IVF0020713 (gene) Melon (IVF77) v1

Overview
NameIVF0020713
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr02: 12645896 .. 12646063 (+)
RNA-Seq ExpressionIVF0020713
SyntenyIVF0020713
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTCAACATTAAGAAATCAGAATTAGAAAGTCAAATAGTAGCAATCAATAGCTCAACATGGACCGTAGCTAGTATGATCATAGGGACATGGACAGAATGTGCAAAGAGAGAACTTGAACATTATTACGAGGTGCATCGAGAAAAATATGAGGTTGTTTAA

mRNA sequence

ATGGAGGAGCTCAACATTAAGAAATCAGAATTAGAAAGTCAAATAGTAGCAATCAATAGCTCAACATGGACCGTAGCTAGTATGATCATAGGGACATGGACAGAATGTGCAAAGAGAGAACTTGAACATTATTACGAGGTGCATCGAGAAAAATATGAGGTTGTTTAA

Coding sequence (CDS)

ATGGAGGAGCTCAACATTAAGAAATCAGAATTAGAAAGTCAAATAGTAGCAATCAATAGCTCAACATGGACCGTAGCTAGTATGATCATAGGGACATGGACAGAATGTGCAAAGAGAGAACTTGAACATTATTACGAGGTGCATCGAGAAAAATATGAGGTTGTTTAA

Protein sequence

MEELNIKKSELESQIVAINSSTWTVASMIIGTWTECAKRELEHYYEVHREKYEVV
Homology
BLAST of IVF0020713 vs. ExPASy TrEMBL
Match: A0A5D3DFG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00720 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-05
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0

Query: 24 TVASMIIGTWTECAKRELEHYYEVHREKYEV 55
          TVASMIIGTW ECAKR++EHYY+  REKYEV
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEV 32

BLAST of IVF0020713 vs. ExPASy TrEMBL
Match: A0A5A7SR74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00040 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-05
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0

Query: 24 TVASMIIGTWTECAKRELEHYYEVHREKYEV 55
          TVASMIIGTW ECAKR++EHYY+  REKYEV
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEV 32

BLAST of IVF0020713 vs. NCBI nr
Match: TYK22029.1 (uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 2.24e-08
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0

Query: 24 TVASMIIGTWTECAKRELEHYYEVHREKYEV 54
          TVASMIIGTW ECAKR++EHYY+  REKYEV
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEV 32

BLAST of IVF0020713 vs. NCBI nr
Match: KAA0032933.1 (uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 2.38e-08
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0

Query: 24 TVASMIIGTWTECAKRELEHYYEVHREKYEV 54
          TVASMIIGTW ECAKR++EHYY+  REKYEV
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEV 32

BLAST of IVF0020713 vs. NCBI nr
Match: KAA0045599.1 (hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 51.2 bits (121), Expect = 2.32e-06
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0

Query: 24 TVASMIIGTWTECAKRELEHYYEVHREKYEV 54
          TVASMII TW  CAKRE+EHYYE  R K+EV
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEV 81

BLAST of IVF0020713 vs. NCBI nr
Match: KGN65701.1 (hypothetical protein Csa_019881 [Cucumis sativus])

HSP 1 Score: 50.8 bits (120), Expect = 2.83e-06
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 0

Query: 27 SMIIGTWTECAKRELEHYYEVHREKYEV 54
          SM+IGTW ECA+R++EHYYEV R KYEV
Sbjct: 3  SMVIGTWAECARRKIEHYYEVCRGKYEV 30

BLAST of IVF0020713 vs. NCBI nr
Match: XP_008451970.1 (PREDICTED: uncharacterized protein LOC103493114 [Cucumis melo] >TYK16591.1 TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 49.7 bits (117), Expect = 5.27e-05
Identity = 31/58 (53.45%), Postives = 35/58 (60.34%), Query Frame = 0

Query: 1   MEELNIKKSELESQIVAINSSTWTVASMIIGTWT-----ECAKRELEHYYEVHREKYE 53
           MEELN KK+ELE QIVAI  +       I    +     ECAKRELE YYE+ R KYE
Sbjct: 203 MEELNTKKTELEIQIVAIKKTEEDGRRNIEDLESKYSKLECAKRELEDYYELRRRKYE 260

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFG82.2e-0580.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SR742.2e-0580.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK22029.12.24e-0880.65uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa][more]
KAA0032933.12.38e-0880.65uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa][more]
KAA0045599.12.32e-0674.19hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa][more]
KGN65701.12.83e-0675.00hypothetical protein Csa_019881 [Cucumis sativus][more]
XP_008451970.15.27e-0553.45PREDICTED: uncharacterized protein LOC103493114 [Cucumis melo] >TYK16591.1 TSA1-... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0020713.1IVF0020713.1mRNA