IVF0020877 (gene) Melon (IVF77) v1

Overview
NameIVF0020877
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 235676 .. 236216 (-)
RNA-Seq ExpressionIVF0020877
SyntenyIVF0020877
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCTATCTATCTATCTATCAATCTATCTATCTATCTATCAGTCTATCTATCTCCCCAACTCCATTTCGCCTCTCCTTTTCTCTTCCACTTCACTACTAAACTCTCACATCACTCCAATGTGGCTGCCCAAGAACAACGCCCCCAAAACTACCACATCTTCTACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAAGCCATCCTCCTCCCACTGCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTACCACCACCGGAGACAGCAGCAGCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTCAATTTCGACACCAGCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCAGTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAGCGCCATCTCTATACCCCTACCATTTTTCTTTCCCCCTTTCTTTATCCTTCTTTAAACCTGT

mRNA sequence

GGTCTATCTATCTATCTATCAATCTATCTATCTATCTATCAGTCTATCTATCTCCCCAACTCCATTTCGCCTCTCCTTTTCTCTTCCACTTCACTACTAAACTCTCACATCACTCCAATGTGGCTGCCCAAGAACAACGCCCCCAAAACTACCACATCTTCTACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAAGCCATCCTCCTCCCACTGCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTACCACCACCGGAGACAGCAGCAGCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTCAATTTCGACACCAGCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCAGTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAGCGCCATCTCTATACCCCTACCATTTTTCTTTCCCCCTTTCTTTATCCTTCTTTAAACCTGT

Coding sequence (CDS)

ATGTGGCTGCCCAAGAACAACGCCCCCAAAACTACCACATCTTCTACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAAGCCATCCTCCTCCCACTGCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTACCACCACCGGAGACAGCAGCAGCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTCAATTTCGACACCAGCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCAGTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAG

Protein sequence

MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR
Homology
BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A5A7UFE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00320 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSS 60
           MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSS
Sbjct: 1   MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSS 60

Query: 61  PFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR 120
           PFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR
Sbjct: 61  PFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR 120

BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A0A0KMC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526510 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.7e-56
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0

Query: 1   MWLPKNNAPKTTTSSTT----AAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTG 60
           MWLP NNAPKTTTSSTT    AAVTPTSLAPKPSSS+CN LAKLLRKLKKRSRVLC+TTG
Sbjct: 1   MWLPNNNAPKTTTSSTTTTAAAAVTPTSLAPKPSSSNCNFLAKLLRKLKKRSRVLCSTTG 60

Query: 61  DSSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTL 120
           +SSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTL
Sbjct: 61  ESSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTL 120

BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A6J1EFV9 (uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC111433012 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.5e-38
Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 0

Query: 1   MWLPKNNA---PKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGD 60
           +W PKNNA    KT TSS  AAVT TSLA K SSS+CNC AKLLRKLKKRSRVL +T G+
Sbjct: 4   LWWPKNNASADAKTCTSS--AAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGE 63

Query: 61  SSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLP 120
           SSS FQCRYDPLSYSLNFDTSGCG LLD+HYYQY CAFSSRFASNPGN+S HS P  T+ 
Sbjct: 64  SSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQY-CAFSSRFASNPGNVS-HSAPVATVT 122

BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A6J1EF60 (uncharacterized protein LOC111433647 OS=Cucurbita moschata OX=3662 GN=LOC111433647 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.4e-38
Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 0

Query: 1   MWLPKNN--APKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDS 60
           +W PKN+  A KT+TSS TAAVT TSLA K SSSHCN +AKLLRKLKKR RVLC+TTG+S
Sbjct: 7   LWWPKNSSAAAKTSTSSATAAVTATSLATKVSSSHCNRIAKLLRKLKKRGRVLCSTTGES 66

Query: 61  SSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPT 120
           SS FQCRYDPLSYSLNFDTSGCGSLLD+HYYQ FC FSSRFASNPG +S    P  T+  
Sbjct: 67  SSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQ-FCTFSSRFASNPGTVS-RPAPDGTVTA 126

BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A6J1IQV7 (uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 0

Query: 1   MWLPKNNA---PKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGD 60
           +W PKNNA    KT TSS  AAVT TSLA K SSS+ NC AKLLRKLKKRSRVL +T G+
Sbjct: 4   LWWPKNNASSGAKTCTSS--AAVTATSLARKASSSNYNCFAKLLRKLKKRSRVLRSTAGE 63

Query: 61  SSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLP 120
           SSS FQCRYDPLSYSLNFDTSGCG LLD+HYYQY CAFSSRFASNPGN+S HS P VT+ 
Sbjct: 64  SSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQY-CAFSSRFASNPGNVS-HSAPVVTVT 122

BLAST of IVF0020877 vs. NCBI nr
Match: KAA0052435.1 (hypothetical protein E6C27_scaffold120G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 245 bits (625), Expect = 8.86e-82
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSS 60
           MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSS
Sbjct: 1   MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSS 60

Query: 61  PFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR 120
           PFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR
Sbjct: 61  PFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR 120

BLAST of IVF0020877 vs. NCBI nr
Match: XP_023543928.1 (uncharacterized protein LOC111803650 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169 bits (428), Expect = 1.06e-51
Identity = 95/123 (77.24%), Postives = 103/123 (83.74%), Query Frame = 0

Query: 1   MWLPKNNAP---KTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGD 60
           +W PKNNA    KT TSS+ AAVT TSLA K SSS+CNC AKLLRKLKKRSRVL +T G+
Sbjct: 4   LWWPKNNASAGAKTCTSSS-AAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGE 63

Query: 61  SSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLP 120
           SSS FQCRYDPLSYSLNFDTSGCG LLD+HYYQY CAFSSRFASNPGN+S HS P VT+ 
Sbjct: 64  SSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQY-CAFSSRFASNPGNVS-HSAPVVTVT 123

BLAST of IVF0020877 vs. NCBI nr
Match: KAG6594391.1 (hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167 bits (424), Expect = 4.33e-51
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0

Query: 1   MWLPKNN--APKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDS 60
           +W PKN+  A KT+TSS TAAVT TSLA K SSSHCN +AKLLRKLKKR RVLC+TTG+S
Sbjct: 4   LWWPKNSSAAAKTSTSSATAAVTATSLATKVSSSHCNRIAKLLRKLKKRGRVLCSTTGES 63

Query: 61  SSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPT 120
           SS FQCRYDPLSYSLNFDTSGCGSLLD+HYYQ FCAFSSRFASNPG +S  + P  T+  
Sbjct: 64  SSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQ-FCAFSSRFASNPGTVSRPA-PDGTVTA 123

BLAST of IVF0020877 vs. NCBI nr
Match: KAG7026395.1 (hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167 bits (424), Expect = 4.76e-51
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0

Query: 1   MWLPKNN--APKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDS 60
           +W PKN+  A KT+TSS TAAVT TSLA K SSSHCN +AKLLRKLKKR RVLC+TTG+S
Sbjct: 7   LWWPKNSSAAAKTSTSSATAAVTATSLATKVSSSHCNRIAKLLRKLKKRGRVLCSTTGES 66

Query: 61  SSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPT 120
           SS FQCRYDPLSYSLNFDTSGCGSLLD+HYYQ FCAFSSRFASNPG +S  + P  T+  
Sbjct: 67  SSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQ-FCAFSSRFASNPGTVSRPA-PDGTVTA 126

BLAST of IVF0020877 vs. NCBI nr
Match: XP_022925663.1 (uncharacterized protein LOC111433012 [Cucurbita moschata] >KAG6581516.1 hypothetical protein SDJN03_21518, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034807.1 hypothetical protein SDJN02_04539, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167 bits (423), Expect = 5.96e-51
Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 0

Query: 1   MWLPKNNAP---KTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGD 60
           +W PKNNA    KT TSS  AAVT TSLA K SSS+CNC AKLLRKLKKRSRVL +T G+
Sbjct: 4   LWWPKNNASADAKTCTSS--AAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAGE 63

Query: 61  SSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLP 120
           SSS FQCRYDPLSYSLNFDTSGCG LLD+HYYQY CAFSSRFASNPGN+S HS P  T+ 
Sbjct: 64  SSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQY-CAFSSRFASNPGNVS-HSAPVATVT 122

BLAST of IVF0020877 vs. TAIR 10
Match: AT4G19980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16
Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 0

Query: 14  SSTTAAVTPTSLAPKPSSSHC-NCLAKLLRKLKKRSRVL--CTTTGDSSSPFQCRYDPLS 73
           ++T  AVT  S  P P+ + C  CLA+L+RKLKK+ R+L   +T     S  QCRYDP+S
Sbjct: 12  ATTATAVTKKSNVPTPTPNCCVTCLARLIRKLKKKGRLLLATSTARRQGSSLQCRYDPMS 71

Query: 74  YSLNFDTSGCGSLLDDH-YYQYFCAFSSRFASNPGNL 107
           YSLNFD   CG+L DD  YY  F AFSSR+ +   N+
Sbjct: 72  YSLNFDGGACGTLPDDEDYYLRFYAFSSRYVTTTNNI 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UFE11.2e-61100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KMC62.7e-5692.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526510 PE=4 SV=1[more]
A0A6J1EFV92.5e-3876.42uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC1114330... [more]
A0A6J1EF607.4e-3874.59uncharacterized protein LOC111433647 OS=Cucurbita moschata OX=3662 GN=LOC1114336... [more]
A0A6J1IQV71.6e-3776.42uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613... [more]
Match NameE-valueIdentityDescription
KAA0052435.18.86e-82100.00hypothetical protein E6C27_scaffold120G00320 [Cucumis melo var. makuwa][more]
XP_023543928.11.06e-5177.24uncharacterized protein LOC111803650 [Cucurbita pepo subsp. pepo][more]
KAG6594391.14.33e-5175.41hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026395.14.76e-5175.41hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022925663.15.96e-5176.42uncharacterized protein LOC111433012 [Cucurbita moschata] >KAG6581516.1 hypothet... [more]
Match NameE-valueIdentityDescription
AT4G19980.11.2e-1649.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR33168:SF42EXPRESSED PROTEINcoord: 11..103
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 11..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0020877.1IVF0020877.1mRNA