      L L  V  VP++ +NLISV  L        + +  +F V  +     
Sbjct: 378  HTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDL---NT 437

Query: 537  GVEICSAKLENNLYVLRSLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINL 596
            GV +   K ++ LY     +S+A+    MF +  +         K     WH RLGH +L
Sbjct: 438  GVPLLQGKTKDELYEWPIASSQAV---SMFASPCS---------KATHSSWHSRLGHPSL 497

Query: 597  NRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMN 656
              +  ++ N  L  L   + L  C  C   K  K PF+     + +PLE ++SD+     
Sbjct: 498  AILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SP 557

Query: 657  VKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGG 716
            + +   + Y++ F D ++RY ++Y ++ KS+  + F  +K+ VEN     I T  SD GG
Sbjct: 558  ILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGG 617

Query: 717  EYMDLKFQNYLMECGIVSQLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYA 776
            E++ L+  +YL + GI    S P TP+ NG+SER++R +++M  +++S+A +P ++W YA
Sbjct: 618  EFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYA 677

Query: 777  VQTAVYILNCVPSKSVS-ETPLKLWNGHKGSLRHFRIWGCPAH--VLENNPKKLEPRSKL 836
               AVY++N +P+  +  ++P +   G   +    +++GC  +  +   N  KLE +SK 
Sbjct: 678  FSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQ 737

Query: 837  CLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE---------DHIREHKPRSKIVLNEL 896
            C F+GY               +++ S +  F E                + RS    N  
Sbjct: 738  CAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWP 797

Query: 897  SKETTEPSTRVVEEPSAL----------------IRVVHVGSS----------------- 956
            S  T   +  V+  P  L                +    V SS                 
Sbjct: 798  SHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTA 857

Query: 957  ---------TRTHQPQ-----------------SLREPRRSGRVTNLPIRYMSLTETLTV 1016
                      + HQ Q                 S   P ++  +   PI    +    T 
Sbjct: 858  PSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTS 917

Query: 1017 ISDGDI------------------------------------------------------ 1076
            IS+ +                                                       
Sbjct: 918  ISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATS 977

Query: 1077 ----EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYKR 1136
                 +P T  +AM+D   D W +AM  E+ +   N  WDLV   P  V  +GC+WI+ +
Sbjct: 978  LAANSEPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1037

Query: 1137 KRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDV 1196
            K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L +A    + I Q+DV
Sbjct: 1038 KFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1097

Query: 1197 KTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGF 1256
              AFL G L + +YM QP GF+   +   +C+L ++IYGLKQA R+W +   T + + GF
Sbjct: 1098 NNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGF 1157

Query: 1257 DQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFV 1316
               + +  ++     +S+ ++++YVDDIL+ GND  LL      L+ +F +K+  +  + 
Sbjct: 1158 VNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYF 1217

Query: 1317 LGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFR-------HGVT------- 1376
            LGI+    R  + L LSQ  Y   ++ + +M  +K    P         H  T       
Sbjct: 1218 LGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE 1277

Query: 1377 ----------LSKEQPDICYAVGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTL-VYGS 1421
                      L+  +PD+ YAV  +S+Y   P   HW A+K +L+YL  T D+ + +   
Sbjct: 1278 YRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKG 1337

[Close]

BLAST of IVF0020901 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.5e-30
Identity = 308/1505 (20.47%), Postives = 532/1505 (35.35%), Query Frame = 0


Query: 256  NEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGE 315
            N   + +      IL+ L   F   R N    K    L+ L  E+Q      KI      
Sbjct: 296  NNINVSDRLACQLILKGLSGDFKYLR-NQYRTKTNMKLSQLFAEIQLIYDENKIMNLN-- 355

Query: 316  ANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICF 375
                 S  K H    + +++ P+++ N K   +   + N +   AAK    A ++K    
Sbjct: 356  ---KPSQYKQHSEYKNVSRTSPNTT-NTKVTTRNYHRTNSSKPRAAKAHNIATSSK-FSR 415

Query: 376  LCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCLVENDDSA---WIIDSGATNHVCSS 435
            + N   +      +YL+   +   G+       T  ++++D      +IDSGA+  +  S
Sbjct: 416  VNNDHINESTVSSQYLSDDNELSLGQQQKESKPTHTIDSNDELPDHLLIDSGASQTLVRS 475

Query: 436  FQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISV 495
               +         E+ +       +   A+G L    Q            P++  +L+S+
Sbjct: 476  AHYLH--HATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKALHTPNIAYDLLSL 535

Query: 496  KCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKAILNTEMFKTAITQNK 555
              L  Q+ +  F  N      +G  +       + Y    L+ K ++ + + K  I    
Sbjct: 536  SELANQNITACFTRN-TLERSDGTVLAPIVKHGDFY---WLSKKYLIPSHISKLTINNVN 595

Query: 556  RLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLP-------VCESCLEGKM 615
            + K   K    L H  LGH N   I++ +K   ++ L+E+ +         C  CL GK 
Sbjct: 596  KSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKS 655

Query: 616  TKRPFTGKGHRAK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQ 675
            TK     KG R K     EP + +H+D+ GP++   +    YFI+FTD+ +R+ +VY + 
Sbjct: 656  TKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLH 715

Query: 676  HKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPDT 735
             + E   L  F    A ++N  +  +   + DRG EY +     +    GI +  +    
Sbjct: 716  DRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTAD 775

Query: 736  PQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWN 795
             + +GV+ER NRTLL+  R+++  + LPN  W  AV+ +  I N + S   ++   +   
Sbjct: 776  SRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPK-NDKSARQHA 835

Query: 796  GHKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVS 855
            G  G  +     +G P  V  +NP  K+ PR      +   + + G   Y P   K   +
Sbjct: 836  GLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDT 895

Query: 856  TNATFLEEDHIR------------------------------------------------ 915
            TN   L+++  +                                                
Sbjct: 896  TNYVILQDNQSKLDQFNYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSE 955

Query: 916  ----------------------EHKPRSKI--------------------------VLNE 975
                                  +H+P  K+                          ++N+
Sbjct: 956  IEINSDPLVNDFSSQSMNPLQLDHEPVQKVRALKEVDADISEYNILPSPVRSRTPHIINK 1015

Query: 976  LSKE--------TTEP------STRVVEEPSALIRVVHVGSSTR-THQPQSLREPRRSG- 1035
             S E        TT P      + R  + P +   ++ + S  R  ++ ++++  R  G 
Sbjct: 1016 ESTEMGGTIESDTTSPRHSSTFTARNQKRPGSPNDMIDLTSQDRVNYELENIKTTRLGGT 1075

Query: 1036 ---------------RVTN----------------------------------------- 1095
                           R TN                                         
Sbjct: 1076 EEPYIQRNSDTNIKYRTTNSTPSIDDRSPDSDSTTPIISIETKAACDNTPSIDTDPPEYR 1135

Query: 1096 --------------------------LPIRYM---SLTETLTVISD-------------G 1155
                                      LP+  +   S T+T  V  D             G
Sbjct: 1136 SSDHATPNIMPDKSSKNVTADSILDDLPLPDLTNKSPTDTSDVSKDIPHIHSRQTNSSLG 1195

Query: 1156 DIEDPLTF------KKAMED---------------------------------------- 1215
             ++D          K+++ED                                        
Sbjct: 1196 GMDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKS 1255

Query: 1216 --------------------VDKDEWIKAMNLELESMYFNSVWDL-----VDQPDGVKPI 1275
                                 +KD +I+A + E+  +   + WD       +  D  K I
Sbjct: 1256 IKPVRTTLRYDEAITYNEDNKEKDRYIEAYHKEINQLLRMNTWDTNKYYDRNDIDPKKVI 1315

Query: 1276 GCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFD 1335
               +I+ +KR  DG   T KAR VA+G  Q       +  S      ++   LSIA   D
Sbjct: 1316 NSMFIFNKKR--DG---THKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDND 1375

Query: 1336 YEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFD 1395
            Y I Q+D+ +A+L  +++E +Y++ P      G   K+ +L +S+YGLKQ+  +W   ++
Sbjct: 1376 YYITQLDISSAYLYADIKEELYIRPPPHL---GLNDKLLRLRKSLYGLKQSGANW---YE 1435

Query: 1396 TAIKSY-----GFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLAT 1409
            T IKSY        ++    CV+K     S   + L+VDD++L   D+     I   L  
Sbjct: 1436 T-IKSYLINCCDMQEVRGWSCVFK----NSQVTICLFVDDMILFSKDLNANEKIITTLKK 1495

[Close]

BLAST of IVF0020901 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 2570.0 bits (6660), Expect = 0.0e+00
Identity = 1296/1343 (96.50%), Postives = 1303/1343 (97.02%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNTIN VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKKAKAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1424
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 2568.5 bits (6656), Expect = 0.0e+00
Identity = 1295/1343 (96.43%), Postives = 1302/1343 (96.95%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNTIN VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKK KAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1424
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 2564.3 bits (6645), Expect = 0.0e+00
Identity = 1295/1343 (96.43%), Postives = 1302/1343 (96.95%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNT N VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNT-NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKKAKAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1424
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. ExPASy TrEMBL
Match: A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)

HSP 1 Score: 2533.4 bits (6565), Expect = 0.0e+00
Identity = 1279/1325 (96.53%), Postives = 1285/1325 (96.98%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNTIN VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKKAKAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1406
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 2531.9 bits (6561), Expect = 0.0e+00
Identity = 1278/1325 (96.45%), Postives = 1284/1325 (96.91%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNTIN VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKK KAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1406
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2563 bits (6644), Expect = 0.0
Identity = 1296/1343 (96.50%), Postives = 1303/1343 (97.02%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNTIN VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKKAKAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1423
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2562 bits (6640), Expect = 0.0
Identity = 1295/1343 (96.43%), Postives = 1302/1343 (96.95%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNTIN VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKK KAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1423
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2558 bits (6629), Expect = 0.0
Identity = 1295/1343 (96.43%), Postives = 1302/1343 (96.95%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNT N VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNT-NTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKKAKAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1423
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2528 bits (6551), Expect = 0.0
Identity = 1279/1325 (96.53%), Postives = 1285/1325 (96.98%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNTIN VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKKAKAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1405
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2526 bits (6547), Expect = 0.0
Identity = 1278/1325 (96.45%), Postives = 1284/1325 (96.91%), Query Frame = 0


Query: 112  LSSATLNMLAADKLNGNNYASWKNTINIVLIIDDLRFVLVEDCPQVPAANATRTVREPYE 171
            ++SATLNMLAADKLNGNNYASWKNTIN VLIIDDLRFVLVE+CPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 172  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 231
            RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 232  RMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 291
            RMNEGASVREHVLNMMVHFNVA MN AVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 292  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 351
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 352  QGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKKKAKQGKYDLLVLETCL 411
            QGNKANLAAAKTTKK KAAKGICF CNQEGHWKRNCPKYLA+KKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 412  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 471
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 472  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 531
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 532  SLTSKAILNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 591
            SLTSKA+LNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 592  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 651
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 652  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 711
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 712  QLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 771
            QLSAP TPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 772  TPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 831
            TPLKLWNG KGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 832  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVGSSTRT 891
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 892  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 951
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 952  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 1011
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 1012 EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 1071
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1072 KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1131
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1132 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1191
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1192 YSMQNSKRGLLPFRHGVTLSKEQ-------------------------------PDICYA 1251
            YSMQNSKRGLLPFRHGVTLSKEQ                               PDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1252 VGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1311
            VGIVSRYQSNPGLAHWTA+KTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1312 TSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1371
            TS SVFTLNGGAVVWRSIKQ CIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1372 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1405
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0020901 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 291.6 bits (745), Expect = 3.5e-78
Identity = 162/477 (33.96%), Postives = 265/477 (55.56%), Query Frame = 0


Query: 929  EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGAD 988
            ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +D
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 989  GKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFL 1048
            G ++ +KARLVAKGYTQ EG+D+ ETFSPV  L S++++L+I+A +++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 1049 NGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 1108
            NG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 1109 QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVL 1168
            Q   +   + +I       +++YVDDI++  N+   + ++K  L + F+++DLG  ++ L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 1169 GIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE----------- 1228
            G++I R      + + Q  Y   ++ +  +   K   +P    VT S             
Sbjct: 324  GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 383

Query: 1229 -------------QPDICYAVGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTLVYGSK- 1288
                         + DI +AV  +S++   P LAH  A+  IL Y++ T    L Y S+ 
Sbjct: 384  RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 443

Query: 1289 DLILTGYTDSDFQTDRDSRKSTSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAA 1348
            ++ L  ++D+ FQ+ +D+R+ST+     L    + W+S KQ+ ++ S+ EAEY A   A 
Sbjct: 444  EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 503

Query: 1349 KEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE 1377
             E +WL  F  +L++   +SKP  L+CDN+ A+  +     H+R KHIE   H +RE
Sbjct: 504  DEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of IVF0020901 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-17
Identity = 71/226 (31.42%), Postives = 107/226 (47.35%), Query Frame = 0


Query: 1123 FLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQA 1182
            +L+LYVDDILL G+   LL  +   L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 1183 SYIDKIVVKYSMQNSKRGLLP-------------------FRHGV----TLSKEQPDICY 1242
             Y ++I+    M + K    P                   FR  V     L+  +PDI Y
Sbjct: 62   KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 121

Query: 1243 AVGIVSRYQSNPGLAHWTAIKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSR 1302
            AV IV +    P LA +  +K +L+Y++ T  + L ++ +  L +  + DSD+     +R
Sbjct: 122  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 181

Query: 1303 KSTSDSVFTLNGGAVVWRSIKQRCIADSTMEAEYVAACEAAKEAVW 1325
            +ST+     L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0020901 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 901  RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 960
            R    +  L  +Y SLT T T+      ++P +   A++D     W +AM  EL+++  N
Sbjct: 4    RSKAGINKLNPKY-SLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALSRN 63

Query: 961  SVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM 1020
              W LV  P     +GCKW++K K  +DG +   KARLVAKG+ Q EG+ + ET+SPV  
Sbjct: 64   KTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 123

Query: 1021 LKSIRILLSIA 1032
              +IR +L++A
Sbjct: 124  TATIRTILNVA 125

[Close]

BLAST of IVF0020901 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 68.2 bits (165), Expect = 6.2e-11
Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 549 TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKR 608
           T    L  + K+   LWH RL H++   +E LVK G L   + +SL  CE C+ GK  + 
Sbjct: 56  TGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRV 115

Query: 609 PFTGKGHRAKEPLELVHSDLCGPMNV 635
            F+   H  K PL+ VHSDL G  +V
Sbjct: 116 NFSTGQHTTKNPLDYVHSDLWGAPSV 141

[Close]

BLAST of IVF0020901 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 7.1e-07
Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 729 NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGHKGSLRHF 788
           NRT+++ VRSM+    LP +F   A  TAV+I+N  PS +++   P ++W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 789 RIWGCPAHVLENNPKKLEPRSK 810
           R +GC A++   +  KL+PR+K
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of IVF0020901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.4e-201	33.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.4e-142	28.25	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.2e-130	26.03	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.3e-127	25.64	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q12491	4.5e-30	20.47	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of IVF0020901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	0.0e+00	96.50	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	0.0e+00	96.43	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TZD7	0.0e+00	96.43	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5A7UGV2	0.0e+00	96.53	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269...	[more]
A0A5D3CSZ6	0.0e+00	96.45	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]

BLAST of IVF0020901 vs. NCBI nr


Match Name	Identity	Description
KAA0031826.1	96.50	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]
KAA0035879.1	96.43	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0048404.1	96.43	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	96.53	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	96.45	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0020901 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.5e-78	33.96	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.5e-17	31.42	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.1e-15	37.40	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00300.1	6.2e-11	39.53	Gag-Pol-related retrotransposon family protein	[more]
ATMG00710.1	7.1e-07	35.37	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 662..682
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 173..304 e-value: 7.7E-16 score: 58.1
None	No IPR available	GENE3D	4.10.60.10		coord: 340..404 e-value: 8.3E-7 score: 30.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..340
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 923..1255 coord: 419..848
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1264..1405 e-value: 9.52442E-63 score: 208.091
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 373..389 e-value: 1.1E-4 score: 31.6
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 373..389 e-value: 5.3E-5 score: 23.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 374..389 score: 9.751616
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 556..605 e-value: 5.2E-14 score: 51.9
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 960..1203 e-value: 1.4E-75 score: 254.0
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 618..719 e-value: 7.6E-10 score: 39.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 616..781 score: 22.946728
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 613..789 e-value: 2.0E-38 score: 133.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 960..1372
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 615..775
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 365..395

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020901.1	IVF0020901.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding