IVF0020730 (gene) Melon (IVF77) v1

Overview


Name	IVF0020730
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrotransposon protein
Location	chr06: 23215930 .. 23216675 (-)
RNA-Seq Expression	IVF0020730
Synteny	IVF0020730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGACGATTGGGTAAAGGTGCGTTACTAGATATTTGAACACTTGTTTGATTATTTGAATACATGGACTAATAATTTATTATTGCACTTATACAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGTAAAGATCGTGCAACAGGAGGTCGGGCTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTCCTGGGTATGACGCATTTGCTGCTGATGCTGTGCCAGATACGGACTTTCCGCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGAGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTATGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATTCTACAACGTCAAGATGCTACCCAAACACGTCAAGACATTGTTCGACAGTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAATCGATGA

mRNA sequence

ATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGACGATTGGGTAAAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGTAAAGATCGTGCAACAGGAGGTCGGGCTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTCCTGGGTATGACGCATTTGCTGCTGATGCTGTGCCAGATACGGACTTTCCGCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAATCGATGA

Coding sequence (CDS)

ATGCGTGGCCCAAACTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAATGCATCGTCGCAGAGAAAGAAGTCTTTGACGATTGGGTAAAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACGTGTTTGGTAAAGATCGTGCAACAGGAGGTCGGGCTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTCCTGGGTATGACGCATTTGCTGCTGATGCTGTGCCAGATACGGACTTTCCGCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAATCGATGA

Protein sequence

MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYPYCSIILQENR

Homology

[Close]

BLAST of IVF0020730 vs. ExPASy TrEMBL
Match: A0A5A7VF53 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00250 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 163/222 (73.42%), Postives = 163/222 (73.42%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MRGPNCSGFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 79  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 138

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 139 GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 198

Query: 121 -------------------------------------------------------AIPEL 166
                                                                  AIPEL
Sbjct: 199 SESKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQDIVRQLEAIPEL 258

[Close]

BLAST of IVF0020730 vs. ExPASy TrEMBL
Match: A0A5A7U4M2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00330 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.3e-80
Identity = 158/222 (71.17%), Postives = 161/222 (72.52%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MR PNCSGFGWNDEKKCI+AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 33  MRDPNCSGFGWNDEKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 92

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDP GYDAFAAD V DTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 93  GRAESFADIGSNDPAGYDAFAADTVLDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 152

Query: 121 -------------------------------------------------------AIPEL 166
                                                                  AIPEL
Sbjct: 153 SGSKWKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPEL 212

[Close]

BLAST of IVF0020730 vs. ExPASy TrEMBL
Match: A0A5D3DPR5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00580 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.1e-79
Identity = 158/222 (71.17%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MRGPNCSGFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 83  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 142

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDPPGYDA AADA+PDTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 143 GRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 202

Query: 121 -------------------------------------------------------AIPEL 166
                                                                  AIPEL
Sbjct: 203 SGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPEL 262

[Close]

BLAST of IVF0020730 vs. ExPASy TrEMBL
Match: A0A5A7TXU5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00810 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.1e-79
Identity = 158/222 (71.17%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MRGPNCSGFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 79  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 138

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDPPGYDA AADA+PDTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 139 GRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 198

Query: 121 -------------------------------------------------------AIPEL 166
                                                                  AIPEL
Sbjct: 199 SGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPEL 258

[Close]

BLAST of IVF0020730 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.9e-79
Identity = 158/222 (71.17%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MRGPNCSGFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 83  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 142

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDPPGYDA AADA+PDTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 143 GRAESFADIGSNDPPGYDAEAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 202

Query: 121 -------------------------------------------------------AIPEL 166
                                                                  AIPEL
Sbjct: 203 SGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPEL 262

[Close]

BLAST of IVF0020730 vs. NCBI nr
Match: KAA0065737.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 306 bits (785), Expect = 9.73e-103
Identity = 163/222 (73.42%), Postives = 163/222 (73.42%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MRGPNCSGFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 79  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 138

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 139 GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 198

Query: 121 -------------------------------------------------------AIPEL 165
                                                                  AIPEL
Sbjct: 199 SESKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQDIVRQLEAIPEL 258

[Close]

BLAST of IVF0020730 vs. NCBI nr
Match: KAA0050782.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 301 bits (771), Expect = 2.98e-101
Identity = 158/222 (71.17%), Postives = 161/222 (72.52%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MR PNCSGFGWNDEKKCI+AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 33  MRDPNCSGFGWNDEKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 92

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDP GYDAFAAD V DTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 93  GRAESFADIGSNDPAGYDAFAADTVLDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 152

Query: 121 -------------------------------------------------------AIPEL 165
                                                                  AIPEL
Sbjct: 153 SGSKWKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRQLEAIPEL 212

[Close]

BLAST of IVF0020730 vs. NCBI nr
Match: KAA0048362.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (764), Expect = 1.52e-99
Identity = 158/222 (71.17%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MRGPNCSGFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 79  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 138

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDPPGYDA AADA+PDTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 139 GRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 198

Query: 121 -------------------------------------------------------AIPEL 165
                                                                  AIPEL
Sbjct: 199 SGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPEL 258

[Close]

BLAST of IVF0020730 vs. NCBI nr
Match: KAA0035621.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046728.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0052099.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0054495.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (764), Expect = 1.73e-99
Identity = 158/222 (71.17%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MRGPNCSGFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 83  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 142

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDPPGYDA AADA+PDTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 143 GRAESFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 202

Query: 121 -------------------------------------------------------AIPEL 165
                                                                  AIPEL
Sbjct: 203 SGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPEL 262

[Close]

BLAST of IVF0020730 vs. NCBI nr
Match: KAA0038122.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0055248.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97185.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK00369.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (762), Expect = 3.48e-99
Identity = 158/222 (71.17%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 1   MRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATG 60
           MRGPNCSGFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATG
Sbjct: 83  MRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATG 142

Query: 61  GRAESFADIGSNDPPGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN-- 120
           GRAESFADIGSNDPPGYDA AADA+PDTDFPPMYSPGLNMSPDDLMETRTARVSERRN  
Sbjct: 143 GRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVS 202

Query: 121 -------------------------------------------------------AIPEL 165
                                                                  AIPEL
Sbjct: 203 SGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPEL 262

[Close]

BLAST of IVF0020730 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 6.3e-08
Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 7   SGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESF 66
           SGFGW+ E K   A  EV+ D++K+HP  K +  +S  H+++L  +FG   ATG  A   
Sbjct: 88  SGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDHFEDLQIIFGDVVATGSFAVGM 147

Query: 67  AD 69
           +D
Sbjct: 148 SD 149

[Close]

BLAST of IVF0020730 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 5.5e-04
Identity = 18/61 (29.51%), Postives = 34/61 (55.74%), Query Frame = 0


Query: 8   GFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFA 67
           GF W+D ++ +VA+  V+D+++K HP ++    KS   Y +L  V+    +     ES +
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVYSDGMSEHKAEESIS 147

Query: 68  D 69
           +
Sbjct: 148 E 148

[Close]

BLAST of IVF0020730 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 42.0 bits (97), Expect = 5.5e-04
Identity = 18/61 (29.51%), Postives = 34/61 (55.74%), Query Frame = 0


Query: 8   GFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFA 67
           GF W+D ++ +VA+  V+D+++K HP ++    KS   Y +L  V+    +     ES +
Sbjct: 88  GFSWDDTRQMVVADNCVWDEYLKIHPDSRSFRIKSIPCYKDLCLVYSDGMSEHKAEESIS 147

Query: 68  D 69
           +
Sbjct: 148 E 148

[Close]

BLAST of IVF0020730 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 9.4e-04
Identity = 23/89 (25.84%), Postives = 39/89 (43.82%), Query Frame = 0


Query: 8   GFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVF------GKDRATGG 67
           GF W++ +  I A+  V+D ++K HP A+    KS   Y++L  +F      G D    G
Sbjct: 245 GFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIFACQAEQGTDHRDDG 304

Query: 68  RAESFADIGSNDPPGYDAFAADAVPDTDF 91
            A   ++  ++     D       P  D+
Sbjct: 305 SAAQTSETKASQEQNSDRTRIFWTPPMDY 333

[Close]

BLAST of IVF0020730 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 9.4e-04
Identity = 23/89 (25.84%), Postives = 39/89 (43.82%), Query Frame = 0


Query: 8   GFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVF------GKDRATGG 67
           GF W++ +  I A+  V+D ++K HP A+    KS   Y++L  +F      G D    G
Sbjct: 245 GFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIFACQAEQGTDHRDDG 304

Query: 68  RAESFADIGSNDPPGYDAFAADAVPDTDF 91
            A   ++  ++     D       P  D+
Sbjct: 305 SAAQTSETKASQEQNSDRTRIFWTPPMDY 333

The following BLAST results are available for this feature:

BLAST of IVF0020730 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0020730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VF53	1.5e-81	73.42	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U4M2	6.3e-80	71.17	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DPR5	4.1e-79	71.17	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TXU5	4.1e-79	71.17	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UME4	6.9e-79	71.17	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0020730 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065737.1	9.73e-103	73.42	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0050782.1	2.98e-101	71.17	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048362.1	1.52e-99	71.17	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035621.1	1.73e-99	71.17	retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon...	[more]
KAA0038122.1	3.48e-99	71.17	retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon...	[more]

BLAST of IVF0020730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30140.1	6.3e-08	40.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.1	5.5e-04	29.51	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	5.5e-04	29.51	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24960.1	9.4e-04	25.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	9.4e-04	25.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 3..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020730.1	IVF0020730.1	mRNA