IVF0020876 (gene) Melon (IVF77) v1

Overview


Name	IVF0020876
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	transcription factor HY5
Location	chr04: 3024076 .. 3027102 (+)
RNA-Seq Expression	IVF0020876
Synteny	IVF0020876

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTCCATTGCCTTTTAATAAGCAGAGCTTTCCAATTTTTCATCTCATATCAATCTTTTCGGTGTTGATTATTCGCCGGCGTAATGCAGGGACGAGCCGCCGCCGCCGCCATCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGGTTTAATTTGAATTTCTTCCGTTTTCTTTACGATCTCTAGCGGAAATATTGAGCGTGAAGTAGTGCAGCCGGATGTCGTTAGGAAGAGCTTTTTTTTTTTTTTTTGCCTTGTTCTTTTGATTCATCGGAGACGAGTTTGTTTTTCAAAATCAAATCATTGTTTCATTTTATCATCGTTCGTTTTACTGTCTTTTTCCACGGCGAAATTGCAAAAGCGGCTCTGTATTCGATTGAAGCATATTTTCCTAACCTAATTTCGTAACAATATGACAATTTCTCCTAAGCGATTATCCTTCCTCGTTCAAGCTTGTGTAAAAATTGTTGACGTAGATCCGTGTATATAATTACTAATAATAAGTTTCTGGAATCTCATCCTGATTTTGTTTTTCGTTTTCTGGAGAATTACGTTATATATATTGTTTCTTTTCTTTACTGCAGATATAGGAGCGGAGAGTGATGAGGAGGAGATAAGCAGAGTTCCGCAGATCTGCGGCAACTCCGGCTCCACCGTCGGCATTTCAGCGCCAGGTAAAGCGCCCGCATCAGATAGCGTAAGGAGCAGAGGGCGAAGTGCGGCTGAGAAAGAAAGCAAAAGGCTGAAGAGGTAAGATTTTAGGTCTAGAATAAGGTAAAAAAGTAGCGTATAATTGCAAATTTCTTCTGTCGTATCGTATGTGGAGGAAATACTGGTAGCTGAATGCCATTTTCGTGTCCTGAAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGTGTACTTAAGCGAGTTGGAAGAAAGGGCAACAAATTTGGAGAAAAGGAACTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAGAATGAGAATCAAATGCTTAGACACGTACGTCAAACTAAACCCTCTCCTTTAGCTCTATTCGTAAATATCTTTGTTCATGACGGATCTAACATAGACCCAAAAGCTTCAACCTCCTCAATTTTAGTATTAATGCCCTTAGCAAGCATAGTGGTGAATATATATGTCTTGAACCTTCGCACTTAGGTTTCCCACCTTTTTGGTCGGCTCGATAATATAAAAAAAATTATTTCAATTTTTTATCCAACACAATTTTAATTTGTTTTTATTAATTCTACCCATCTATTATGTGCTAAATTGTAGCGTTGAGGTGTTGGTTCCTATTAAACCTAAACTTAAAATTTATGTTTAATAGATTATTATCTTTGTTGAATTTCGGCACCTTTGTCCTTTAGTTTTATAGGTATCTATCTATGGATTTGGTGTTTAGCAAAAGTCTTGTCTTTCTATTCTTATTCTTATTTTTAATGTTTATTAGATCCCATGATTTCATTTTAAGGAAAAAAAAGGTTAGAATGATATAAACTTATGATACACTGAAGTTTAAAGTTTAAAGCAACTTACTTAGATTTTTGTTTAAAACGGCAGTAAAAGATGAAACCAACTAAAATTGCTTTTCTAAAACTATTAAATACAAAAACAACTGTTTGTGAATTCATCTAATTTTTATTAAACTTTTCTTACAATGATGAGATGGGCCATCATCGACTAGGTAATGTCATTTATTAGATAAATTATTGTATGGTTGGCCCACCCCTTATGTCGCCTCTTTCCCATTTGTGAAGAACTACTTAATCATGCATTTTCCAATTTAACGGTATATATAGGAAAATATTAATAAAATATAACAAAATCTTATTAAATATTTTGAAATTTACTCTATTTTATAAATATTTTAATTTAATTTGTTATATTTTGAATTATATATATAGATTTGTATGTCATAAATTATAATTATATTACATTTACCTTCTCGATTTTAGATTTGTTTGGATTGATTTTTTATATTTATAAGTAAAAGATAATTGTTCGGAACTTTTAATTTGTTCTTAGATAGTCTTGACTTTGAATAATACGTGGAATAACCTTTTTAATCTATTAGTTAATGATTATTATACAGATACTGAAGAACACAACAACCAACAAAAAAAGTGATACCGATGCTACTAAATGCTAAGGGAAACGAAACCAAAATCGATATAGCGGTATGACAAGGTAAATTTACTCTAGTATTAGTATGTGTACATAATAACCATGTCGACTCAAAAGAAATTAAATGAATAATTAAGTATGGGGTAGGCTTTAATTTCATGTGTCGGGATAAATTATTTAACATGACTAATACAAATATTTGTTGCTTTTATATAATCATTTGATGTATGATAAAGAAACTGGAAATTTCTTAGCAGTTTAGTCTATCAAACATAGTTAAAGAGGGTAACAACTTAGTCATTATTCTTCATCAATTCGATGATTTTAACTTTTCATTGATTTCTTGATCAAAGTGTATAAGAAAAATTATTAAAATTTACTAATAGTTTTTTTCTTTATTAGAGGTTAAATTGTTTCAAACTACTAAAAAGTCGATAATTATTATAAGAGGATAGTAATTGGGAGAGGTGACTTAAATAACAAAGTAAGAAATGATTGGGCTGAATAGCTACCCCATTCTAATTAATAGGAAATCAAAGAGCAAATAGTCAGTGAATTCTTTTTACTCACCCTACCCAACACAGCTTGGGAGGTCAAATGGCCCCGAAGCATATATGAACTATATTGTTGTTTATTTATTTAGTTTTATGATTAAATTGTTATAAAATTTCTAAATAGTTACCACCTCTAGTTTGGGAACTGAAGAGTCACAACTATATTGGAGGGTCAATCTCTTAGTTATATTGATTTTGAAAATTTTATTGACAATGTTGGATAACATTGTTGAGTAAGATGTGTTTTCTTTTTAGGGTTAACCGTTTGAAGCAATTGAGTTATGTTTATGTGAC

mRNA sequence

CTCCTCCATTGCCTTTTAATAAGCAGAGCTTTCCAATTTTTCATCTCATATCAATCTTTTCGGTGTTGATTATTCGCCGGCGTAATGCAGGGACGAGCCGCCGCCGCCGCCATCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGATATAGGAGCGGAGAGTGATGAGGAGGAGATAAGCAGAGTTCCGCAGATCTGCGGCAACTCCGGCTCCACCGTCGGCATTTCAGCGCCAGGTAAAGCGCCCGCATCAGATAGCGTAAGGAGCAGAGGGCGAAGTGCGGCTGAGAAAGAAAGCAAAAGGCTGAAGAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGTGTACTTAAGCGAGTTGGAAGAAAGGGCAACAAATTTGGAGAAAAGGAACTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAGAATGAGAATCAAATGCTTAGACACATACTGAAGAACACAACAACCAACAAAAAAAGTGATACCGATGCTACTAAATGCTAAGGGAAACGAAACCAAAATCGATATAGCGGTATGACAAGGTAAATTTACTCTAGTATTAGTATGTGTACATAATAACCATGTCGACTCAAAAGAAATTAAATGAATAATTAAGTATGGGGTAGGCTTTAATTTCATGTGTCGGGATAAATTATTTAACATGACTAATACAAATATTTGTTGCTTTTATATAATCATTTGATGTATGATAAAGAAACTGGAAATTTCTTAGCAGTTTAGTCTATCAAACATAGTTAAAGAGGGTAACAACTTAGTCATTATTCTTCATCAATTCGATGATTTTAACTTTTCATTGATTTCTTGATCAAAGTGTATAAGAAAAATTATTAAAATTTACTAATAGTTTTTTTCTTTATTAGAGGTTAAATTGTTTCAAACTACTAAAAAGTCGATAATTATTATAAGAGGATAGTAATTGGGAGAGGTGACTTAAATAACAAAGTAAGAAATGATTGGGCTGAATAGCTACCCCATTCTAATTAATAGGAAATCAAAGAGCAAATAGTCAGTGAATTCTTTTTACTCACCCTACCCAACACAGCTTGGGAGGTCAAATGGCCCCGAAGCATATATGAACTATATTGTTGTTTATTTATTTAGTTTTATGATTAAATTGTTATAAAATTTCTAAATAGTTACCACCTCTAGTTTGGGAACTGAAGAGTCACAACTATATTGGAGGGTCAATCTCTTAGTTATATTGATTTTGAAAATTTTATTGACAATGTTGGATAACATTGTTGAGTAAGATGTGTTTTCTTTTTAGGGTTAACCGTTTGAAGCAATTGAGTTATGTTTATGTGAC

Coding sequence (CDS)

ATGCAGGGACGAGCCGCCGCCGCCGCCATCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGATATAGGAGCGGAGAGTGATGAGGAGGAGATAAGCAGAGTTCCGCAGATCTGCGGCAACTCCGGCTCCACCGTCGGCATTTCAGCGCCAGGTAAAGCGCCCGCATCAGATAGCGTAAGGAGCAGAGGGCGAAGTGCGGCTGAGAAAGAAAGCAAAAGGCTGAAGAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGTGTACTTAAGCGAGTTGGAAGAAAGGGCAACAAATTTGGAGAAAAGGAACTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAGAATGAGAATCAAATGCTTAGACACATACTGAAGAACACAACAACCAACAAAAAAAGTGATACCGATGCTACTAAATGCTAA

Protein sequence

MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC

Homology

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BLAST of IVF0020876 vs. ExPASy Swiss-Prot
Match: O24646 (Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.9e-31
Identity = 100/160 (62.50%), Postives = 115/160 (71.88%), Query Frame = 0


Query: 1   MQGRAAAA-AISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG--------- 60
           MQ +A ++ A S + SSSERSSSSA  L++KE  G ESD EEI RVP+  G         
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKE--GIESD-EEIRRVPEFGGEAVGKETSG 60

Query: 61  -NSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSEL 120
             SGS  G     +A   +S R RGR+ AEKE+KRLKRLLRNRVSAQQARERKK YLSEL
Sbjct: 61  RESGSATG-QERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSEL 120

Query: 121 EERATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTNKK 150
           E R  +LE +NSELEE+LSTLQNENQMLRHILKNTT NK+
Sbjct: 121 ENRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKR 156

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BLAST of IVF0020876 vs. ExPASy Swiss-Prot
Match: Q9SM50 (Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.3e-30
Identity = 94/153 (61.44%), Postives = 115/153 (75.16%), Query Frame = 0


Query: 1   MQGRAAAA-AISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV--- 60
           MQ +A ++ A S + SSSERSSSSA   ++KE  G ESD +EI RVP++ G +  T    
Sbjct: 1   MQEQATSSIAASSLPSSSERSSSSALHHELKE--GMESD-DEIRRVPEMGGEATGTTSAS 60

Query: 61  ---GISAPGKA-PASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEER 120
              G+SA G+A P++ + R RGRS A+KE+KRLKRLLRNRVSAQQARERKK YL +LE R
Sbjct: 61  GRDGVSAAGQAQPSAGTQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLEAR 120

Query: 121 ATNLEKRNSELEEKLSTLQNENQMLRHILKNTT 146
              LE +N+ELEE+LSTLQNENQMLRHILKNTT
Sbjct: 121 VKELETKNAELEERLSTLQNENQMLRHILKNTT 150

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BLAST of IVF0020876 vs. ExPASy Swiss-Prot
Match: Q8W191 (Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 66/147 (44.90%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 10  ISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPG------- 69
           +S  R +   SSSS+ +    E+      +EE+  VP +   +GST  +S+         
Sbjct: 1   MSLQRPNGNSSSSSSHKKHKTEE-----SDEELLMVPDM-EAAGSTCVLSSSADDGVNNP 60

Query: 70  -----KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLE 129
                +   S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+
Sbjct: 61  ELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQ 120

Query: 130 KRNSELEEKLSTLQNENQMLRHILKNT 145
             N +LEEK+STL NEN MLR +L NT
Sbjct: 121 NNNDQLEEKISTLTNENTMLRKMLINT 141

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BLAST of IVF0020876 vs. ExPASy Swiss-Prot
Match: A2VD01 (Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Xenopus laevis OX=8355 GN=creb3l2 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.1e-04
Identity = 25/61 (40.98%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 77  AAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEKLSTLQNENQM 136
           A EK  K+++R ++N++SAQ++R +KK Y+  LE+R  N    NSEL +K+  L++ N+ 
Sbjct: 295 AEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKRVENSSSENSELRKKVEVLESTNRT 354

Query: 137 L 138
           L
Sbjct: 355 L 355

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BLAST of IVF0020876 vs. ExPASy Swiss-Prot
Match: Q1XGE2 (Transcriptional activator hacA OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=hacA PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.7e-04
Identity = 27/67 (40.30%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 71  RSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEKLSTL 130
           R R ++  EKE +R++R+LRNR +AQ +RERK++ + +LE     +E++N  L ++LS +
Sbjct: 73  RKRAKTEDEKEQRRIERVLRNRAAAQTSRERKRLEMEKLENEKIQMEQQNQFLLQRLSQM 132

Query: 131 QNENQML 138
           + EN  L
Sbjct: 133 EAENNRL 139

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BLAST of IVF0020876 vs. ExPASy TrEMBL
Match: A0A1S3CSG2 (transcription factor HY5 OS=Cucumis melo OX=3656 GN=LOC103503812 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC 158
           SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC
Sbjct: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC 157

[Close]

BLAST of IVF0020876 vs. ExPASy TrEMBL
Match: A0A0A0LJB7 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878800 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.9e-65
Identity = 149/156 (95.51%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60
           MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA
Sbjct: 1   MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEK+N
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKN 120

Query: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATK 157
           SELEEKLSTLQNENQMLRHILKNTTTNK+SD DA K
Sbjct: 121 SELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAK 156

[Close]

BLAST of IVF0020876 vs. ExPASy TrEMBL
Match: A0A5D3E623 (Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007340 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.9e-60
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHI 141
           SELEEKLSTLQNENQMLRH+
Sbjct: 121 SELEEKLSTLQNENQMLRHV 140

[Close]

BLAST of IVF0020876 vs. ExPASy TrEMBL
Match: A0A5A7T5P8 (Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003580 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHI 141
           SELEEKLSTLQNENQMLRH+
Sbjct: 121 SELEEKLSTLQNENQMLRHV 140

[Close]

BLAST of IVF0020876 vs. ExPASy TrEMBL
Match: A0A6J1IYV9 (transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480422 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48
Identity = 127/155 (81.94%), Postives = 132/155 (85.16%), Query Frame = 0


Query: 1   MQGR-AAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV-GI 60
           MQ R  A A+ SR RSSSERSSSSAF LDVKEDIG  SDEEEISRVPQICGNS S   G 
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEK 120
           SA GKAPASD VRSRGRS+A+KESKRLKRLLRNRVSAQQARERKK YL +LE RA NL K
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEEKLSTLQNENQMLRHILKNTTTNKKSDTD 154
           RNSELEE LSTLQNENQMLRHILKNTTTNK+SD D
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGD 155

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BLAST of IVF0020876 vs. NCBI nr
Match: XP_008466392.1 (PREDICTED: transcription factor HY5 [Cucumis melo])

HSP 1 Score: 268 bits (686), Expect = 6.96e-90
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC 157
           SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC
Sbjct: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC 157

[Close]

BLAST of IVF0020876 vs. NCBI nr
Match: XP_004136344.1 (transcription factor HY5 [Cucumis sativus] >KGN60111.1 hypothetical protein Csa_001769 [Cucumis sativus])

HSP 1 Score: 255 bits (651), Expect = 1.50e-84
Identity = 149/156 (95.51%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60
           MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA
Sbjct: 1   MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEK+N
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKN 120

Query: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATK 156
           SELEEKLSTLQNENQMLRHILKNTTTNK+SD DA K
Sbjct: 121 SELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAK 156

[Close]

BLAST of IVF0020876 vs. NCBI nr
Match: TYK31424.1 (transcription factor HY5 [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (606), Expect = 7.73e-78
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHI 140
           SELEEKLSTLQNENQMLRH+
Sbjct: 121 SELEEKLSTLQNENQMLRHV 140

[Close]

BLAST of IVF0020876 vs. NCBI nr
Match: KAA0038802.1 (transcription factor HY5 [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (594), Expect = 5.21e-76
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHI 140
           SELEEKLSTLQNENQMLRH+
Sbjct: 121 SELEEKLSTLQNENQMLRHV 140

[Close]

BLAST of IVF0020876 vs. NCBI nr
Match: XP_022981220.1 (transcription factor HY5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 200 bits (509), Expect = 7.72e-63
Identity = 124/149 (83.22%), Postives = 129/149 (86.58%), Query Frame = 0


Query: 6   AAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVG-ISAPGKA 65
           A A+ SR RSSSERSSSSAF LDVKEDIG  SDEEEISRVPQICGNS S  G  SA GKA
Sbjct: 7   AVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKA 66

Query: 66  PASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELE 125
           PASD VRSRGRS+A+KESKRLKRLLRNRVSAQQARERKK YL +LE RA NL KRNSELE
Sbjct: 67  PASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELE 126

Query: 126 EKLSTLQNENQMLRHILKNTTTNKKSDTD 153
           E LSTLQNENQMLRHILKNTTTNK+SD D
Sbjct: 127 ENLSTLQNENQMLRHILKNTTTNKRSDGD 155

[Close]

BLAST of IVF0020876 vs. TAIR 10
Match: AT5G11260.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-32
Identity = 100/160 (62.50%), Postives = 115/160 (71.88%), Query Frame = 0


Query: 1   MQGRAAAA-AISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG--------- 60
           MQ +A ++ A S + SSSERSSSSA  L++KE  G ESD EEI RVP+  G         
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKE--GIESD-EEIRRVPEFGGEAVGKETSG 60

Query: 61  -NSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSEL 120
             SGS  G     +A   +S R RGR+ AEKE+KRLKRLLRNRVSAQQARERKK YLSEL
Sbjct: 61  RESGSATG-QERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSEL 120

Query: 121 EERATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTNKK 150
           E R  +LE +NSELEE+LSTLQNENQMLRHILKNTT NK+
Sbjct: 121 ENRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKR 156

[Close]

BLAST of IVF0020876 vs. TAIR 10
Match: AT3G17609.1 (HY5-homolog )

HSP 1 Score: 84.7 bits (208), Expect = 7.1e-17
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 67  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEK 126
           S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK
Sbjct: 50  STAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEK 109

Query: 127 LSTLQNENQMLRHILKNT 145
           +STL NEN MLR +L NT
Sbjct: 110 ISTLTNENTMLRKMLINT 127

[Close]

BLAST of IVF0020876 vs. TAIR 10
Match: AT3G17609.3 (HY5-homolog )

HSP 1 Score: 84.7 bits (208), Expect = 7.1e-17
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 67  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEK 126
           S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK
Sbjct: 35  STAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEK 94

Query: 127 LSTLQNENQMLRHILKNT 145
           +STL NEN MLR +L NT
Sbjct: 95  ISTLTNENTMLRKMLINT 112

[Close]

BLAST of IVF0020876 vs. TAIR 10
Match: AT3G17609.4 (HY5-homolog )

HSP 1 Score: 84.7 bits (208), Expect = 7.1e-17
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 67  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEK 126
           S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK
Sbjct: 49  STAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEK 108

Query: 127 LSTLQNENQMLRHILKNT 145
           +STL NEN MLR +L NT
Sbjct: 109 ISTLTNENTMLRKMLINT 126

[Close]

BLAST of IVF0020876 vs. TAIR 10
Match: AT3G17609.2 (HY5-homolog )

HSP 1 Score: 81.3 bits (199), Expect = 7.8e-16
Identity = 66/147 (44.90%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 10  ISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPG------- 69
           +S  R +   SSSS+ +    E+      +EE+  VP +   +GST  +S+         
Sbjct: 1   MSLQRPNGNSSSSSSHKKHKTEE-----SDEELLMVPDM-EAAGSTCVLSSSADDGVNNP 60

Query: 70  -----KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLE 129
                +   S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+
Sbjct: 61  ELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQ 120

Query: 130 KRNSELEEKLSTLQNENQMLRHILKNT 145
             N +LEEK+STL NEN MLR +L NT
Sbjct: 121 NNNDQLEEKISTLTNENTMLRKMLINT 141

The following BLAST results are available for this feature:

BLAST of IVF0020876 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24646	4.9e-31	62.50	Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1	[more]
Q9SM50	9.3e-30	61.44	Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1	[more]
Q8W191	1.1e-14	44.90	Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1	[more]
A2VD01	5.1e-04	40.98	Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Xenopus laevis...	[more]
Q1XGE2	6.7e-04	40.30	Transcriptional activator hacA OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40...	[more]

BLAST of IVF0020876 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CSG2	1.6e-69	100.00	transcription factor HY5 OS=Cucumis melo OX=3656 GN=LOC103503812 PE=3 SV=1	[more]
A0A0A0LJB7	1.9e-65	95.51	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878800 PE=3 S...	[more]
A0A5D3E623	8.9e-60	99.29	Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7T5P8	2.2e-58	97.86	Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1IYV9	1.2e-48	81.94	transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of IVF0020876 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466392.1	6.96e-90	100.00	PREDICTED: transcription factor HY5 [Cucumis melo]	[more]
XP_004136344.1	1.50e-84	95.51	transcription factor HY5 [Cucumis sativus] >KGN60111.1 hypothetical protein Csa_...	[more]
TYK31424.1	7.73e-78	99.29	transcription factor HY5 [Cucumis melo var. makuwa]	[more]
KAA0038802.1	5.21e-76	97.86	transcription factor HY5 [Cucumis melo var. makuwa]	[more]
XP_022981220.1	7.72e-63	83.22	transcription factor HY5-like isoform X1 [Cucurbita maxima]	[more]

BLAST of IVF0020876 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11260.1	3.5e-32	62.50	Basic-leucine zipper (bZIP) transcription factor family protein	[more]
AT3G17609.1	7.1e-17	65.38	HY5-homolog	[more]
AT3G17609.3	7.1e-17	65.38	HY5-homolog	[more]
AT3G17609.4	7.1e-17	65.38	HY5-homolog	[more]
AT3G17609.2	7.8e-16	44.90	HY5-homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..140
None	No IPR available	PRINTS	PR00041	LEUZIPPRCREB	coord: 78..94 score: 40.0 coord: 96..116 score: 38.73 coord: 116..133 score: 40.37
None	No IPR available	GENE3D	1.20.5.490	Single helix bin	coord: 102..143 e-value: 9.6E-19 score: 69.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..101
None	No IPR available	PANTHER	PTHR46714:SF6	TRANSCRIPTIONAL ACTIVATOR HAC1	coord: 1..150
None	No IPR available	CDD	cd14704	bZIP_HY5-like	coord: 84..135 e-value: 7.07934E-18 score: 70.681
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 83..141
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 79..143 e-value: 1.7E-13 score: 60.8
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 79..140 e-value: 1.7E-12 score: 47.3
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 86..101
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 81..144 score: 12.357525
IPR044280	Transcriptional activator Hac1/HY5	PANTHER	PTHR46714	TRANSCRIPTIONAL ACTIVATOR HAC1	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020876.1	IVF0020876.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0010017	red or far-red light signaling pathway
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0010218	response to far red light
biological_process	GO:0010114	response to red light
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0003700	DNA-binding transcription factor activity