Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAATCAATTCAAAAGAAAATCAAAATCTTTGAACTATCAGATTTCAACGTAAGTTTAATTCTTCAATATTGTGTTTACGGAATTTAGTTGTTTAGTTATTATTAATACAATTGTTAATTTTCTTTTTTTCTGATTTATTTTCATGCAGAAGATCAACAAAAATGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCAAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAATGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCGAATTTTGGTCCTTTGTAGAAACTTGCAATAACAATGAAAATCCAGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAATACAGTCGAAAACACTTTGCAATAATAGAACTAAATGTAGGGTTAATGAGAGAAGAGATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTATAGTAATTAA
mRNA sequence
ATGGCGAATCAATTCAAAAGAAAATCAAAATCTTTGAACTATCAGATTTCAACAAGATCAACAAAAATGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCAAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAATGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCGAATTTTGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAATACAGTCGAAAACACTTTGCAATAATAGAACTAAATGTAGGGTTAATGAGAGAAGAGATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTATAGTAATTAA
Coding sequence (CDS)
ATGGCGAATCAATTCAAAAGAAAATCAAAATCTTTGAACTATCAGATTTCAACAAGATCAACAAAAATGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCAAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAATGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCGAATTTTGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAATACAGTCGAAAACACTTTGCAATAATAGAACTAAATGTAGGGTTAATGAGAGAAGAGATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTATAGTAATTAA
Protein sequence
MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPNFESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISIQSKTLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Homology
BLAST of IVF0020493 vs. ExPASy Swiss-Prot
Match:
Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 2.8e-09
Identity = 63/240 (26.25%), Postives = 109/240 (45.42%), Query Frame = 0
Query: 9 SKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLH 68
S SL+ S R +K +S + SLP DLL+E+ + +SS + +L +K F
Sbjct: 4 SLSLHASSSIRKSKTK----ASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRR 63
Query: 69 ASNDRYIFRHVSLKNESFRNLLWN-----------NTPNFESLYRKGMLEFFTHCNEASG 128
+++Y+F +SLK F L W+ + N E+L++KG + +F + G
Sbjct: 64 ICDEKYVFYRLSLKEIEF--LPWHENSAKFIERCTESRNPEALFQKGFINYFRDKLQDRG 123
Query: 129 LACLKLSAQKGYVDACYVYGVVL--YAADLVDEGL----AYLKMCEVKLGNKMAECRRRV 188
L L +A+KG +A YVYGV+L +G + +K N++ E R ++
Sbjct: 124 LEYLAEAAEKGIKEAKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKI 183
Query: 189 KEFVWYFWVKNKISIQ--------SKTLCNNRTKCRVNERRDGWD-WKDEDDYYGEHTCE 223
++ + FW + ++ K C+ +T+ + GW + DE D CE
Sbjct: 184 QKIRYGFWWSDNTVVEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237
BLAST of IVF0020493 vs. ExPASy TrEMBL
Match:
A0A5A7SSE7 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002890 PE=4 SV=1)
HSP 1 Score: 377.1 bits (967), Expect = 5.6e-101
Identity = 194/234 (82.91%), Postives = 195/234 (83.33%), Query Frame = 0
Query: 24 MCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 83
MCKPLSS LIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN
Sbjct: 1 MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60
Query: 84 ESFRNLLWNNTPNF-------------ESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 143
ESFRNLLWNNTP F ESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV
Sbjct: 61 ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120
Query: 144 DACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISIQSKT 203
DACYVYGVVLYAADLVDEGLAYLKMCEVKL NKMAECRRRVKEFVW
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180
Query: 204 LCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 245
VNERR+GWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Sbjct: 181 ---------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211
BLAST of IVF0020493 vs. ExPASy TrEMBL
Match:
A0A0A0LS96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 1.7e-81
Identity = 167/259 (64.48%), Postives = 194/259 (74.90%), Query Frame = 0
Query: 3 NQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLA 62
NQ KR S +L+ QIS + K LS ++I SLPNDLL EVLAKVA+SSY+DL++AKLA
Sbjct: 4 NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63
Query: 63 TKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPNF-------------ESLYRKGMLEFF 122
TK FL ASNDRYIF+HVSL N FRNLLWNN+P F ESLYRKGMLEFF
Sbjct: 64 TKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFF 123
Query: 123 THCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRR 182
THC EASG+A LK SAQKGYVDACYV+GV+LYA++L DEGL +LK EVKLGNKM ECR+
Sbjct: 124 THCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQ 183
Query: 183 RVKEFVWYFWVKNKISIQS-----KTLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEEC 242
RVKEFV Y W+KNKIS+ C+ CRVNE+ + WD KDEDDYYG++TCEEC
Sbjct: 184 RVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEEC 243
Query: 243 KWKNEVSRFCNMLRSGGYS 244
KW NEV RFC MLR+G +S
Sbjct: 244 KWNNEVLRFCKMLRTGRFS 260
BLAST of IVF0020493 vs. ExPASy TrEMBL
Match:
A0A1S3BXN2 (putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV=1)
HSP 1 Score: 303.1 bits (775), Expect = 1.0e-78
Identity = 165/260 (63.46%), Postives = 184/260 (70.77%), Query Frame = 0
Query: 1 MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
MAN K KS + IS + K LS ++I SLPNDLL EVLAKVA+SSYVDLV+AK
Sbjct: 1 MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60
Query: 61 LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPNF-------------ESLYRKGMLE 120
LATK FL AS DRYIF+HVSL N F N LWNN+P F ESLYRKGMLE
Sbjct: 61 LATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGMLE 120
Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAEC 180
FFTHC EASGLA LKLSAQKGYVDACYV V+LYA+ DEG +LK E KL NKMAEC
Sbjct: 121 FFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAEC 180
Query: 181 RRRVKEFVWYFWVKNKISIQSK----TLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEE 240
R RVK FV Y W+KN+IS + C+ CRVNERR+ WDWKDEDDYYGE+TCE+
Sbjct: 181 RWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEK 240
Query: 241 CKWKNEVSRFCNMLRSGGYS 244
CKW NEV RFC MLR+G YS
Sbjct: 241 CKWNNEVFRFCKMLRTGRYS 258
BLAST of IVF0020493 vs. ExPASy TrEMBL
Match:
A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 4.3e-77
Identity = 160/262 (61.07%), Postives = 186/262 (70.99%), Query Frame = 0
Query: 1 MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
MA KRKS++L QIS R TK S I SLPNDLLIE+LAKVA+SSY DLV+AK
Sbjct: 1 MAGSLKRKSQALGSQIS-RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60
Query: 61 LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPNF-------------ESLYRKGMLE 120
LATK FL AS+ YIF+H SL+N F LLWNN+ F E+LYRKGMLE
Sbjct: 61 LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120
Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAEC 180
FFTHC EASG+ LK+SAQKGY +ACYVYG++LYA + DEG+ +LK+CE KLG K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180
Query: 181 RRRVKEFVWYFWVKNKISIQSKTL-----CNNRTK--CRVNERRDGWDWKDEDDYYGEHT 240
RRRVKEFV + WVKNKIS+Q K C N K C+ N RR GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240
Query: 241 CEECKWKNEVSRFCNMLRSGGY 243
CE CKW EV RFCNMLR+G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259
BLAST of IVF0020493 vs. ExPASy TrEMBL
Match:
A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)
HSP 1 Score: 297.0 bits (759), Expect = 7.3e-77
Identity = 160/262 (61.07%), Postives = 185/262 (70.61%), Query Frame = 0
Query: 1 MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
MA KRKS+SL IS R TK S I SLPNDLLIE+LAKVA+SSY DLV+AK
Sbjct: 1 MAGSLKRKSQSLGSHIS-RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60
Query: 61 LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPNF-------------ESLYRKGMLE 120
LATK FL AS+ YIF+H SL+N F LLWNN+ F E+LYRKGMLE
Sbjct: 61 LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120
Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAEC 180
FFTHC EASG+ LK+SAQKGY +ACYVYG++LYA + DEG+ +LK+CE KLG K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180
Query: 181 RRRVKEFVWYFWVKNKISIQSKTL-----CNNRTK--CRVNERRDGWDWKDEDDYYGEHT 240
RRRVKEFV + WVKNKIS+Q K C N K C+ N RR GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240
Query: 241 CEECKWKNEVSRFCNMLRSGGY 243
CE CKW EV RFCNMLR+G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259
BLAST of IVF0020493 vs. NCBI nr
Match:
KAE8648647.1 (hypothetical protein Csa_009058 [Cucumis sativus])
HSP 1 Score: 385 bits (988), Expect = 6.73e-133
Identity = 196/258 (75.97%), Postives = 219/258 (84.88%), Query Frame = 0
Query: 1 MANQFKRKSK-SLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRA 60
MANQ KRKS+ S N QISTR TK MC+P SSSLIVSLPNDLLIEVLAKVA+SSY+DLV+A
Sbjct: 1 MANQLKRKSEPSFNSQISTR-TKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQA 60
Query: 61 KLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTP-------------NFESLYRKGML 120
KLATKLFLHASND YIF+HVSL+N+SFRNLLWNNTP N ESLYRKG +
Sbjct: 61 KLATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTM 120
Query: 121 EFFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAE 180
EFF+H EASGL+ LK SAQKGYVDACYVYGVV+YAA+L +EG+ YLKMCE KLGNKMAE
Sbjct: 121 EFFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAE 180
Query: 181 CRRRVKEFVWYFWVKNKISIQSKTLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEECKW 240
CRRRVKEFVWYFW+KN+IS+ SK +C+N C+VNER +GWDWKDEDDYYGEHTCE+CKW
Sbjct: 181 CRRRVKEFVWYFWIKNRISM-SKEICSN-VNCKVNERSNGWDWKDEDDYYGEHTCEQCKW 240
Query: 241 KNEVSRFCNMLRSGGYSN 244
NEV RFCNMLR GGYSN
Sbjct: 241 SNEVLRFCNMLRRGGYSN 255
BLAST of IVF0020493 vs. NCBI nr
Match:
KAA0034134.1 (putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 379 bits (973), Expect = 2.71e-131
Identity = 194/234 (82.91%), Postives = 195/234 (83.33%), Query Frame = 0
Query: 24 MCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 83
MCKPLSS LIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN
Sbjct: 1 MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60
Query: 84 ESFRNLLWNNTPNF-------------ESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 143
ESFRNLLWNNTP F ESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV
Sbjct: 61 ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120
Query: 144 DACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISIQSKT 203
DACYVYGVVLYAADLVDEGLAYLKMCEVKL NKMAECRRRVKEFVW
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180
Query: 204 LCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 244
VNERR+GWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Sbjct: 181 ---------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211
BLAST of IVF0020493 vs. NCBI nr
Match:
XP_038891683.1 (putative F-box protein At1g67623 [Benincasa hispida])
HSP 1 Score: 315 bits (807), Expect = 1.31e-105
Identity = 158/234 (67.52%), Postives = 180/234 (76.92%), Query Frame = 0
Query: 29 SSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRN 88
S S+I SLPNDLLIEVLAKVA+SSY DLV+AKLATK FL SN+ YIFRHVSL N F
Sbjct: 6 SPSVIKSLPNDLLIEVLAKVAASSYTDLVQAKLATKDFLEVSNEGYIFRHVSLGN--FSK 65
Query: 89 LLWNNTPNF-------------ESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDACYV 148
LLWNN+P F ESLYRKGMLEFFTHC EASGL LK SA+K Y+DACYV
Sbjct: 66 LLWNNSPEFWSLIETCNNNENPESLYRKGMLEFFTHCREASGLGYLKRSAEKDYMDACYV 125
Query: 149 YGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISIQSKTL---- 208
YGVVLYA +L +EGL +L+ CE KLGNKM+ECRRRVKEFVW W+KNK+S+ K
Sbjct: 126 YGVVLYATNLKEEGLQFLRNCEAKLGNKMSECRRRVKEFVWCLWIKNKVSLSEKEFGGRR 185
Query: 209 -CNN--RTKCRVNERRDGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGY 242
C+N + C +NE+R+GWDWKDEDD+YGEHTCEECKWK EVSRFCNMLR+G Y
Sbjct: 186 YCSNVIKNNCLINEKRNGWDWKDEDDHYGEHTCEECKWKGEVSRFCNMLRTGAY 237
BLAST of IVF0020493 vs. NCBI nr
Match:
XP_004137554.1 (putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical protein Csa_013173 [Cucumis sativus])
HSP 1 Score: 314 bits (805), Expect = 5.60e-105
Identity = 167/259 (64.48%), Postives = 194/259 (74.90%), Query Frame = 0
Query: 3 NQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLA 62
NQ KR S +L+ QIS + K LS ++I SLPNDLL EVLAKVA+SSY+DL++AKLA
Sbjct: 4 NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63
Query: 63 TKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPNF-------------ESLYRKGMLEFF 122
TK FL ASNDRYIF+HVSL N FRNLLWNN+P F ESLYRKGMLEFF
Sbjct: 64 TKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFF 123
Query: 123 THCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRR 182
THC EASG+A LK SAQKGYVDACYV+GV+LYA++L DEGL +LK EVKLGNKM ECR+
Sbjct: 124 THCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQ 183
Query: 183 RVKEFVWYFWVKNKISIQSKTL-----CNNRTKCRVNERRDGWDWKDEDDYYGEHTCEEC 242
RVKEFV Y W+KNKIS+ C+ CRVNE+ + WD KDEDDYYG++TCEEC
Sbjct: 184 RVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEEC 243
BLAST of IVF0020493 vs. NCBI nr
Match:
XP_008453691.1 (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])
HSP 1 Score: 305 bits (780), Expect = 3.30e-101
Identity = 165/260 (63.46%), Postives = 184/260 (70.77%), Query Frame = 0
Query: 1 MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
MAN K KS + IS + K LS ++I SLPNDLL EVLAKVA+SSYVDLV+AK
Sbjct: 1 MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60
Query: 61 LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPNF-------------ESLYRKGMLE 120
LATK FL AS DRYIF+HVSL N F N LWNN+P F ESLYRKGMLE
Sbjct: 61 LATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGMLE 120
Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAEC 180
FFTHC EASGLA LKLSAQKGYVDACYV V+LYA+ DEG +LK E KL NKMAEC
Sbjct: 121 FFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAEC 180
Query: 181 RRRVKEFVWYFWVKNKISIQSKT----LCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEE 240
R RVK FV Y W+KN+IS + C+ CRVNERR+ WDWKDEDDYYGE+TCE+
Sbjct: 181 RWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEK 240
Query: 241 CKWKNEVSRFCNMLRSGGYS 243
CKW NEV RFC MLR+G YS
Sbjct: 241 CKWNNEVFRFCKMLRTGRYS 258
BLAST of IVF0020493 vs. TAIR 10
Match:
AT1G67623.1 (F-box family protein )
HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10
Identity = 63/240 (26.25%), Postives = 109/240 (45.42%), Query Frame = 0
Query: 9 SKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLH 68
S SL+ S R +K +S + SLP DLL+E+ + +SS + +L +K F
Sbjct: 4 SLSLHASSSIRKSKTK----ASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRR 63
Query: 69 ASNDRYIFRHVSLKNESFRNLLWN-----------NTPNFESLYRKGMLEFFTHCNEASG 128
+++Y+F +SLK F L W+ + N E+L++KG + +F + G
Sbjct: 64 ICDEKYVFYRLSLKEIEF--LPWHENSAKFIERCTESRNPEALFQKGFINYFRDKLQDRG 123
Query: 129 LACLKLSAQKGYVDACYVYGVVL--YAADLVDEGL----AYLKMCEVKLGNKMAECRRRV 188
L L +A+KG +A YVYGV+L +G + +K N++ E R ++
Sbjct: 124 LEYLAEAAEKGIKEAKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKI 183
Query: 189 KEFVWYFWVKNKISIQ--------SKTLCNNRTKCRVNERRDGWD-WKDEDDYYGEHTCE 223
++ + FW + ++ K C+ +T+ + GW + DE D CE
Sbjct: 184 QKIRYGFWWSDNTVVEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237
BLAST of IVF0020493 vs. TAIR 10
Match:
AT2G35280.1 (F-box family protein )
HSP 1 Score: 42.4 bits (98), Expect = 6.3e-04
Identity = 40/141 (28.37%), Postives = 67/141 (47.52%), Query Frame = 0
Query: 31 SLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSL-----KNES 90
S + +LP DLL E++AK+ S D L+ K ++ND + + ++L K S
Sbjct: 9 SRLEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPLS 68
Query: 91 FR-------NLLWNNTPNFESLYRKGMLEFFT--HCNEASGLACLKLSAQKGYVDACYVY 150
R L NN P ++ Y KG++ +F HC+ L + ++A G +A Y+Y
Sbjct: 69 CRKHLLIMKKCLANNNP--DAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYMY 128
Query: 151 GVVLYAADLVDEGLAYLKMCE 158
++L +EG Y+ E
Sbjct: 129 AMLLLCRGRTEEGKTYMSQLE 145
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9FXC7 | 2.8e-09 | 26.25 | Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SSE7 | 5.6e-101 | 82.91 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3... | [more] |
| A0A0A0LS96 | 1.7e-81 | 64.48 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1 | [more] |
| A0A1S3BXN2 | 1.0e-78 | 63.46 | putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV... | [more] |
| A0A6J1JRX4 | 4.3e-77 | 61.07 | putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=... | [more] |
| A0A6J1JRV1 | 7.3e-77 | 61.07 | putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8648647.1 | 6.73e-133 | 75.97 | hypothetical protein Csa_009058 [Cucumis sativus] | [more] |
| KAA0034134.1 | 2.71e-131 | 82.91 | putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box pro... | [more] |
| XP_038891683.1 | 1.31e-105 | 67.52 | putative F-box protein At1g67623 [Benincasa hispida] | [more] |
| XP_004137554.1 | 5.60e-105 | 64.48 | putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical prot... | [more] |
| XP_008453691.1 | 3.30e-101 | 63.46 | PREDICTED: putative F-box protein At1g67623 [Cucumis melo] | [more] |
