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IVF0020845 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTAGGTGACAACATAGCCAATGGGATAAATGGGGAGAATATCCGTTGAGGAACCCACCAGGGTGAATTGGAGTACTTAAATAATGTTTTGTGATTGCTGAAAATTAGGTCACATTTTTTGGAAAAAGCTGTAGAATGCTTTTATGGGAGAAGAACTAGCCTTCTTAAAATTGCTGGGGGATCCTTTCTCTTTGATTTCCTTTATTATTTGTTGTTTGTTTGCTGTATTTTTTTCTCTGTTCTTGAACAAGCATTGTGAAGACTATACTTAATTCCATTTCAATATATATTATCACATAGTACTGTCCCTGTTTTCTCTAGTCTTGTTGGTGTTTTTTGAGTGGCAGGTAGAGGAGTCCTGACAAATTGGTATCAGAGCTGCCAAAGATCCTGAGAGGATACGAACAATAGCACATAAATAATTAAAGGCAAGGATGGAGATGAGTGAGAGAGAGATCATGGGTTTGAAACAAATGATACTCGGTCTAACTAAGAGTGGAAAAACTGTCCGACAAAGTGAAAGAAAGCAGTGTGACCAAGTGACCAGAGAGAAGAATTGTGTGCGTCGGATGGGTTTGGGTTGAAACTAAAAGGTAAGGTGGAGGAAGTTGATGCGACTTCTAGCCTCGTTAAGGGTCCTCCTAATAGAAGCAAGTATAAGAAGTTGGAAATGCCCGTATTTGCCGGTGTAAACTCAAAATCATGGATTTATAAGGCAGAACATTATTTTGAGATCAATGAGCTAATTGACACGGAGGTGTAGGTGGGTGTCGTTAGTTTCGCCCAAGACGAAGTGGATTCATTTCGATGGAGCAACAATTGGAAGAAAATCACGTCGTGGGAAGACCTAAAGGGGAGGATGTTTGAACACTTTAAGGTCCCTAGAGAAGGAAGCCTGAGCGCTTGCCTCATATGCTAGCAAGATGGAATGTATACAGACTATGTGAAGAGATTTTTGAACTACTCCACACTTTTGCTGAAGATGGCAAAGAGTGTTTGGATAAATGCTTTCGTAACCGATTTAGAACCAGTGCTTCAAGTAGAGGTGAAGAGCCGCTATCCCATAACTATGAGAGAGGCCCAATTAGTGAAGGATAGAAATTTGGCTCTCAAGATGGCCCTAAATGAGTTGGGTGGCAGTGGACCGAGTATTTCAGAGGCTCAAACCCAAACTATGAAAGATGGAAGAACAAATACGAAAAAGAAAGGGGGAAGACAAACTGAGTACCCTATAAGGCAAATTTCGATTCTAGTCAAGGGAAGTTATACAAGGGGTGAGCCGCCAGTAAGATTTTTGTCAGATAATGAGTTCAAGGAAAGATTGGACAAGGGGTTATGCTTTGGTTGTAATGATAAGTACTCCCATGGGCACATATGCAAGATCAAGGAGAATCGTTACACTACAACAATTAAGAATTATTATTCTTGA ATTAGGTGACAACATAGCCAATGGGATAAATGGGGAGAATATCCGTTGAGGAACCCACCAGGGTGAATTGGAGTACTTAAATAATGTTTTGTGATTGCTGAAAATTAGGTCACATTTTTTGGAAAAAGCTGTAGAATGCTTTTATGGGAGAAGAACTAGCCTTCTTAAAATTGCTGGGGGATCCTTTCTCTTTGATTTCCTTTATTATTTGTTGTTTGTTTGCTGTATTTTTTTCTCTGTTCTTGAACAAGCATTGTGAAGACTATACTTAATTCCATTTCAATATATATTATCACATAGTACTGTCCCTGTTTTCTCTAGTCTTGTTGGTGTTTTTTGAGTGGCAGGTAGAGGAGTCCTGACAAATTGGTATCAGAGCTGCCAAAGATCCTGAGAGGATACGAACAATAGCACATAAATAATTAAAGGCAAGGATGGAGATGAGTGAGAGAGAGATCATGGGTTTGAAACAAATGATACTCGGTCTAACTAAGAGTGGAAAAACTGTCCGACAAAGTGAAAGAAAGCAGTGTGACCAAGTGACCAGAGAGAAGAATTGTGTGCGTCGGATGGGTTTGGGTTGAAACTAAAAGGTAAGGTGGAGGAAGTTGATGCGACTTCTAGCCTCGTTAAGGGTCCTCCTAATAGAAGCAAGTATAAGAAGTTGGAAATGCCCGTATTTGCCGGTGTAAACTCAAAATCATGGATTTATAAGGCAGAACATTATTTTGAGATCAATGAGCTAATTGACACGGAGGTGTAGGTGGGTGTCGTTAGTTTCGCCCAAGACGAAGTGGATTCATTTCGATGGAGCAACAATTGGAAGAAAATCACGTCGTGGGAAGACCTAAAGGGGAGGATGTTTGAACACTTTAAGGTCCCTAGAGAAGGAAGCCTGAGCGCTTGCCTCATATGCTAGCAAGATGGAATGTATACAGACTATGTGAAGAGATTTTTGAACTACTCCACACTTTTGCTGAAGATGGCAAAGAGTGTTTGGATAAATGCTTTCGTAACCGATTTAGAACCAGTGCTTCAAGTAGAGGTGAAGAGCCGCTATCCCATAACTATGAGAGAGGCCCAATTAGTGAAGGATAGAAATTTGGCTCTCAAGATGGCCCTAAATGAGTTGGGTGGCAGTGGACCGAGTATTTCAGAGGCTCAAACCCAAACTATGAAAGATGGAAGAACAAATACGAAAAAGAAAGGGGGAAGACAAACTGAGTACCCTATAAGGCAAATTTCGATTCTAGTCAAGGGAAGTTATACAAGGGGTGAGCCGCCAGTAAGATTTTTGTCAGATAATGAGTTCAAGGAAAGATTGGACAAGGGGTTATGCTTTGGTTGTAATGATAAGTACTCCCATGGGCACATATGCAAGATCAAGGAGAATCGTTACACTACAACAATTAAGAATTATTATTCTTGA ATGTATACAGACTATGTGAAGAGATTTTTGAACTACTCCACACTTTTGCTGAAGATGGCAAAGAGTGTTTGGATAAATGCTTTCGTAACCGATTTAGAACCAGTGCTTCAAGTAGAGGTGAAGAGCCGCTATCCCATAACTATGAGAGAGGCCCAATTAGTGAAGGATAGAAATTTGGCTCTCAAGATGGCCCTAAATGAGTTGGGTGGCAGTGGACCGAGTATTTCAGAGGCTCAAACCCAAACTATGAAAGATGGAAGAACAAATACGAAAAAGAAAGGGGGAAGACAAACTGAGTACCCTATAAGGCAAATTTCGATTCTAGTCAAGGGAAGTTATACAAGGGGTGAGCCGCCAGTAAGATTTTTGTCAGATAATGAGTTCAAGGAAAGATTGGACAAGGGGTTATGCTTTGGTTGTAATGATAAGTACTCCCATGGGCACATATGCAAGATCAAGGAGAATCGTTACACTACAACAATTAAGAATTATTATTCTTGA MYTDYVKRFLNYSTLLLKMAKSVWINAFVTDLEPVLQVEVKSRYPITMREAQLVKDRNLALKMALNELGGSGPSISEAQTQTMKDGRTNTKKKGGRQTEYPIRQISILVKGSYTRGEPPVRFLSDNEFKERLDKGLCFGCNDKYSHGHICKIKENRYTTTIKNYYS Homology
BLAST of IVF0020845 vs. ExPASy TrEMBL
Match: A0A5A7UI53 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00410 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of IVF0020845 vs. ExPASy TrEMBL
Match: A0A5D3DDB3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold518G00030 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 5.6e-44 Identity = 97/143 (67.83%), Postives = 116/143 (81.12%), Query Frame = 0
BLAST of IVF0020845 vs. ExPASy TrEMBL
Match: A0A5D3DGC7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00940 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37 Identity = 87/160 (54.37%), Postives = 114/160 (71.25%), Query Frame = 0
BLAST of IVF0020845 vs. ExPASy TrEMBL
Match: A0A5D3DUJ0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001340 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 6.6e-37 Identity = 84/161 (52.17%), Postives = 117/161 (72.67%), Query Frame = 0
BLAST of IVF0020845 vs. ExPASy TrEMBL
Match: A0A5A7V4D8 (Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00260 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 6.6e-37 Identity = 84/161 (52.17%), Postives = 117/161 (72.67%), Query Frame = 0
BLAST of IVF0020845 vs. NCBI nr
Match: KAA0054834.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK27774.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 301 bits (772), Expect = 5.68e-103 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of IVF0020845 vs. NCBI nr
Match: KAA0061430.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK21508.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 187 bits (476), Expect = 2.23e-57 Identity = 97/143 (67.83%), Postives = 116/143 (81.12%), Query Frame = 0
BLAST of IVF0020845 vs. NCBI nr
Match: TYK22652.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 164 bits (416), Expect = 4.54e-45 Identity = 87/160 (54.37%), Postives = 114/160 (71.25%), Query Frame = 0
BLAST of IVF0020845 vs. NCBI nr
Match: KAA0063363.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK28065.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 162 bits (410), Expect = 8.33e-45 Identity = 90/159 (56.60%), Postives = 110/159 (69.18%), Query Frame = 0
BLAST of IVF0020845 vs. NCBI nr
Match: KAA0061436.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 160 bits (406), Expect = 5.87e-43 Identity = 89/159 (55.97%), Postives = 110/159 (69.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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