IVF0020841 (gene) Melon (IVF77) v1

Overview


Name	IVF0020841
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	myb-related protein Myb4-like
Location	chr04: 13416060 .. 13418011 (-)
RNA-Seq Expression	IVF0020841
Synteny	IVF0020841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGAGCTCCATGTTGTGAGAAAATGGGGCTCAAGAAAGGCCCTTGGACTCCTGAAGAAGATCAGATTCTCATCAATTATATTAACCTCTATGGCCATGGAAATTGGAGAGCCCTCCCTAAACAAGCTGGTAATCATCATCGTAGTCCTATATCTTTTAACTTCTTCGTTTCTTGCTAGAGTTTCCTCTACAGTGTGTATTTATAAAATCTTCCCTTTTCTTTTTCTTTCTTTAAATGAGTTGAGATGTTTTTTTCATCATAATATATTTTTTGGTTTTATCAGGTTTATTAAGGTGTGGAAAAAGTTGTAGACTTCGATGGACAAATTACCTAAGACCAGACATTAAACGAGGAAATTTCACCCCAGAAGAAGAGGAGACCATTATTAATCTACATGAAATGCTTGGAAACAGGTTTTTGTTCCATCACTCTTTGTTCTTTTTTGGTCTCCAAACCATTTATTAGCGTCCATCTTAACTTCAGTCAATAAATGTATAATTGATTGTATTGCATCTAATTAGTGTCTAATAACAATTTGCCTCATGGAAATTTTCTTTCATATAATTGTTCGAAAAATATTTATGTGTAAAGATGAGTGGAACTATCCATAATGCACCCAATATAATATTATTGTTCTAAAATTTAAAAGCTTATCACAACAATTTTTTTTTCATTAAGTTATATATTAACGATCCAAAATAATATTCAGAATCTTTCCCTCCCTCGACTTTCTGATGGGAGGGCCAAAATATTCATTTATCTTCCACATCAAAAGGTGTTCAAAGAGTTTAATTTTTTGTATTATAATTATATTTAAGCACTTTTTTTTTATATTAGTAGAGAGGAATGAAATCGATATATTCGAATTTTATATTTAAATATTATTACATGTTCATGATGGTTCAATTTGTCTAAATATGAAATTATTGAATATCGATTGTCTCTTTGAATTTCATCCATCTTTATCTAATTTACTTCGATTAAATAAAAAATTCAAAACGAAGAAACATGAACACATTAAAAGTTTATATATTCTTTTGAACTTTTGGACATAAATTCGTAATATATATAAACAATTTAAGACTTTTTCACATTATTGTTTCATAATTTCCCAACTTATTACACTCACGTGACTCTGATTTCCTCGAGAAAGGCTATAGGTTTTAACCATTTGCTAATTAATTAGTTATCATGTCGATTAGTGCATTGTCTTCTAATCCATTTGATGTCATCATGTGACACTAAAAACAAAACTAGCAAATATTGAAATTAACAAACATCTTTTTTGAACCCATATATAATTAAAAAGTCTAATGCTTTTATTTTATGTAATCTGTCTTGTGTCATTTTATACCATTTACCTATTTTCAGTTTTTACTTATATGCTGGAGTGAGAGGTAGAACAAAGAACACATCTTTATATTATTTTTTCTCAAAAGAAAAAACTAAAATTTGTTTTTGATTTTTAGATGGTCCACAATTGCTGCAAGATTACCAGGAAGAACAGATAATGAGATTAAAAACGTATGGCACACCCATTTGAAGAAAAGACTAAGACAAAAGTACGCCACCCCACAACTCAGAAACTACCCCGCCATGAATGAAGAACAATCTATAGCACAAGAACCCTTCAAATATACGACCTATGAATCGATGGGGAGCTCTGCTTTGGCTTTTTCACCACCTCATTGCTCAAGCGAAAGCTCCTCCAACATCACGGGGGAGAACGGTGAGTGGTGGACGAATAATCTACCGGAGGCGGATGAGAATTTTTGGAGGGAAGTTTTGGGGAGCGACCAACAAATGGCGACGGTGGGAAACCAACAAGGATTTGGAGGTCAAACTAGTGAAGGTCAATTTGGTATTTTTACAAAGGAGCAGCCAATTCAAGAGACTACGGATTTTTGGACAATATTTTTGCAAGAGGAGGGGATTTATCTGAGTTGA

mRNA sequence

ATGGTGAGAGCTCCATGTTGTGAGAAAATGGGGCTCAAGAAAGGCCCTTGGACTCCTGAAGAAGATCAGATTCTCATCAATTATATTAACCTCTATGGCCATGGAAATTGGAGAGCCCTCCCTAAACAAGCTGGTTTATTAAGGTGTGGAAAAAGTTGTAGACTTCGATGGACAAATTACCTAAGACCAGACATTAAACGAGGAAATTTCACCCCAGAAGAAGAGGAGACCATTATTAATCTACATGAAATGCTTGGAAACAGCGAAAGCTCCTCCAACATCACGGGGGAGAACGGTGAGTGGTGGACGAATAATCTACCGGAGGCGGATGAGAATTTTTGGAGGGAAGTTTTGGGGAGCGACCAACAAATGGCGACGGTGGGAAACCAACAAGGATTTGGAGGTCAAACTAGTGAAGGTCAATTTGGTATTTTTACAAAGGAGCAGCCAATTCAAGAGACTACGGATTTTTGGACAATATTTTTGCAAGAGGAGGGGATTTATCTGAGTTGA

Coding sequence (CDS)

ATGGTGAGAGCTCCATGTTGTGAGAAAATGGGGCTCAAGAAAGGCCCTTGGACTCCTGAAGAAGATCAGATTCTCATCAATTATATTAACCTCTATGGCCATGGAAATTGGAGAGCCCTCCCTAAACAAGCTGGTTTATTAAGGTGTGGAAAAAGTTGTAGACTTCGATGGACAAATTACCTAAGACCAGACATTAAACGAGGAAATTTCACCCCAGAAGAAGAGGAGACCATTATTAATCTACATGAAATGCTTGGAAACAGCGAAAGCTCCTCCAACATCACGGGGGAGAACGGTGAGTGGTGGACGAATAATCTACCGGAGGCGGATGAGAATTTTTGGAGGGAAGTTTTGGGGAGCGACCAACAAATGGCGACGGTGGGAAACCAACAAGGATTTGGAGGTCAAACTAGTGAAGGTCAATTTGGTATTTTTACAAAGGAGCAGCCAATTCAAGAGACTACGGATTTTTGGACAATATTTTTGCAAGAGGAGGGGATTTATCTGAGTTGA

Protein sequence

MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTPEEEETIINLHEMLGNSESSSNITGENGEWWTNNLPEADENFWREVLGSDQQMATVGNQQGFGGQTSEGQFGIFTKEQPIQETTDFWTIFLQEEGIYLS

Homology

[Close]

BLAST of IVF0020841 vs. ExPASy Swiss-Prot
Match: Q9SJX8 (Transcription factor MYB14 OS=Arabidopsis thaliana OX=3702 GN=MYB14 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.2e-44
Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M RAPCCEKMG+K+GPWTPEEDQILINYI+LYGH NWRALPK AGLLRCGKSCRLRW NY
Sbjct: 1  MGRAPCCEKMGVKRGPWTPEEDQILINYIHLYGHSNWRALPKHAGLLRCGKSCRLRWINY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          LRPDIKRGNFTP+EE+TIINLHE LGN  S+
Sbjct: 61 LRPDIKRGNFTPQEEQTIINLHESLGNRWSA 91

[Close]

BLAST of IVF0020841 vs. ExPASy Swiss-Prot
Match: Q7XBH4 (Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 3.3e-41
Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M RAPCCEKMGLKKGPWTPEED++L+ +I  +GHGNWRALPKQAGLLRCGKSCRLRW NY
Sbjct: 1  MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          LRPDIKRGNF+ EEE+TII+LHE+LGN  S+
Sbjct: 61 LRPDIKRGNFSKEEEDTIIHLHELLGNRWSA 91

[Close]

BLAST of IVF0020841 vs. ExPASy Swiss-Prot
Match: Q9LNC9 (Transcription factor MYB13 OS=Arabidopsis thaliana OX=3702 GN=MYB13 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.8e-40
Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M R PCCEK+GLKKGPW+ EED+ILINYI+L+GH NWRALPK AGLLRCGKSCRLRW NY
Sbjct: 1  MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          LRPDIKRGNFTP EE+TII+LH++LGN  S+
Sbjct: 61 LRPDIKRGNFTPHEEDTIISLHQLLGNRWSA 91

[Close]

BLAST of IVF0020841 vs. ExPASy Swiss-Prot
Match: Q9LTC4 (Transcription factor MYB15 OS=Arabidopsis thaliana OX=3702 GN=MYB15 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.2e-40
Identity = 71/91 (78.02%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M RAPCCEKMGLK+GPWTPEEDQIL+++I  +GH NWRALPKQAGLLRCGKSCRLRW NY
Sbjct: 1  MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          L+PDIKRGNFT EEE+ II+LH++LGN  S+
Sbjct: 61 LKPDIKRGNFTKEEEDAIISLHQILGNRWSA 91

[Close]

BLAST of IVF0020841 vs. ExPASy Swiss-Prot
Match: Q6K1S6 (Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-38
Identity = 69/91 (75.82%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M RAPCCEKMGLK+GPWT EED+IL+ +I  +GH NWRALP+QAGLLRCGKSCRLRW NY
Sbjct: 1  MGRAPCCEKMGLKRGPWTAEEDRILVAHIERHGHSNWRALPRQAGLLRCGKSCRLRWINY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          LRPDIKRGNFT EEE+ II+LH++LGN  S+
Sbjct: 61 LRPDIKRGNFTREEEDAIIHLHDLLGNRWSA 91

[Close]

BLAST of IVF0020841 vs. ExPASy TrEMBL
Match: A0A5D3DAL2 (Myb-related protein Myb4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001260 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 170/246 (69.11%), Postives = 170/246 (69.11%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGN--------------------------------- 120
           LRPDIKRGNFTPEEEETIINLHEMLGN                                 
Sbjct: 61  LRPDIKRGNFTPEEEETIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLRQKY 120

Query: 121 -------------------------------------------SESSSNITGENGEWWTN 171
                                                      SESSSNITGENGEWWTN
Sbjct: 121 ATPQLRNYPAMNEEQSIAQEPFKYTTYESMGSSALAFSPPHCSSESSSNITGENGEWWTN 180

[Close]

BLAST of IVF0020841 vs. ExPASy TrEMBL
Match: A0A1S3BI17 (myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103489876 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 170/246 (69.11%), Postives = 170/246 (69.11%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGN--------------------------------- 120
           LRPDIKRGNFTPEEEETIINLHEMLGN                                 
Sbjct: 61  LRPDIKRGNFTPEEEETIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLRQKY 120

Query: 121 -------------------------------------------SESSSNITGENGEWWTN 171
                                                      SESSSNITGENGEWWTN
Sbjct: 121 ATPQLRNYPAMNEEQSIAQEPFKYTTYESMGSSALAFSPPHCSSESSSNITGENGEWWTN 180

[Close]

BLAST of IVF0020841 vs. ExPASy TrEMBL
Match: A0A0A0L7F4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G386830 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-84
Identity = 153/170 (90.00%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           MVRAPCCEKMGLKKGPWTPEEDQ LINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDQTLINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGNSESSSNITGENGEWWTNNLPEADENFWREVLGS 120
           LRPDIKRGNFT EEEETIINLH+MLGNSESSS IT ENGE WTNNLPEADENFWREVLGS
Sbjct: 61  LRPDIKRGNFTAEEEETIINLHQMLGNSESSSIITAENGESWTNNLPEADENFWREVLGS 120

Query: 121 DQQMATVGNQQGFGGQTSEGQFGIFTKEQPIQETTDFWTIFLQEEGIYLS 171
           D QMATVGNQQGF G+TSE Q G  T EQP  ETTDFWTIF QEEGIYLS
Sbjct: 121 D-QMATVGNQQGFEGETSERQLGNLTNEQPTHETTDFWTIFFQEEGIYLS 169

[Close]

BLAST of IVF0020841 vs. ExPASy TrEMBL
Match: A0A5A7T791 (Myb-related protein Myb4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002720 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.0e-82
Identity = 161/237 (67.93%), Postives = 161/237 (67.93%), Query Frame = 0


Query: 10  MGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGN 69
           MGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGN
Sbjct: 1   MGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGN 60

Query: 70  FTPEEEETIINLHEMLGN------------------------------------------ 129
           FTPEEEETIINLHEMLGN                                          
Sbjct: 61  FTPEEEETIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLRQKYATPQLRNYP 120

Query: 130 ----------------------------------SESSSNITGENGEWWTNNLPEADENF 171
                                             SESSSNITGENGEWWTNNLPEADENF
Sbjct: 121 AMNEEQSIAQEPFKYTTYESMGSSALAFSPPHCSSESSSNITGENGEWWTNNLPEADENF 180

[Close]

BLAST of IVF0020841 vs. ExPASy TrEMBL
Match: A0A6J1ESE7 (transcription factor MYB14-like OS=Cucurbita moschata OX=3662 GN=LOC111437307 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.2e-59
Identity = 128/245 (52.24%), Postives = 139/245 (56.73%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           MVR PCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRGPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGN--------------------------------- 120
           LRPDIKRGNFT +EEETII LH+MLGN                                 
Sbjct: 61  LRPDIKRGNFTQQEEETIIKLHQMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRITQNS 120

Query: 121 ------------------------------------------------------SESSSN 159
                                                                 SESSS 
Sbjct: 121 ATPQLRNYSAMNRQSYGGDIPAVAGEESAAQSYKFTTFHSMQSCGSASSPPHCSSESSSV 180

[Close]

BLAST of IVF0020841 vs. NCBI nr
Match: XP_008447428.1 (PREDICTED: myb-related protein Myb4-like [Cucumis melo] >TYK20539.1 myb-related protein Myb4-like [Cucumis melo var. makuwa])

HSP 1 Score: 333 bits (855), Expect = 4.51e-114
Identity = 170/246 (69.11%), Postives = 170/246 (69.11%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGN--------------------------------- 120
           LRPDIKRGNFTPEEEETIINLHEMLGN                                 
Sbjct: 61  LRPDIKRGNFTPEEEETIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLRQKY 120

Query: 121 -------------------------------------------SESSSNITGENGEWWTN 170
                                                      SESSSNITGENGEWWTN
Sbjct: 121 ATPQLRNYPAMNEEQSIAQEPFKYTTYESMGSSALAFSPPHCSSESSSNITGENGEWWTN 180

[Close]

BLAST of IVF0020841 vs. NCBI nr
Match: KAA0038066.1 (myb-related protein Myb4-like [Cucumis melo var. makuwa])

HSP 1 Score: 313 bits (801), Expect = 5.53e-106
Identity = 161/237 (67.93%), Postives = 161/237 (67.93%), Query Frame = 0


Query: 10  MGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGN 69
           MGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGN
Sbjct: 1   MGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGN 60

Query: 70  FTPEEEETIINLHEMLGN------------------------------------------ 129
           FTPEEEETIINLHEMLGN                                          
Sbjct: 61  FTPEEEETIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLRQKYATPQLRNYP 120

Query: 130 ----------------------------------SESSSNITGENGEWWTNNLPEADENF 170
                                             SESSSNITGENGEWWTNNLPEADENF
Sbjct: 121 AMNEEQSIAQEPFKYTTYESMGSSALAFSPPHCSSESSSNITGENGEWWTNNLPEADENF 180

[Close]

BLAST of IVF0020841 vs. NCBI nr
Match: XP_004151985.1 (transcription factor MYB4 [Cucumis sativus] >KAE8650660.1 hypothetical protein Csa_011635 [Cucumis sativus])

HSP 1 Score: 288 bits (736), Expect = 5.71e-96
Identity = 153/246 (62.20%), Postives = 155/246 (63.01%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           MVRAPCCEKMGLKKGPWTPEEDQ LINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDQTLINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGN--------------------------------- 120
           LRPDIKRGNFT EEEETIINLH+MLGN                                 
Sbjct: 61  LRPDIKRGNFTAEEEETIINLHQMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLRQNY 120

Query: 121 -------------------------------------------SESSSNITGENGEWWTN 170
                                                      SESSS IT ENGE WTN
Sbjct: 121 ATPQLRNYPVMNEEESIAQQPFKYTNYGSMPSSALAFSPPHCSSESSSIITAENGESWTN 180

[Close]

BLAST of IVF0020841 vs. NCBI nr
Match: XP_038887475.1 (transcription factor MYB4-like [Benincasa hispida])

HSP 1 Score: 256 bits (654), Expect = 2.50e-83
Identity = 138/241 (57.26%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           MVRAPCCEKMGLKKGPWTPEED ILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDHILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGN--------------------------------- 120
           LRPDIKRGN T EEEETIINLHEMLGN                                 
Sbjct: 61  LRPDIKRGNLTKEEEETIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKLRQNY 120

Query: 121 --------------------------------------------------SESSSNITGE 158
                                                             SESSS +T E
Sbjct: 121 FTPQLESYAAVNRPICGGDKEEFIVQQPFKFTTFQPMQASASASSPPHCSSESSSIVTAE 180

[Close]

BLAST of IVF0020841 vs. NCBI nr
Match: KAG7036317.1 (Transcription factor MYB14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236 bits (602), Expect = 2.25e-75
Identity = 128/245 (52.24%), Postives = 139/245 (56.73%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           MVR PCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRGPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGN--------------------------------- 120
           LRPDIKRGNFT +EEETII LH+MLGN                                 
Sbjct: 61  LRPDIKRGNFTQQEEETIIKLHQMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRITQNS 120

Query: 121 ------------------------------------------------------SESSSN 158
                                                                 SESSS 
Sbjct: 121 ATPQLRNYSAMNRQSYGGDIPAVAGEESAAQSYKFTTFHSMQSCGSASSPPHCSSESSSV 180

[Close]

BLAST of IVF0020841 vs. TAIR 10
Match: AT2G31180.1 (myb domain protein 14 )

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-45
Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M RAPCCEKMG+K+GPWTPEEDQILINYI+LYGH NWRALPK AGLLRCGKSCRLRW NY
Sbjct: 1  MGRAPCCEKMGVKRGPWTPEEDQILINYIHLYGHSNWRALPKHAGLLRCGKSCRLRWINY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          LRPDIKRGNFTP+EE+TIINLHE LGN  S+
Sbjct: 61 LRPDIKRGNFTPQEEQTIINLHESLGNRWSA 91

[Close]

BLAST of IVF0020841 vs. TAIR 10
Match: AT3G02940.1 (myb domain protein 107 )

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-41
Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M R+PCC++ GLKKGPWTPEEDQ LIN+I  +GHG+WRALPKQAGL RCGKSCRLRWTNY
Sbjct: 1  MGRSPCCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTNY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          LRPDIKRGNFT EEE+TIINLH +LGN  SS
Sbjct: 61 LRPDIKRGNFTAEEEQTIINLHSLLGNKWSS 91

[Close]

BLAST of IVF0020841 vs. TAIR 10
Match: AT1G06180.1 (myb domain protein 13 )

HSP 1 Score: 165.6 bits (418), Expect = 3.4e-41
Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M R PCCEK+GLKKGPW+ EED+ILINYI+L+GH NWRALPK AGLLRCGKSCRLRW NY
Sbjct: 1  MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          LRPDIKRGNFTP EE+TII+LH++LGN  S+
Sbjct: 61 LRPDIKRGNFTPHEEDTIISLHQLLGNRWSA 91

[Close]

BLAST of IVF0020841 vs. TAIR 10
Match: AT3G23250.1 (myb domain protein 15 )

HSP 1 Score: 164.9 bits (416), Expect = 5.8e-41
Identity = 71/91 (78.02%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
          M RAPCCEKMGLK+GPWTPEEDQIL+++I  +GH NWRALPKQAGLLRCGKSCRLRW NY
Sbjct: 1  MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGLLRCGKSCRLRWMNY 60

Query: 61 LRPDIKRGNFTPEEEETIINLHEMLGNSESS 92
          L+PDIKRGNFT EEE+ II+LH++LGN  S+
Sbjct: 61 LKPDIKRGNFTKEEEDAIISLHQILGNRWSA 91

[Close]

BLAST of IVF0020841 vs. TAIR 10
Match: AT5G16770.1 (myb domain protein 9 )

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-39
Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 1   MVRAPCCEKMGLKKGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNY 60
           M R+PCC++ GLKKGPWT EED  LI++I  +GHG+WRALPKQAGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDENGLKKGPWTQEEDDKLIDHIQKHGHGSWRALPKQAGLNRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGNFTPEEEETIINLHEMLGNSESS--SNITG----ENGEWWTNNL 107
           LRPDIKRGNFT EEE+TIINLH +LGN  SS   N+ G    E   +W  +L
Sbjct: 61  LRPDIKRGNFTEEEEQTIINLHSLLGNKWSSIAGNLPGRTDNEIKNYWNTHL 112

The following BLAST results are available for this feature:

BLAST of IVF0020841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJX8	4.2e-44	85.71	Transcription factor MYB14 OS=Arabidopsis thaliana OX=3702 GN=MYB14 PE=2 SV=1	[more]
Q7XBH4	3.3e-41	80.22	Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 ...	[more]
Q9LNC9	4.8e-40	79.12	Transcription factor MYB13 OS=Arabidopsis thaliana OX=3702 GN=MYB13 PE=1 SV=1	[more]
Q9LTC4	8.2e-40	78.02	Transcription factor MYB15 OS=Arabidopsis thaliana OX=3702 GN=MYB15 PE=1 SV=1	[more]
Q6K1S6	2.0e-38	75.82	Transcription factor MYB30 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB30 PE=...	[more]

BLAST of IVF0020841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DAL2	3.8e-88	69.11	Myb-related protein Myb4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BI17	3.8e-88	69.11	myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103489876 PE=4 SV=1	[more]
A0A0A0L7F4	1.9e-84	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G386830 PE=4 SV=1	[more]
A0A5A7T791	9.0e-82	67.93	Myb-related protein Myb4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1ESE7	8.2e-59	52.24	transcription factor MYB14-like OS=Cucurbita moschata OX=3662 GN=LOC111437307 PE...	[more]

BLAST of IVF0020841 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447428.1	4.51e-114	69.11	PREDICTED: myb-related protein Myb4-like [Cucumis melo] >TYK20539.1 myb-related ...	[more]
KAA0038066.1	5.53e-106	67.93	myb-related protein Myb4-like [Cucumis melo var. makuwa]	[more]
XP_004151985.1	5.71e-96	62.20	transcription factor MYB4 [Cucumis sativus] >KAE8650660.1 hypothetical protein C...	[more]
XP_038887475.1	2.50e-83	57.26	transcription factor MYB4-like [Benincasa hispida]	[more]
KAG7036317.1	2.25e-75	52.24	Transcription factor MYB14, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0020841 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31180.1	3.0e-45	85.71	myb domain protein 14	[more]
AT3G02940.1	1.5e-41	80.22	myb domain protein 107	[more]
AT1G06180.1	3.4e-41	79.12	myb domain protein 13	[more]
AT3G23250.1	5.8e-41	78.02	myb domain protein 15	[more]
AT5G16770.1	2.5e-39	66.96	myb domain protein 9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..108 e-value: 33.0 score: 4.1 coord: 13..63 e-value: 2.1E-15 score: 67.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 11.567358
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 2.13965E-12 score: 56.815
None	No IPR available	GENE3D	1.10.10.60		coord: 11..67 e-value: 6.8E-21 score: 76.0
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 1..119
None	No IPR available	PANTHER	PTHR10641:SF1129	TRANSCRIPTION FACTOR MYB14	coord: 1..119
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 1.0E-15 score: 57.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..65 score: 24.324163
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020841.2	IVF0020841.2	mRNA