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IVF0020366 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGATTGAGAAGAGTTTTAACGCAACTGCATGGGATGCTGAAGACTGCAAAGTTGAACATCAAGTCCAGTTCTGAGGTTTTGATGGTGCAAAAGGGGAAGAATCCCAAGAAAAGGGAACGCGACCAAGGAAAGGGTAAGGAAAAAGTTGTTGTCAAAGCATCAAAAGTTGATGCTCTTGCTGTACCTAGGCCGAGACCCAAACCTAAAGAGCCTAAGCCACCCAAGGAAGGAGAATGTTATTTTTGCAAGAAAATTGAGCATTGGAAGAGGAAATGTCCTCTTTATTTGGAAGAACTGAAGAAAAACAAGGGAAGTATCCCTTCGACTTCAGGTATCTTTATTTTAGAAGTCAATCTATCACATCTAACCCTACATCTTGGGTATAGATACTGGATGTGGTTCCCACATTTGTTGAAATGTGCAGGGACTTAG ATGAGATTGAGAAGAGTTTTAACGCAACTGCATGGGATGCTGAAGACTGCAAAGTTGAACATCAAGTCCAGTTCTGAGGTTTTGATGGTGCAAAAGGGGAAGAATCCCAAGAAAAGGGAACGCGACCAAGGAAAGGGTAAGGAAAAAGTTGTTGTCAAAGCATCAAAAGTTGATGCTCTTGCTGTACCTAGGCCGAGACCCAAACCTAAAGAGCCTAAGCCACCCAAGGAAGGAGAATGTTATTTTTGCAAGAAAATTGAGCATTGGAAGAGGAAATGTCCTCTTTATTTGGAAGAACTGAAGAAAAACAAGGGAAGTATCCCTTCGACTTCAGGGACTTAG ATGAGATTGAGAAGAGTTTTAACGCAACTGCATGGGATGCTGAAGACTGCAAAGTTGAACATCAAGTCCAGTTCTGAGGTTTTGATGGTGCAAAAGGGGAAGAATCCCAAGAAAAGGGAACGCGACCAAGGAAAGGGTAAGGAAAAAGTTGTTGTCAAAGCATCAAAAGTTGATGCTCTTGCTGTACCTAGGCCGAGACCCAAACCTAAAGAGCCTAAGCCACCCAAGGAAGGAGAATGTTATTTTTGCAAGAAAATTGAGCATTGGAAGAGGAAATGTCCTCTTTATTTGGAAGAACTGAAGAAAAACAAGGGAAGTATCCCTTCGACTTCAGGGACTTAG MRLRRVLTQLHGMLKTAKLNIKSSSEVLMVQKGKNPKKRERDQGKGKEKVVVKASKVDALAVPRPRPKPKEPKPPKEGECYFCKKIEHWKRKCPLYLEELKKNKGSIPSTSGT Homology
BLAST of IVF0020366 vs. ExPASy TrEMBL
Match: A0A5A7UN47 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001440 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.3e-48 Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of IVF0020366 vs. ExPASy TrEMBL
Match: A0A5D3C6L2 (Putative retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00230 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 8.2e-47 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of IVF0020366 vs. ExPASy TrEMBL
Match: A0A5A7VL77 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00490 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.9e-36 Identity = 82/111 (73.87%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of IVF0020366 vs. ExPASy TrEMBL
Match: A0A5D3CZL7 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00780 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 2.0e-32 Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of IVF0020366 vs. ExPASy TrEMBL
Match: A0A1S4E1A7 (uncharacterized protein LOC107991397 OS=Cucumis melo OX=3656 GN=LOC107991397 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 2.0e-32 Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of IVF0020366 vs. NCBI nr
Match: TYK07553.1 (putative retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 195 bits (495), Expect = 1.11e-61 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of IVF0020366 vs. NCBI nr
Match: KAA0056624.1 (hypothetical protein E6C27_scaffold288G001440 [Cucumis melo var. makuwa]) HSP 1 Score: 199 bits (505), Expect = 2.72e-61 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of IVF0020366 vs. NCBI nr
Match: KAA0066495.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK06146.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 159 bits (401), Expect = 5.41e-47 Identity = 82/111 (73.87%), Postives = 92/111 (82.88%), Query Frame = 0
BLAST of IVF0020366 vs. NCBI nr
Match: XP_016901775.1 (PREDICTED: uncharacterized protein LOC107991397 [Cucumis melo] >KAA0053417.1 putative polyprotein [Cucumis melo var. makuwa] >TYK15896.1 putative polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 146 bits (369), Expect = 6.08e-43 Identity = 74/104 (71.15%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of IVF0020366 vs. NCBI nr
Match: KAA0032827.1 (putative retrotransposon protein [Cucumis melo var. makuwa] >TYK30383.1 putative retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (294), Expect = 6.11e-31 Identity = 62/80 (77.50%), Postives = 65/80 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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