IVF0020675 (gene) Melon (IVF77) v1

Overview
NameIVF0020675
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 24301722 .. 24302218 (+)
RNA-Seq ExpressionIVF0020675
SyntenyIVF0020675
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATACTCAAAATAAAAAGATAATAACAATAATTATATAATATATATGAAGATGAGAAAGAAGATTGGTTTGTTAGCAATGGCGATATTGGTGGTGCTGATGGCCATGTCAGCTCAAGCAGCCTCCTCCGAAGTTGGGGAGGTGATTGAACTCCCGTCCGATGAGGTGACGAAGGAGGTCGTGACTACAGATATGGAGATGTGGCCGAGAAAAATGATGAAAGACGAAGGAGGAAAGGGCCGAGAAAATGCATGCTTGCTTATAGGCAATGCATGCAGCAGCGATGCAAATTGCTTACCTGGGTGCACCTGTAGAACCACTCTAATACTAAAACTCGGCTTTTGTTCTCCATTTTGATTATGAACATCAACTTATGTATGTTTTTCTCAATCACTGATTAAGTATTACCAATGTATGCTTTGTCTAAGTTATTGCGATAATTGTATCCATTTTCTATGTTCCCATGTGTTTTCAAGAATAAAGCGGAGCCTTTTCT

mRNA sequence

ATCATACTCAAAATAAAAAGATAATAACAATAATTATATAATATATATGAAGATGAGAAAGAAGATTGGTTTGTTAGCAATGGCGATATTGGTGGTGCTGATGGCCATGTCAGCTCAAGCAGCCTCCTCCGAAGTTGGGGAGGTGATTGAACTCCCGTCCGATGAGGTGACGAAGGAGGTCGTGACTACAGATATGGAGATGTGGCCGAGAAAAATGATGAAAGACGAAGGAGGAAAGGGCCGAGAAAATGCATGCTTGCTTATAGGCAATGCATGCAGCAGCGATGCAAATTGCTTACCTGGGTGCACCTGTAGAACCACTCTAATACTAAAACTCGGCTTTTGTTCTCCATTTTGATTATGAACATCAACTTATGTATGTTTTTCTCAATCACTGATTAAGTATTACCAATGTATGCTTTGTCTAAGTTATTGCGATAATTGTATCCATTTTCTATGTTCCCATGTGTTTTCAAGAATAAAGCGGAGCCTTTTCT

Coding sequence (CDS)

ATGAAGATGAGAAAGAAGATTGGTTTGTTAGCAATGGCGATATTGGTGGTGCTGATGGCCATGTCAGCTCAAGCAGCCTCCTCCGAAGTTGGGGAGGTGATTGAACTCCCGTCCGATGAGGTGACGAAGGAGGTCGTGACTACAGATATGGAGATGTGGCCGAGAAAAATGATGAAAGACGAAGGAGGAAAGGGCCGAGAAAATGCATGCTTGCTTATAGGCAATGCATGCAGCAGCGATGCAAATTGCTTACCTGGGTGCACCTGTAGAACCACTCTAATACTAAAACTCGGCTTTTGTTCTCCATTTTGA

Protein sequence

MKMRKKIGLLAMAILVVLMAMSAQAASSEVGEVIELPSDEVTKEVVTTDMEMWPRKMMKDEGGKGRENACLLIGNACSSDANCLPGCTCRTTLILKLGFCSPF
Homology
BLAST of IVF0020675 vs. ExPASy TrEMBL
Match: A0A5D3E1J3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00550 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.4e-23
Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 0

Query: 3   MRKKIGLLAMAILVVLMAMSAQAASSEVGEVIELPSDEVTKEVVTTDMEMWPRKMMKDEG 62
           M KK+GLLAMA+L +LMA+SA A SSEV EVIELPSDE    VV T+MEMW RKMMK+  
Sbjct: 5   MSKKVGLLAMAVL-MLMAISAGATSSEVDEVIELPSDEANM-VVATNMEMWSRKMMKEGD 64

Query: 63  GKGRENA-CLLIGNACSSDANCLPGCTCRTTLILKLGFCSPF 104
            KG  N  CL++G  C+SD NC  GC C+TT ILKLG CSPF
Sbjct: 65  RKGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILKLGICSPF 104

BLAST of IVF0020675 vs. ExPASy TrEMBL
Match: A0A5A7TM06 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00550 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22
Identity = 65/102 (63.73%), Postives = 75/102 (73.53%), Query Frame = 0

Query: 3   MRKKIGLLAMAILVVLMAMSAQAASSEVGEVIELPSDEVTKEVVTTDMEMWPRKMMKDEG 62
           M KK+G LAMA+L +LMA+SA A SSEV EVIELPSDE    VV T+MEMW RKMMK+  
Sbjct: 5   MSKKVGFLAMAVL-MLMAISAGATSSEVDEVIELPSDEANM-VVATNMEMWSRKMMKEGD 64

Query: 63  GKGRENA-CLLIGNACSSDANCLPGCTCRTTLILKLGFCSPF 104
            KG  N  CL++G  C+SD NC  GC C+TT ILKLG CSPF
Sbjct: 65  RKGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILKLGICSPF 104

BLAST of IVF0020675 vs. ExPASy TrEMBL
Match: A0A0A0KY29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000770 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.5e-04
Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 0

Query: 3   MRKKIGLLAMAILVVLMAMSAQAAS-SEVGEVIELPSDEVTKEVVTTDMEMWPRKMMKDE 62
           M KK  ++   + V+L+A S +A     + E  E+ SDEV K     +M   PRK+    
Sbjct: 1   MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK--AGLEMIFAPRKLKLRN 60

Query: 63  GGKGRENACLLIGNACSSDANCLPGCTCRTTLILKLGFC 101
           GG  R   CLL+G  C SDA+C  GC C+   +L +G+C
Sbjct: 61  GG-SRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC 96

BLAST of IVF0020675 vs. NCBI nr
Match: KAE8649030.1 (hypothetical protein Csa_015018 [Cucumis sativus])

HSP 1 Score: 135 bits (339), Expect = 1.02e-38
Identity = 73/103 (70.87%), Postives = 84/103 (81.55%), Query Frame = 0

Query: 1   MKMRKKIGLLAMAILVVLMAMSAQAASSEVGEVIELPSDEVTKEVVTTDMEMWPRKMMKD 60
           M+MRKK+GLLAMA+L+ LM +SA+A SSEVG VIELPSDE + EVV T+MEMW RKMMK+
Sbjct: 2   MEMRKKVGLLAMAVLM-LMVISARATSSEVGGVIELPSDEAS-EVVPTNMEMWSRKMMKE 61

Query: 61  EGGKGRENACLLIGNACSSDANCLPGCTCRTTLILKLGFCSPF 103
            G KG    CL+IG  C+SDANCL GC CRTTLILKLG CSPF
Sbjct: 62  GGRKGDNGLCLIIGTPCNSDANCLSGCKCRTTLILKLGLCSPF 102

BLAST of IVF0020675 vs. NCBI nr
Match: TYK29461.1 (hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (292), Expect = 1.55e-31
Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 0

Query: 3   MRKKIGLLAMAILVVLMAMSAQAASSEVGEVIELPSDEVTKEVVTTDMEMWPRKMMKDEG 62
           M KK+GLLAMA+L+ LMA+SA A SSEV EVIELPSDE    VV T+MEMW RKMMK+  
Sbjct: 5   MSKKVGLLAMAVLM-LMAISAGATSSEVDEVIELPSDEANM-VVATNMEMWSRKMMKEGD 64

Query: 63  GKGRENA-CLLIGNACSSDANCLPGCTCRTTLILKLGFCSPF 103
            KG  N  CL++G  C+SD NC  GC C+TT ILKLG CSPF
Sbjct: 65  RKGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILKLGICSPF 104

BLAST of IVF0020675 vs. NCBI nr
Match: KAA0044332.1 (hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (288), Expect = 6.31e-31
Identity = 65/102 (63.73%), Postives = 75/102 (73.53%), Query Frame = 0

Query: 3   MRKKIGLLAMAILVVLMAMSAQAASSEVGEVIELPSDEVTKEVVTTDMEMWPRKMMKDEG 62
           M KK+G LAMA+L+ LMA+SA A SSEV EVIELPSDE    VV T+MEMW RKMMK+  
Sbjct: 5   MSKKVGFLAMAVLM-LMAISAGATSSEVDEVIELPSDEANM-VVATNMEMWSRKMMKEGD 64

Query: 63  GKGRENA-CLLIGNACSSDANCLPGCTCRTTLILKLGFCSPF 103
            KG  N  CL++G  C+SD NC  GC C+TT ILKLG CSPF
Sbjct: 65  RKGSGNGLCLIVGTPCNSDENCFSGCRCKTTPILKLGICSPF 104

BLAST of IVF0020675 vs. NCBI nr
Match: KGN52756.1 (hypothetical protein Csa_014977 [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 3.33e-07
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0

Query: 4   RKKIGLLAMAILVVLMAMSAQAASS-EVGEVIELPSDEVTKEVVTTDMEMWPRKMMKDEG 63
           +K + +LAM + V+L+A S +A     + E  E+ SDEV K     +M   PRK+    G
Sbjct: 3   KKTLVVLAM-VFVLLVANSVRATDIITIDEATEVNSDEVNK--AGLEMIFAPRKLKLRNG 62

Query: 64  GKGRENACLLIGNACSSDANCLPGCTCRTTLILKLGFC 100
           G  R   CLL+G  C SDA+C  GC C+   +L +G+C
Sbjct: 63  GS-RLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC 96

BLAST of IVF0020675 vs. NCBI nr
Match: KAA0044331.1 (hypothetical protein E6C27_scaffold46G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 48.9 bits (115), Expect = 6.79e-05
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 0

Query: 16  VVLMAMSAQAASS-EVGEVIE-LPSDEVTKEVVTTDMEMWPRKMMKDEGGKGRENACLLI 75
           V+L+A S +A     + EVIE + SDEV +     +    PRK+    GG  R   CLL+
Sbjct: 4   VLLVANSVRATDIITIDEVIEEVNSDEVNR--AGLEKIFAPRKLKLKNGGP-RLGVCLLV 63

Query: 76  GNACSSDANCLPGCTCRTTLILKLGFC 100
           G  C SDA+C  GC C+   +L +G+C
Sbjct: 64  GKPCMSDADCPSGCYCKPVPLLDIGYC 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E1J34.4e-2364.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TM061.3e-2263.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KY293.5e-0437.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000770 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAE8649030.11.02e-3870.87hypothetical protein Csa_015018 [Cucumis sativus][more]
TYK29461.11.55e-3164.71hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa][more]
KAA0044332.16.31e-3163.73hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa][more]
KGN52756.13.33e-0738.78hypothetical protein Csa_014977 [Cucumis sativus][more]
KAA0044331.16.79e-0539.08hypothetical protein E6C27_scaffold46G00540 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0020675.2IVF0020675.2mRNA