IVF0020877 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTCTATCTATCTATCTATCAATCTATCTATCTATCTATCAGTCTATCTATCTCCCCAACTCCATTTCGCCTCTCCTTTTCTCTTCCACTTCACTACTAAACTCTCACATCACTCCAATGTGGCTGCCCAAGAACAACGCCCCCAAAACTACCACATCTTCTACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAAGCCATCCTCCTCCCACTGCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTACCACCACCGGAGACAGCAGCAGCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTCAATTTCGACACCAGCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCAGTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAGCGCCATCTCTATACCCCTACCATTTTTCTTTCCCCCTTTCTTTATCCTTCTTTAAACCTGT GGTCTATCTATCTATCTATCAATCTATCTATCTATCTATCAGTCTATCTATCTCCCCAACTCCATTTCGCCTCTCCTTTTCTCTTCCACTTCACTACTAAACTCTCACATCACTCCAATGTGGCTGCCCAAGAACAACGCCCCCAAAACTACCACATCTTCTACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAAGCCATCCTCCTCCCACTGCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTACCACCACCGGAGACAGCAGCAGCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTCAATTTCGACACCAGCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCAGTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAGCGCCATCTCTATACCCCTACCATTTTTCTTTCCCCCTTTCTTTATCCTTCTTTAAACCTGT ATGTGGCTGCCCAAGAACAACGCCCCCAAAACTACCACATCTTCTACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAAGCCATCCTCCTCCCACTGCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTACCACCACCGGAGACAGCAGCAGCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTCAATTTCGACACCAGCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCAGTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAG MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR Homology
BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A5A7UFE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00320 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A0A0KMC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526510 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.7e-56 Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A6J1EFV9 (uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC111433012 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.5e-38 Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 0
BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A6J1EF60 (uncharacterized protein LOC111433647 OS=Cucurbita moschata OX=3662 GN=LOC111433647 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.4e-38 Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of IVF0020877 vs. ExPASy TrEMBL
Match: A0A6J1IQV7 (uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37 Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 0
BLAST of IVF0020877 vs. NCBI nr
Match: KAA0052435.1 (hypothetical protein E6C27_scaffold120G00320 [Cucumis melo var. makuwa]) HSP 1 Score: 245 bits (625), Expect = 8.86e-82 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of IVF0020877 vs. NCBI nr
Match: XP_023543928.1 (uncharacterized protein LOC111803650 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169 bits (428), Expect = 1.06e-51 Identity = 95/123 (77.24%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of IVF0020877 vs. NCBI nr
Match: KAG6594391.1 (hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 167 bits (424), Expect = 4.33e-51 Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of IVF0020877 vs. NCBI nr
Match: KAG7026395.1 (hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 167 bits (424), Expect = 4.76e-51 Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of IVF0020877 vs. NCBI nr
Match: XP_022925663.1 (uncharacterized protein LOC111433012 [Cucurbita moschata] >KAG6581516.1 hypothetical protein SDJN03_21518, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034807.1 hypothetical protein SDJN02_04539, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 167 bits (423), Expect = 5.96e-51 Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 0
BLAST of IVF0020877 vs. TAIR 10
Match: AT4G19980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16 Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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