IVF0020566 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTTTGTTATATGTGACCAAGAAAGCCTCATCTCTTGTTGAACCTCATCCTCAAACTCAAAGAAAAAAAACTACCACTCTCCTCCCCATGAGTTCCATAGGCCAAAGCATTCTGATGGCCCTCGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACCGCCACCGTTTCTTCACCAATTGGAAGAAGAGACCTCCTCTTGTCCACTGTCGCCCCCGCCTCCACCGCCGCCGCCGCCGCCGCGGTCGACTCCAGAACTGAGCTGCTAAAAAGTGGTGCATTCTTCTCTAGCTAGCTTCGTTCTTCCTTTTGGGAGTTTTAATTTCTCTTCTTTCATCAATTTTGCGTTTTACTTTTGAAAATTGTTATTTGTTTCTTTGTTATCTTCCCCAAATATCCATTTTCTTCTTCTTCTTCTTCTCCTGAAGTCTAATTTTGGGCGAAGCATCCAACTGAGTTCATCTGTTTTCGTTATCAATTTACAAATTTTTTGCTCTTTTCTAGAATATCGCAATTTTATTTATTTATTTATTTTGAAAAATAATTTCAAATTTATTAAAATTTTGTTTTTATTTCTTTCCATCCAAAAAAAAAAAATCTTTTTTTAACAATTTTATGTTCTAAAATGGTTTTAGTGAATTATTCAACACTTAGCAAATGAATTTTTTTTTTTAATTACAAAAGTTGGGTTTTAAATATGTTATGTATTAAAAAGAAAATTCATATTGTAGAGCATTAAAAACAATTATAATGTACTTGTAATTAAAAAAAAAAAGATTTCTATTTTTAAAATAAATAATTATATTGAATAGTGTTATATAAAATATTTGTAAGTATTGTTTATATGTTAAATAATTGATTGATTTTTTATGTGTGTGTGTGTATATATATATATATAGATTTTTAGAGTTTTGGAAATTGGAAATTTAGTTCCTAATAATATGTTTAGTGTTTGACAATTAGTATCTAATAATTATTACAATTTCCTCTAATTATTGACTTTTGTATTTAGGGTACCTCAAGAAGTCTGAAGAAAACAAAGAAAAGAATGACAAGGAGGTAATTTTTAATTTAATAATTTAACCTATTTTTCTAATTGATTAAAAATGTTAAAATAATCCTTATTTTCTTTTTTGAAAAACGATTCAAATGTGATCGTTTGCGGTTTTAGTTACATCGTAAGATATACGATTAAAGATAACATGATTAATTCTTTTGATACAAAATTAACTCTATAATTTTAGCAGAGATTGGAAAGTTACTACAAGCGAAACTACAAAGATTATTTTGAGTTTGTTGAAGGATCAGTGAAGAATAAGAACGAACTTTCGGAAGCTGAAAAAGGTATTGTCGAGTGGCTTAAACGAAATAAATAAAAGAGTATACTTTTTCATTTTTAGTTACCATAAATATAACAATAGTCTTAGTTCAT AAATTTTGTTATATGTGACCAAGAAAGCCTCATCTCTTGTTGAACCTCATCCTCAAACTCAAAGAAAAAAAACTACCACTCTCCTCCCCATGAGTTCCATAGGCCAAAGCATTCTGATGGCCCTCGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACCGCCACCGTTTCTTCACCAATTGGAAGAAGAGACCTCCTCTTGTCCACTGTCGCCCCCGCCTCCACCGCCGCCGCCGCCGCCGCGGTCGACTCCAGAACTGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGAAAACAAAGAAAAGAATGACAAGGAGAGATTGGAAAGTTACTACAAGCGAAACTACAAAGATTATTTTGAGTTTGTTGAAGGATCAGTGAAGAATAAGAACGAACTTTCGGAAGCTGAAAAAGGTATTGTCGAGTGGCTTAAACGAAATAAATAAAAGAGTATACTTTTTCATTTTTAGTTACCATAAATATAACAATAGTCTTAGTTCAT ATGAGTTCCATAGGCCAAAGCATTCTGATGGCCCTCGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACCGCCACCGTTTCTTCACCAATTGGAAGAAGAGACCTCCTCTTGTCCACTGTCGCCCCCGCCTCCACCGCCGCCGCCGCCGCCGCGGTCGACTCCAGAACTGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGAAAACAAAGAAAAGAATGACAAGGAGAGATTGGAAAGTTACTACAAGCGAAACTACAAAGATTATTTTGAGTTTGTTGAAGGATCAGTGAAGAATAAGAACGAACTTTCGGAAGCTGAAAAAGGTATTGTCGAGTGGCTTAAACGAAATAAATAA MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATVSSPIGRRDLLLSTVAPASTAAAAAAVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRNK Homology
BLAST of IVF0020566 vs. ExPASy TrEMBL
Match: A0A1S3C176 (uncharacterized protein LOC103495319 OS=Cucumis melo OX=3656 GN=LOC103495319 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 9.9e-57 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of IVF0020566 vs. ExPASy TrEMBL
Match: A0A6J1JNZ7 (uncharacterized protein LOC111486201 OS=Cucurbita maxima OX=3661 GN=LOC111486201 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.9e-42 Identity = 107/135 (79.26%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of IVF0020566 vs. ExPASy TrEMBL
Match: A0A6J1D574 (uncharacterized protein LOC111017388 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017388 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41 Identity = 101/128 (78.91%), Postives = 111/128 (86.72%), Query Frame = 0
BLAST of IVF0020566 vs. ExPASy TrEMBL
Match: A0A6J1EM63 (uncharacterized protein LOC111434615 OS=Cucurbita moschata OX=3662 GN=LOC111434615 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.6e-41 Identity = 106/140 (75.71%), Postives = 115/140 (82.14%), Query Frame = 0
BLAST of IVF0020566 vs. ExPASy TrEMBL
Match: A0A2I4HLI8 (uncharacterized protein LOC109019213 OS=Juglans regia OX=51240 GN=LOC109019213 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 6.9e-34 Identity = 92/135 (68.15%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of IVF0020566 vs. NCBI nr
Match: XP_008455049.1 (PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]) HSP 1 Score: 228 bits (580), Expect = 1.17e-74 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of IVF0020566 vs. NCBI nr
Match: XP_004136934.1 (uncharacterized protein LOC101214221 [Cucumis sativus] >KAE8645839.1 hypothetical protein Csa_017171 [Cucumis sativus]) HSP 1 Score: 208 bits (529), Expect = 7.23e-67 Identity = 122/130 (93.85%), Postives = 125/130 (96.15%), Query Frame = 0
BLAST of IVF0020566 vs. NCBI nr
Match: XP_038887440.1 (uncharacterized protein LOC120077574 [Benincasa hispida]) HSP 1 Score: 191 bits (484), Expect = 5.94e-60 Identity = 114/134 (85.07%), Postives = 117/134 (87.31%), Query Frame = 0
BLAST of IVF0020566 vs. NCBI nr
Match: XP_022989008.1 (uncharacterized protein LOC111486201 [Cucurbita maxima]) HSP 1 Score: 178 bits (452), Expect = 3.79e-55 Identity = 107/135 (79.26%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of IVF0020566 vs. NCBI nr
Match: XP_022148828.1 (uncharacterized protein LOC111017388 isoform X1 [Momordica charantia]) HSP 1 Score: 177 bits (448), Expect = 1.31e-54 Identity = 101/128 (78.91%), Postives = 111/128 (86.72%), Query Frame = 0
BLAST of IVF0020566 vs. TAIR 10
Match: AT1G49975.1 (INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 136.3 bits (342), Expect = 1.7e-32 Identity = 85/134 (63.43%), Postives = 105/134 (78.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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