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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAAAGGGTATGGATGGGGAGGGGGTAGTGGAGGTGGTGGCGGCGGTGGAGGGGGAGGAGGTGGTGGTGGAGGAGGAGGAGGAGGAAGTGGCGGTGGCGGAGGAGGAGGAGGGGGAGGAAGTGGTGGAGGATGGGTTTCGGGGGAGGAGGGAGTAGAGGGTTTTGTTGGATTTGGGGATGTGGCGGCGGTGGCGGTCATGGAAAAGCATTGGGTAGGAGAGAAGGTCCCTCAAACTAAAAAGTAA mRNA sequence ATGGAAAAGGGTATGGATGGGGAGGGGGTAGTGGAGGTGGTGGCGGCGGTGGAGGGGGAGGAGGTGGTGGTGGAGGAGGAGGAGGAGGAAGTGGCGGTGGCGGAGGAGGAGGAGGGGGAGGAAGGAGTAGAGGGTTTTGTTGGATTTGGGGATGTGGCGGCGGTGGCGGTCATGGAAAAGCATTGGGTAGGAGAGAAGGTCCCTCAAACTAAAAAGTAA Coding sequence (CDS) ATGGAAAAGGGTATGGATGGGGAGGGGGTAGTGGAGGTGGTGGCGGCGGTGGAGGGGGAGGAGGTGGTGGTGGAGGAGGAGGAGGAGGAAGTGGCGGTGGCGGAGGAGGAGGAGGGGGAGGAAGGAGTAGAGGGTTTTGTTGGATTTGGGGATGTGGCGGCGGTGGCGGTCATGGAAAAGCATTGGGTAGGAGAGAAGGTCCCTCAAACTAAAAAGTAA Protein sequence MEKGMDGEGVVEVVAAVEGEEVVVEEEEEEVAVAEEEEGEEGVEGFVGFGDVAAVAVMEKHWVGEKVPQTKK
Homology
BLAST of IVF0020531 vs. ExPASy TrEMBL
Match: A0A0A0KGL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504700 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.9e-07 Identity = 32/38 (84.21%), Postives = 32/38 (84.21%), Query Frame = 0
Query: 39 GEEGVEGFVGFGDV----AAVAVMEKHWVGEKVPQTKK 73
GEEG EGFVGFGDV AAV VMEKHWVGEKVPQTKK
Sbjct: 148 GEEGAEGFVGFGDVAGAAAAVTVMEKHWVGEKVPQTKK 185
BLAST of IVF0020531 vs. NCBI nr
Match: KAE8647602.1 (hypothetical protein Csa_004179 [Cucumis sativus]) HSP 1 Score: 63.5 bits (153), Expect = 3.62e-10 Identity = 32/38 (84.21%), Postives = 32/38 (84.21%), Query Frame = 0
Query: 39 GEEGVEGFVGFGDVA----AVAVMEKHWVGEKVPQTKK 72
GEEG EGFVGFGDVA AV VMEKHWVGEKVPQTKK
Sbjct: 147 GEEGAEGFVGFGDVAGAAAAVTVMEKHWVGEKVPQTKK 184
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KGL8 | 6.9e-07 | 84.21 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504700 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8647602.1 | 3.62e-10 | 84.21 | hypothetical protein Csa_004179 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 17..37 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 24..44 |
Relationships
The following mRNA feature(s) are a part of this gene:
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