Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAATACTCGTCGAGGGAAGTATCAAGTTCATTTAACCCCAATTGGTTCTGAAGATGATAACTCCATAACGAACATGCACAATGTTCGAATGAGAAGGAATCGATTCAAAACTACTCCTTATATGCGTCCTTATCGACTACCATCTGAACGAAATCATGTATTACCTTCTGATCCCACTAAGGAGTTTTTGTTTACTGATCCTGTTTAGTTGAATGTTTCTGAGAATGTTGGACATTATGAGTCCAATTTATCTAATATGGACTCAGATGAGAGGGATGATGTACCTCTCATTTATATTTTGAAGCATGGGGTGTTTGGCAAAAATCCTCAACCAGATAGTAGTGTTCCTGGTACCTCTACTGTTGTTCCCTCTCCAAGTGTTCCCTTTGTATCACTGCACTTCACGAGTAGTTCTTCAAAGGATGATGTTCTACCTTCGAATGAACCATAACATTCAGGTGAAAATCTAGAAAATCTATCCTAGGATTTAGTTAATATTGATCAAGGATCTAATTTGTCACATGTTAAGCCAGAATTAGTTCCTACATCTGAAAACCCTGCATCTGAACATTCTACTGAAGTTCAAGAACCTAATAAGGGAAATGAAGCGAGCAGAGATATTATTGACCCTGTATCTGATGTTGGTGAGGATCGTCCTCAGAAGAAATCTAGGAAGGCTTCAACTCGTCCTAAAGTCATTACTACAAAAACTGGACATCGTAAAGTACCCCCAAACATTCCATCTATTCCCATTGATGGAATATCGTTCCACCTTGAAGAGAGTGTGCACAAGTGGAAATATGTAGTTCAGAGGAGAATTGTTGACGAAGTTAACATATCTGACAAACATCACTCTTATCTAAGTGTAATGGACTTGGAGATTCAAGCTGGCCTTTCCAAAACCATCTTCAATGTGGGGCAATTTTATCCTTAA
mRNA sequence
ATGGTGAATACTCGTCGAGGGAAGTATCAAGTTCATTTAACCCCAATTGGTTCTGAAGATGATAACTCCATAACGAACATGCACAATGTTCGAATGAGAAGGAATCGATTCAAAACTACTCCTTATATGCGTCCTTATCGACTACCATCTGAACGAAATCATGTATTACCTTCTGATCCCACTAAGGAGTTTTTGTTTACTGATCCTTCCAATTTATCTAATATGGACTCAGATGAGAGGGATGATGTACCTCTCATTTATATTTTGAAGCATGGGGTGTTTGGCAAAAATCCTCAACCAGATAGTAGTGTTCCTGGTACCTCTACTGTTGTTCCCTCTCCAAGTGTTCCCTTTGTATCACTGCACTTCACGAGTAGTTCTTCAAAGGATGATGATTTAGTTAATATTGATCAAGGATCTAATTTGTCACATGTTAAGCCAGAATTAGTTCCTACATCTGAAAACCCTGCATCTGAACATTCTACTGAAGTTCAAGAACCTAATAAGGGAAATGAAGCGAGCAGAGATATTATTGACCCTGTATCTGATGTTGGTGAGGATCGTCCTCAGAAGAAATCTAGGAAGGCTTCAACTCGTCCTAAAGTCATTACTACAAAAACTGGACATCGTAAAGTACCCCCAAACATTCCATCTATTCCCATTGATGGAATATCGTTCCACCTTGAAGAGAGTGTGCACAAGTGGAAATATGTAGTTCAGAGGAGAATTGTTGACGAAGTTAACATATCTGACAAACATCACTCTTATCTAAGTGTAATGGACTTGGAGATTCAAGCTGGCCTTTCCAAAACCATCTTCAATGTGGGGCAATTTTATCCTTAA
Coding sequence (CDS)
ATGGTGAATACTCGTCGAGGGAAGTATCAAGTTCATTTAACCCCAATTGGTTCTGAAGATGATAACTCCATAACGAACATGCACAATGTTCGAATGAGAAGGAATCGATTCAAAACTACTCCTTATATGCGTCCTTATCGACTACCATCTGAACGAAATCATGTATTACCTTCTGATCCCACTAAGGAGTTTTTGTTTACTGATCCTTCCAATTTATCTAATATGGACTCAGATGAGAGGGATGATGTACCTCTCATTTATATTTTGAAGCATGGGGTGTTTGGCAAAAATCCTCAACCAGATAGTAGTGTTCCTGGTACCTCTACTGTTGTTCCCTCTCCAAGTGTTCCCTTTGTATCACTGCACTTCACGAGTAGTTCTTCAAAGGATGATGATTTAGTTAATATTGATCAAGGATCTAATTTGTCACATGTTAAGCCAGAATTAGTTCCTACATCTGAAAACCCTGCATCTGAACATTCTACTGAAGTTCAAGAACCTAATAAGGGAAATGAAGCGAGCAGAGATATTATTGACCCTGTATCTGATGTTGGTGAGGATCGTCCTCAGAAGAAATCTAGGAAGGCTTCAACTCGTCCTAAAGTCATTACTACAAAAACTGGACATCGTAAAGTACCCCCAAACATTCCATCTATTCCCATTGATGGAATATCGTTCCACCTTGAAGAGAGTGTGCACAAGTGGAAATATGTAGTTCAGAGGAGAATTGTTGACGAAGTTAACATATCTGACAAACATCACTCTTATCTAAGTGTAATGGACTTGGAGATTCAAGCTGGCCTTTCCAAAACCATCTTCAATGTGGGGCAATTTTATCCTTAA
Protein sequence
MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
Homology
BLAST of IVF0020304 vs. ExPASy TrEMBL
Match:
A0A5D3DU39 (Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00080 PE=4 SV=1)
HSP 1 Score: 461.1 bits (1185), Expect = 3.4e-126
Identity = 239/280 (85.36%), Postives = 243/280 (86.79%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDP 60
MVNTRRGKYQVHLTPIGSEDD+SITNMHNVRMRRNRFKTTPYMRPYRLPSERNH
Sbjct: 1 MVNTRRGKYQVHLTPIGSEDDSSITNMHNVRMRRNRFKTTPYMRPYRLPSERNH------ 60
Query: 61 TKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVS 120
SNLSNMDSDERDDVPLIYILK GVFGKNPQPDSSVPGTSTVVPSPS +
Sbjct: 61 ---------SNLSNMDSDERDDVPLIYILKRGVFGKNPQPDSSVPGTSTVVPSPSENLEN 120
Query: 121 LHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDP 180
L DLVNIDQGSN SHVKPE VPTSENP SEHS EVQEPNKGNEASRDI+DP
Sbjct: 121 L--------SQDLVNIDQGSNSSHVKPESVPTSENPTSEHSIEVQEPNKGNEASRDILDP 180
Query: 181 VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQ 240
VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVH+WKYVVQ
Sbjct: 181 VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHRWKYVVQ 240
Query: 241 RRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP 281
RR DEVNISDKHHS LSVMDLEIQAGLSKTIFNVGQFYP
Sbjct: 241 RRFADEVNISDKHHSCLSVMDLEIQAGLSKTIFNVGQFYP 257
BLAST of IVF0020304 vs. ExPASy TrEMBL
Match:
A0A5A7UT97 (Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold778G00020 PE=4 SV=1)
HSP 1 Score: 279.3 bits (713), Expect = 1.8e-71
Identity = 156/263 (59.32%), Postives = 189/263 (71.86%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDP 60
MVNTRR KYQV T IGSEDD+S TNMH+VR+R +FKTTP RPYRLPS++N V PSDP
Sbjct: 1 MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDP 60
Query: 61 TKEFLFTDP-------------SNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGT 120
TK+ LF+DP S+LS+MD ++RD+VPL +ILK GVFGKN Q DS VP
Sbjct: 61 TKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKNTQLDSDVPCA 120
Query: 121 STVVPSPSVPFVSLHFTSSSSKDDDLV----------------NIDQGSNLSHVKPELVP 180
S+VV SPS FVSLHFTSSSS +D N+DQ SN +HV+PE +P
Sbjct: 121 SSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIP 180
Query: 181 TSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRK 235
S+N A EH +EVQE ++ NEASRDI +P+SD+GED PQKK+RKAS R K ITTKTG RK
Sbjct: 181 ASDNRAPEHPSEVQELDQENEASRDIPNPISDMGEDHPQKKARKASARAKDITTKTGRRK 240
BLAST of IVF0020304 vs. ExPASy TrEMBL
Match:
A0A5D3DR14 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00670 PE=4 SV=1)
HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 128/330 (38.79%), Postives = 164/330 (49.70%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHV----- 60
MVNTR+G Y + E S + V++R RFK+TP R YRLPSE++ +
Sbjct: 1 MVNTRKGSYMTQPSEDAPEVTISSPPIRQVKVRGQRFKSTPPRRSYRLPSEKSLLHESVL 60
Query: 61 -----------LPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILK-------------- 120
+P+ + +N+SNMDSD+RDDVPL +LK
Sbjct: 61 PESVPVVGESSIPTSSVADAPRVPATNVSNMDSDDRDDVPLARLLKKTMIPDVADKLHVD 120
Query: 121 -------------HGVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKD 180
GVF P PD +P TS V P PS P S S D
Sbjct: 121 PPSFIHSQESSSTKGVF--IPTPD--IPSTSNVQPGPSAHSPPASPPLFSSVNAHKSVPD 180
Query: 181 DDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQ 240
L NI G+ + H V P +H E N+ + ++ P S
Sbjct: 181 AVLGNI-SGAPVRHPNDREVEDEVEP--QHPDIGTEEVPLNDDNNLVVPPASADIPAASN 240
Query: 241 KKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNIS 281
+KA + + ITTKTG +K+PPNIPSIPIDGISFH EESV WK+V+QRRI DEVN+S
Sbjct: 241 PAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIADEVNVS 300
BLAST of IVF0020304 vs. ExPASy TrEMBL
Match:
A0A1S3CDC6 (uncharacterized protein LOC103499143 OS=Cucumis melo OX=3656 GN=LOC103499143 PE=4 SV=1)
HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 128/330 (38.79%), Postives = 164/330 (49.70%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHV----- 60
MVNTR+G Y + E S + V++R RFK+TP R YRLPSE++ +
Sbjct: 1 MVNTRKGSYMTQPSEDAPEVTISSPPIRQVKVRGQRFKSTPPRRSYRLPSEKSLLHESVL 60
Query: 61 -----------LPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILK-------------- 120
+P+ + +N+SNMDSD+RDDVPL +LK
Sbjct: 61 PESVPVVGESSIPTSSVADAPRVPATNVSNMDSDDRDDVPLARLLKKTMIPDVADKLHVD 120
Query: 121 -------------HGVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKD 180
GVF P PD +P TS V P PS P S S D
Sbjct: 121 PPSFIHSQESSSTKGVF--IPTPD--IPSTSNVQPGPSAHSPPASPPLFSSVNAHKSVPD 180
Query: 181 DDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQ 240
L NI G+ + H V P +H E N+ + ++ P S
Sbjct: 181 AVLGNI-SGAPVRHPNDREVEDEVEP--QHPDIGTEEVPLNDDNNLVVPPASADIPAASN 240
Query: 241 KKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNIS 281
+KA + + ITTKTG +K+PPNIPSIPIDGISFH EESV WK+V+QRRI DEVN+S
Sbjct: 241 PAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIADEVNVS 300
BLAST of IVF0020304 vs. ExPASy TrEMBL
Match:
A0A5D3BZR7 (Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00460 PE=4 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39
Identity = 123/290 (42.41%), Postives = 149/290 (51.38%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRP--YRLPSERNHVLPS 60
MVNTRRGKYQ T +G ED ++ TNMH VRMR K P YRL
Sbjct: 1 MVNTRRGKYQTRSTSVGFEDVSTKTNMHGVRMRGINSKLPHLDVPTVYRL---------- 60
Query: 61 DPTKEFLFTDPSNLSNMDSDE--------RDDVPLIYILKHGVFGKNPQPDSSVPGTSTV 120
KE + P L ++ D+ V L+ ++ N Q +
Sbjct: 61 ---KEVTYHLPILLRSLLHDDLVFPLFLCTSRVALLRMISSLRMCHNTQVE--------- 120
Query: 121 VPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKG 180
+ L +S NIDQGSN SHV+PE +P E+PASE
Sbjct: 121 --------MCLKVRTSD-------NIDQGSNPSHVEPESIPNIEHPASE----------- 180
Query: 181 NEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEE 240
+P +KS+K S RPKVITTKT RKVP NI S+ +DGISFHLEE
Sbjct: 181 -----------------QPIEKSKKTSARPKVITTKTSRRKVPLNILSVLLDGISFHLEE 225
Query: 241 SVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP 281
SV +WKYVVQRRI DEVN+SDKHHS LS+M+L I+ GLSKT NVG FYP
Sbjct: 241 SVQRWKYVVQRRITDEVNVSDKHHSCLSIMNLVIKVGLSKTNSNVGPFYP 225
BLAST of IVF0020304 vs. NCBI nr
Match:
TYK27163.1 (cell wall protein RBR3-like [Cucumis melo var. makuwa])
HSP 1 Score: 455 bits (1171), Expect = 4.03e-160
Identity = 239/280 (85.36%), Postives = 243/280 (86.79%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDP 60
MVNTRRGKYQVHLTPIGSEDD+SITNMHNVRMRRNRFKTTPYMRPYRLPSERNH
Sbjct: 1 MVNTRRGKYQVHLTPIGSEDDSSITNMHNVRMRRNRFKTTPYMRPYRLPSERNH------ 60
Query: 61 TKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVS 120
SNLSNMDSDERDDVPLIYILK GVFGKNPQPDSSVPGTSTVVPSPS +
Sbjct: 61 ---------SNLSNMDSDERDDVPLIYILKRGVFGKNPQPDSSVPGTSTVVPSPSENLEN 120
Query: 121 LHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDP 180
L DLVNIDQGSN SHVKPE VPTSENP SEHS EVQEPNKGNEASRDI+DP
Sbjct: 121 L--------SQDLVNIDQGSNSSHVKPESVPTSENPTSEHSIEVQEPNKGNEASRDILDP 180
Query: 181 VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQ 240
VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVH+WKYVVQ
Sbjct: 181 VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHRWKYVVQ 240
Query: 241 RRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP 280
RR DEVNISDKHHS LSVMDLEIQAGLSKTIFNVGQFYP
Sbjct: 241 RRFADEVNISDKHHSCLSVMDLEIQAGLSKTIFNVGQFYP 257
BLAST of IVF0020304 vs. NCBI nr
Match:
KAA0056755.1 (cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYK21011.1 cell wall protein RBR3-like [Cucumis melo var. makuwa])
HSP 1 Score: 273 bits (698), Expect = 4.18e-88
Identity = 156/263 (59.32%), Postives = 189/263 (71.86%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDP 60
MVNTRR KYQV T IGSEDD+S TNMH+VR+R +FKTTP RPYRLPS++N V PSDP
Sbjct: 1 MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDP 60
Query: 61 TKEFLFTDP-------------SNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGT 120
TK+ LF+DP S+LS+MD ++RD+VPL +ILK GVFGKN Q DS VP
Sbjct: 61 TKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKNTQLDSDVPCA 120
Query: 121 STVVPSPSVPFVSLHFTSSSSKDDDLV----------------NIDQGSNLSHVKPELVP 180
S+VV SPS FVSLHFTSSSS +D N+DQ SN +HV+PE +P
Sbjct: 121 SSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIP 180
Query: 181 TSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRK 234
S+N A EH +EVQE ++ NEASRDI +P+SD+GED PQKK+RKAS R K ITTKTG RK
Sbjct: 181 ASDNRAPEHPSEVQELDQENEASRDIPNPISDMGEDHPQKKARKASARAKDITTKTGRRK 240
BLAST of IVF0020304 vs. NCBI nr
Match:
KAA0036711.1 (cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYK03686.1 cell wall protein RBR3-like [Cucumis melo var. makuwa])
HSP 1 Score: 168 bits (426), Expect = 6.04e-46
Identity = 123/288 (42.71%), Postives = 145/288 (50.35%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRP--YRLPSERNHV--- 60
MVNTRRGKYQ T +G ED ++ TNMH VRMR K P YRL H+
Sbjct: 1 MVNTRRGKYQTRSTSVGFEDVSTKTNMHGVRMRGINSKLPHLDVPTVYRLKEVTYHLPIL 60
Query: 61 ---LPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVP 120
L D LF S V L+ ++ N Q + +
Sbjct: 61 LRSLLHDDLVFPLFLCTSR-----------VALLRMISSLRMCHNTQVEMCL-------- 120
Query: 121 SPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNE 180
K NIDQGSN SHV+PE +P E+PASE
Sbjct: 121 ----------------KVRTSDNIDQGSNPSHVEPESIPNIEHPASE------------- 180
Query: 181 ASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESV 240
+P +KS+K S RPKVITTKT RKVP NI S+ +DGISFHLEESV
Sbjct: 181 ---------------QPIEKSKKTSARPKVITTKTSRRKVPLNILSVLLDGISFHLEESV 225
Query: 241 HKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP 280
+WKYVVQRRI DEVN+SDKHHS LS+M+L I+ GLSKT NVG FYP
Sbjct: 241 QRWKYVVQRRITDEVNVSDKHHSCLSIMNLVIKVGLSKTNSNVGPFYP 225
BLAST of IVF0020304 vs. NCBI nr
Match:
XP_008460264.1 (PREDICTED: uncharacterized protein LOC103499143 [Cucumis melo] >KAA0037815.1 uncharacterized protein E6C27_scaffold4066G00050 [Cucumis melo var. makuwa] >TYK26046.1 uncharacterized protein E5676_scaffold1567G00670 [Cucumis melo var. makuwa])
HSP 1 Score: 169 bits (427), Expect = 1.27e-45
Identity = 135/336 (40.18%), Postives = 167/336 (49.70%), Query Frame = 0
Query: 1 MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERN----HVL 60
MVNTR+G Y + E S + V++R RFK+TP R YRLPSE++ VL
Sbjct: 1 MVNTRKGSYMTQPSEDAPEVTISSPPIRQVKVRGQRFKSTPPRRSYRLPSEKSLLHESVL 60
Query: 61 P---------SDPTKEFLFTD---PSNLSNMDSDERDDVPLIYILKH------------- 120
P S PT +N+SNMDSD+RDDVPL +LK
Sbjct: 61 PESVPVVGESSIPTSSVADAPRVPATNVSNMDSDDRDDVPLARLLKKTMIPDVADKLHVD 120
Query: 121 --------------GVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKD 180
GVF P PD +P TS V P PS P S S D
Sbjct: 121 PPSFIHSQESSSTKGVF--IPTPD--IPSTSNVQPGPSAHSPPASPPLFSSVNAHKSVPD 180
Query: 181 DDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKG------NEASRDIIDPVSDV 240
L NI G+ + H V E E Q P+ G N+ + ++ P S
Sbjct: 181 AVLGNI-SGAPVRHPNDREV--------EDEVEPQHPDIGTEEVPLNDDNNLVVPPASAD 240
Query: 241 GEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIV 280
+KA + + ITTKTG +K+PPNIPSIPIDGISFH EESV WK+V+QRRI
Sbjct: 241 IPAASNPAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIA 300
BLAST of IVF0020304 vs. NCBI nr
Match:
KAA0066501.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK06140.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])
HSP 1 Score: 158 bits (400), Expect = 2.93e-44
Identity = 96/193 (49.74%), Postives = 112/193 (58.03%), Query Frame = 0
Query: 55 VLPSDPTKEFLFTD-------------PSNLSNMDSDERDDVPLIYILKHGVFGKNPQPD 114
V PS+PT+E LF D SN+S++DS+ERDD+PLI+ILK GVF
Sbjct: 23 VPPSNPTEESLFPDLVGSNVPENVRNHESNVSDIDSNERDDIPLIHILKRGVFA------ 82
Query: 115 SSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHS 174
HV+PE VPTS+N A EH
Sbjct: 83 ------------------------------------------HVEPESVPTSDNRAPEHP 142
Query: 175 TEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPI 234
TEVQEPNK +EA RDI DPVSDVG D PQKK+RKA PKV+TTKTG RKVPPN+PS+ I
Sbjct: 143 TEVQEPNKNDEAGRDIPDPVSDVGADLPQKKARKALDCPKVVTTKTGCRKVPPNVPSVSI 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DU39 | 3.4e-126 | 85.36 | Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
A0A5A7UT97 | 1.8e-71 | 59.32 | Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
A0A5D3DR14 | 1.1e-39 | 38.79 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CDC6 | 1.1e-39 | 38.79 | uncharacterized protein LOC103499143 OS=Cucumis melo OX=3656 GN=LOC103499143 PE=... | [more] |
A0A5D3BZR7 | 1.8e-39 | 42.41 | Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
Match Name | E-value | Identity | Description | |
TYK27163.1 | 4.03e-160 | 85.36 | cell wall protein RBR3-like [Cucumis melo var. makuwa] | [more] |
KAA0056755.1 | 4.18e-88 | 59.32 | cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYK21011.1 cell wall pro... | [more] |
KAA0036711.1 | 6.04e-46 | 42.71 | cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYK03686.1 cell wall pro... | [more] |
XP_008460264.1 | 1.27e-45 | 40.18 | PREDICTED: uncharacterized protein LOC103499143 [Cucumis melo] >KAA0037815.1 unc... | [more] |
KAA0066501.1 | 2.93e-44 | 49.74 | flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK06140.1 flocculat... | [more] |
Match Name | E-value | Identity | Description | |