IVF0020304 (gene) Melon (IVF77) v1

Overview
NameIVF0020304
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCell wall protein RBR3-like
Locationchr06: 11688511 .. 11689449 (+)
RNA-Seq ExpressionIVF0020304
SyntenyIVF0020304
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAATACTCGTCGAGGGAAGTATCAAGTTCATTTAACCCCAATTGGTTCTGAAGATGATAACTCCATAACGAACATGCACAATGTTCGAATGAGAAGGAATCGATTCAAAACTACTCCTTATATGCGTCCTTATCGACTACCATCTGAACGAAATCATGTATTACCTTCTGATCCCACTAAGGAGTTTTTGTTTACTGATCCTGTTTAGTTGAATGTTTCTGAGAATGTTGGACATTATGAGTCCAATTTATCTAATATGGACTCAGATGAGAGGGATGATGTACCTCTCATTTATATTTTGAAGCATGGGGTGTTTGGCAAAAATCCTCAACCAGATAGTAGTGTTCCTGGTACCTCTACTGTTGTTCCCTCTCCAAGTGTTCCCTTTGTATCACTGCACTTCACGAGTAGTTCTTCAAAGGATGATGTTCTACCTTCGAATGAACCATAACATTCAGGTGAAAATCTAGAAAATCTATCCTAGGATTTAGTTAATATTGATCAAGGATCTAATTTGTCACATGTTAAGCCAGAATTAGTTCCTACATCTGAAAACCCTGCATCTGAACATTCTACTGAAGTTCAAGAACCTAATAAGGGAAATGAAGCGAGCAGAGATATTATTGACCCTGTATCTGATGTTGGTGAGGATCGTCCTCAGAAGAAATCTAGGAAGGCTTCAACTCGTCCTAAAGTCATTACTACAAAAACTGGACATCGTAAAGTACCCCCAAACATTCCATCTATTCCCATTGATGGAATATCGTTCCACCTTGAAGAGAGTGTGCACAAGTGGAAATATGTAGTTCAGAGGAGAATTGTTGACGAAGTTAACATATCTGACAAACATCACTCTTATCTAAGTGTAATGGACTTGGAGATTCAAGCTGGCCTTTCCAAAACCATCTTCAATGTGGGGCAATTTTATCCTTAA

mRNA sequence

ATGGTGAATACTCGTCGAGGGAAGTATCAAGTTCATTTAACCCCAATTGGTTCTGAAGATGATAACTCCATAACGAACATGCACAATGTTCGAATGAGAAGGAATCGATTCAAAACTACTCCTTATATGCGTCCTTATCGACTACCATCTGAACGAAATCATGTATTACCTTCTGATCCCACTAAGGAGTTTTTGTTTACTGATCCTTCCAATTTATCTAATATGGACTCAGATGAGAGGGATGATGTACCTCTCATTTATATTTTGAAGCATGGGGTGTTTGGCAAAAATCCTCAACCAGATAGTAGTGTTCCTGGTACCTCTACTGTTGTTCCCTCTCCAAGTGTTCCCTTTGTATCACTGCACTTCACGAGTAGTTCTTCAAAGGATGATGATTTAGTTAATATTGATCAAGGATCTAATTTGTCACATGTTAAGCCAGAATTAGTTCCTACATCTGAAAACCCTGCATCTGAACATTCTACTGAAGTTCAAGAACCTAATAAGGGAAATGAAGCGAGCAGAGATATTATTGACCCTGTATCTGATGTTGGTGAGGATCGTCCTCAGAAGAAATCTAGGAAGGCTTCAACTCGTCCTAAAGTCATTACTACAAAAACTGGACATCGTAAAGTACCCCCAAACATTCCATCTATTCCCATTGATGGAATATCGTTCCACCTTGAAGAGAGTGTGCACAAGTGGAAATATGTAGTTCAGAGGAGAATTGTTGACGAAGTTAACATATCTGACAAACATCACTCTTATCTAAGTGTAATGGACTTGGAGATTCAAGCTGGCCTTTCCAAAACCATCTTCAATGTGGGGCAATTTTATCCTTAA

Coding sequence (CDS)

ATGGTGAATACTCGTCGAGGGAAGTATCAAGTTCATTTAACCCCAATTGGTTCTGAAGATGATAACTCCATAACGAACATGCACAATGTTCGAATGAGAAGGAATCGATTCAAAACTACTCCTTATATGCGTCCTTATCGACTACCATCTGAACGAAATCATGTATTACCTTCTGATCCCACTAAGGAGTTTTTGTTTACTGATCCTTCCAATTTATCTAATATGGACTCAGATGAGAGGGATGATGTACCTCTCATTTATATTTTGAAGCATGGGGTGTTTGGCAAAAATCCTCAACCAGATAGTAGTGTTCCTGGTACCTCTACTGTTGTTCCCTCTCCAAGTGTTCCCTTTGTATCACTGCACTTCACGAGTAGTTCTTCAAAGGATGATGATTTAGTTAATATTGATCAAGGATCTAATTTGTCACATGTTAAGCCAGAATTAGTTCCTACATCTGAAAACCCTGCATCTGAACATTCTACTGAAGTTCAAGAACCTAATAAGGGAAATGAAGCGAGCAGAGATATTATTGACCCTGTATCTGATGTTGGTGAGGATCGTCCTCAGAAGAAATCTAGGAAGGCTTCAACTCGTCCTAAAGTCATTACTACAAAAACTGGACATCGTAAAGTACCCCCAAACATTCCATCTATTCCCATTGATGGAATATCGTTCCACCTTGAAGAGAGTGTGCACAAGTGGAAATATGTAGTTCAGAGGAGAATTGTTGACGAAGTTAACATATCTGACAAACATCACTCTTATCTAAGTGTAATGGACTTGGAGATTCAAGCTGGCCTTTCCAAAACCATCTTCAATGTGGGGCAATTTTATCCTTAA

Protein sequence

MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP
Homology
BLAST of IVF0020304 vs. ExPASy TrEMBL
Match: A0A5D3DU39 (Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00080 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.4e-126
Identity = 239/280 (85.36%), Postives = 243/280 (86.79%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDP 60
           MVNTRRGKYQVHLTPIGSEDD+SITNMHNVRMRRNRFKTTPYMRPYRLPSERNH      
Sbjct: 1   MVNTRRGKYQVHLTPIGSEDDSSITNMHNVRMRRNRFKTTPYMRPYRLPSERNH------ 60

Query: 61  TKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVS 120
                    SNLSNMDSDERDDVPLIYILK GVFGKNPQPDSSVPGTSTVVPSPS    +
Sbjct: 61  ---------SNLSNMDSDERDDVPLIYILKRGVFGKNPQPDSSVPGTSTVVPSPSENLEN 120

Query: 121 LHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDP 180
           L          DLVNIDQGSN SHVKPE VPTSENP SEHS EVQEPNKGNEASRDI+DP
Sbjct: 121 L--------SQDLVNIDQGSNSSHVKPESVPTSENPTSEHSIEVQEPNKGNEASRDILDP 180

Query: 181 VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQ 240
           VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVH+WKYVVQ
Sbjct: 181 VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHRWKYVVQ 240

Query: 241 RRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP 281
           RR  DEVNISDKHHS LSVMDLEIQAGLSKTIFNVGQFYP
Sbjct: 241 RRFADEVNISDKHHSCLSVMDLEIQAGLSKTIFNVGQFYP 257

BLAST of IVF0020304 vs. ExPASy TrEMBL
Match: A0A5A7UT97 (Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold778G00020 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.8e-71
Identity = 156/263 (59.32%), Postives = 189/263 (71.86%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDP 60
           MVNTRR KYQV  T IGSEDD+S TNMH+VR+R  +FKTTP  RPYRLPS++N V PSDP
Sbjct: 1   MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDP 60

Query: 61  TKEFLFTDP-------------SNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGT 120
           TK+ LF+DP             S+LS+MD ++RD+VPL +ILK GVFGKN Q DS VP  
Sbjct: 61  TKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKNTQLDSDVPCA 120

Query: 121 STVVPSPSVPFVSLHFTSSSSKDDDLV----------------NIDQGSNLSHVKPELVP 180
           S+VV SPS  FVSLHFTSSSS +D                   N+DQ SN +HV+PE +P
Sbjct: 121 SSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIP 180

Query: 181 TSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRK 235
            S+N A EH +EVQE ++ NEASRDI +P+SD+GED PQKK+RKAS R K ITTKTG RK
Sbjct: 181 ASDNRAPEHPSEVQELDQENEASRDIPNPISDMGEDHPQKKARKASARAKDITTKTGRRK 240

BLAST of IVF0020304 vs. ExPASy TrEMBL
Match: A0A5D3DR14 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00670 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 128/330 (38.79%), Postives = 164/330 (49.70%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHV----- 60
           MVNTR+G Y    +    E   S   +  V++R  RFK+TP  R YRLPSE++ +     
Sbjct: 1   MVNTRKGSYMTQPSEDAPEVTISSPPIRQVKVRGQRFKSTPPRRSYRLPSEKSLLHESVL 60

Query: 61  -----------LPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILK-------------- 120
                      +P+    +      +N+SNMDSD+RDDVPL  +LK              
Sbjct: 61  PESVPVVGESSIPTSSVADAPRVPATNVSNMDSDDRDDVPLARLLKKTMIPDVADKLHVD 120

Query: 121 -------------HGVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKD 180
                         GVF   P PD  +P TS V P PS        P  S      S  D
Sbjct: 121 PPSFIHSQESSSTKGVF--IPTPD--IPSTSNVQPGPSAHSPPASPPLFSSVNAHKSVPD 180

Query: 181 DDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQ 240
             L NI  G+ + H     V     P  +H     E    N+ +  ++ P S        
Sbjct: 181 AVLGNI-SGAPVRHPNDREVEDEVEP--QHPDIGTEEVPLNDDNNLVVPPASADIPAASN 240

Query: 241 KKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNIS 281
              +KA  + + ITTKTG +K+PPNIPSIPIDGISFH EESV  WK+V+QRRI DEVN+S
Sbjct: 241 PAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIADEVNVS 300

BLAST of IVF0020304 vs. ExPASy TrEMBL
Match: A0A1S3CDC6 (uncharacterized protein LOC103499143 OS=Cucumis melo OX=3656 GN=LOC103499143 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 128/330 (38.79%), Postives = 164/330 (49.70%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHV----- 60
           MVNTR+G Y    +    E   S   +  V++R  RFK+TP  R YRLPSE++ +     
Sbjct: 1   MVNTRKGSYMTQPSEDAPEVTISSPPIRQVKVRGQRFKSTPPRRSYRLPSEKSLLHESVL 60

Query: 61  -----------LPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILK-------------- 120
                      +P+    +      +N+SNMDSD+RDDVPL  +LK              
Sbjct: 61  PESVPVVGESSIPTSSVADAPRVPATNVSNMDSDDRDDVPLARLLKKTMIPDVADKLHVD 120

Query: 121 -------------HGVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKD 180
                         GVF   P PD  +P TS V P PS        P  S      S  D
Sbjct: 121 PPSFIHSQESSSTKGVF--IPTPD--IPSTSNVQPGPSAHSPPASPPLFSSVNAHKSVPD 180

Query: 181 DDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQ 240
             L NI  G+ + H     V     P  +H     E    N+ +  ++ P S        
Sbjct: 181 AVLGNI-SGAPVRHPNDREVEDEVEP--QHPDIGTEEVPLNDDNNLVVPPASADIPAASN 240

Query: 241 KKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIVDEVNIS 281
              +KA  + + ITTKTG +K+PPNIPSIPIDGISFH EESV  WK+V+QRRI DEVN+S
Sbjct: 241 PAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIADEVNVS 300

BLAST of IVF0020304 vs. ExPASy TrEMBL
Match: A0A5D3BZR7 (Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00460 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39
Identity = 123/290 (42.41%), Postives = 149/290 (51.38%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRP--YRLPSERNHVLPS 60
           MVNTRRGKYQ   T +G ED ++ TNMH VRMR    K      P  YRL          
Sbjct: 1   MVNTRRGKYQTRSTSVGFEDVSTKTNMHGVRMRGINSKLPHLDVPTVYRL---------- 60

Query: 61  DPTKEFLFTDPSNLSNMDSDE--------RDDVPLIYILKHGVFGKNPQPDSSVPGTSTV 120
              KE  +  P  L ++  D+           V L+ ++       N Q +         
Sbjct: 61  ---KEVTYHLPILLRSLLHDDLVFPLFLCTSRVALLRMISSLRMCHNTQVE--------- 120

Query: 121 VPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKG 180
                   + L   +S        NIDQGSN SHV+PE +P  E+PASE           
Sbjct: 121 --------MCLKVRTSD-------NIDQGSNPSHVEPESIPNIEHPASE----------- 180

Query: 181 NEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEE 240
                            +P +KS+K S RPKVITTKT  RKVP NI S+ +DGISFHLEE
Sbjct: 181 -----------------QPIEKSKKTSARPKVITTKTSRRKVPLNILSVLLDGISFHLEE 225

Query: 241 SVHKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP 281
           SV +WKYVVQRRI DEVN+SDKHHS LS+M+L I+ GLSKT  NVG FYP
Sbjct: 241 SVQRWKYVVQRRITDEVNVSDKHHSCLSIMNLVIKVGLSKTNSNVGPFYP 225

BLAST of IVF0020304 vs. NCBI nr
Match: TYK27163.1 (cell wall protein RBR3-like [Cucumis melo var. makuwa])

HSP 1 Score: 455 bits (1171), Expect = 4.03e-160
Identity = 239/280 (85.36%), Postives = 243/280 (86.79%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDP 60
           MVNTRRGKYQVHLTPIGSEDD+SITNMHNVRMRRNRFKTTPYMRPYRLPSERNH      
Sbjct: 1   MVNTRRGKYQVHLTPIGSEDDSSITNMHNVRMRRNRFKTTPYMRPYRLPSERNH------ 60

Query: 61  TKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVPSPSVPFVS 120
                    SNLSNMDSDERDDVPLIYILK GVFGKNPQPDSSVPGTSTVVPSPS    +
Sbjct: 61  ---------SNLSNMDSDERDDVPLIYILKRGVFGKNPQPDSSVPGTSTVVPSPSENLEN 120

Query: 121 LHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNEASRDIIDP 180
           L          DLVNIDQGSN SHVKPE VPTSENP SEHS EVQEPNKGNEASRDI+DP
Sbjct: 121 L--------SQDLVNIDQGSNSSHVKPESVPTSENPTSEHSIEVQEPNKGNEASRDILDP 180

Query: 181 VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQ 240
           VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVH+WKYVVQ
Sbjct: 181 VSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHRWKYVVQ 240

Query: 241 RRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP 280
           RR  DEVNISDKHHS LSVMDLEIQAGLSKTIFNVGQFYP
Sbjct: 241 RRFADEVNISDKHHSCLSVMDLEIQAGLSKTIFNVGQFYP 257

BLAST of IVF0020304 vs. NCBI nr
Match: KAA0056755.1 (cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYK21011.1 cell wall protein RBR3-like [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (698), Expect = 4.18e-88
Identity = 156/263 (59.32%), Postives = 189/263 (71.86%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERNHVLPSDP 60
           MVNTRR KYQV  T IGSEDD+S TNMH+VR+R  +FKTTP  RPYRLPS++N V PSDP
Sbjct: 1   MVNTRREKYQVRSTSIGSEDDSSRTNMHDVRIRGYQFKTTPSRRPYRLPSKQNQVSPSDP 60

Query: 61  TKEFLFTDP-------------SNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGT 120
           TK+ LF+DP             S+LS+MD ++RD+VPL +ILK GVFGKN Q DS VP  
Sbjct: 61  TKDSLFSDPVDSVVPENVGHHESDLSDMDPNKRDNVPLFHILKRGVFGKNTQLDSDVPCA 120

Query: 121 STVVPSPSVPFVSLHFTSSSSKDDDLV----------------NIDQGSNLSHVKPELVP 180
           S+VV SPS  FVSLHFTSSSS +D                   N+DQ SN +HV+PE +P
Sbjct: 121 SSVVSSPSGHFVSLHFTSSSSNNDIPASNEPHHSSDNLSQCPDNVDQESNPTHVEPESIP 180

Query: 181 TSENPASEHSTEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRK 234
            S+N A EH +EVQE ++ NEASRDI +P+SD+GED PQKK+RKAS R K ITTKTG RK
Sbjct: 181 ASDNRAPEHPSEVQELDQENEASRDIPNPISDMGEDHPQKKARKASARAKDITTKTGRRK 240

BLAST of IVF0020304 vs. NCBI nr
Match: KAA0036711.1 (cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYK03686.1 cell wall protein RBR3-like [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (426), Expect = 6.04e-46
Identity = 123/288 (42.71%), Postives = 145/288 (50.35%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRP--YRLPSERNHV--- 60
           MVNTRRGKYQ   T +G ED ++ TNMH VRMR    K      P  YRL     H+   
Sbjct: 1   MVNTRRGKYQTRSTSVGFEDVSTKTNMHGVRMRGINSKLPHLDVPTVYRLKEVTYHLPIL 60

Query: 61  ---LPSDPTKEFLFTDPSNLSNMDSDERDDVPLIYILKHGVFGKNPQPDSSVPGTSTVVP 120
              L  D     LF   S            V L+ ++       N Q +  +        
Sbjct: 61  LRSLLHDDLVFPLFLCTSR-----------VALLRMISSLRMCHNTQVEMCL-------- 120

Query: 121 SPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKGNE 180
                           K     NIDQGSN SHV+PE +P  E+PASE             
Sbjct: 121 ----------------KVRTSDNIDQGSNPSHVEPESIPNIEHPASE------------- 180

Query: 181 ASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESV 240
                          +P +KS+K S RPKVITTKT  RKVP NI S+ +DGISFHLEESV
Sbjct: 181 ---------------QPIEKSKKTSARPKVITTKTSRRKVPLNILSVLLDGISFHLEESV 225

Query: 241 HKWKYVVQRRIVDEVNISDKHHSYLSVMDLEIQAGLSKTIFNVGQFYP 280
            +WKYVVQRRI DEVN+SDKHHS LS+M+L I+ GLSKT  NVG FYP
Sbjct: 241 QRWKYVVQRRITDEVNVSDKHHSCLSIMNLVIKVGLSKTNSNVGPFYP 225

BLAST of IVF0020304 vs. NCBI nr
Match: XP_008460264.1 (PREDICTED: uncharacterized protein LOC103499143 [Cucumis melo] >KAA0037815.1 uncharacterized protein E6C27_scaffold4066G00050 [Cucumis melo var. makuwa] >TYK26046.1 uncharacterized protein E5676_scaffold1567G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 169 bits (427), Expect = 1.27e-45
Identity = 135/336 (40.18%), Postives = 167/336 (49.70%), Query Frame = 0

Query: 1   MVNTRRGKYQVHLTPIGSEDDNSITNMHNVRMRRNRFKTTPYMRPYRLPSERN----HVL 60
           MVNTR+G Y    +    E   S   +  V++R  RFK+TP  R YRLPSE++     VL
Sbjct: 1   MVNTRKGSYMTQPSEDAPEVTISSPPIRQVKVRGQRFKSTPPRRSYRLPSEKSLLHESVL 60

Query: 61  P---------SDPTKEFLFTD---PSNLSNMDSDERDDVPLIYILKH------------- 120
           P         S PT           +N+SNMDSD+RDDVPL  +LK              
Sbjct: 61  PESVPVVGESSIPTSSVADAPRVPATNVSNMDSDDRDDVPLARLLKKTMIPDVADKLHVD 120

Query: 121 --------------GVFGKNPQPDSSVPGTSTVVPSPSV-------PFVSLHFTSSSSKD 180
                         GVF   P PD  +P TS V P PS        P  S      S  D
Sbjct: 121 PPSFIHSQESSSTKGVF--IPTPD--IPSTSNVQPGPSAHSPPASPPLFSSVNAHKSVPD 180

Query: 181 DDLVNIDQGSNLSHVKPELVPTSENPASEHSTEVQEPNKG------NEASRDIIDPVSDV 240
             L NI  G+ + H     V        E   E Q P+ G      N+ +  ++ P S  
Sbjct: 181 AVLGNI-SGAPVRHPNDREV--------EDEVEPQHPDIGTEEVPLNDDNNLVVPPASAD 240

Query: 241 GEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPIDGISFHLEESVHKWKYVVQRRIV 280
                    +KA  + + ITTKTG +K+PPNIPSIPIDGISFH EESV  WK+V+QRRI 
Sbjct: 241 IPAASNPAEKKAQQKRRNITTKTGWKKIPPNIPSIPIDGISFHHEESVQCWKFVMQRRIA 300

BLAST of IVF0020304 vs. NCBI nr
Match: KAA0066501.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK06140.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (400), Expect = 2.93e-44
Identity = 96/193 (49.74%), Postives = 112/193 (58.03%), Query Frame = 0

Query: 55  VLPSDPTKEFLFTD-------------PSNLSNMDSDERDDVPLIYILKHGVFGKNPQPD 114
           V PS+PT+E LF D              SN+S++DS+ERDD+PLI+ILK GVF       
Sbjct: 23  VPPSNPTEESLFPDLVGSNVPENVRNHESNVSDIDSNERDDIPLIHILKRGVFA------ 82

Query: 115 SSVPGTSTVVPSPSVPFVSLHFTSSSSKDDDLVNIDQGSNLSHVKPELVPTSENPASEHS 174
                                                     HV+PE VPTS+N A EH 
Sbjct: 83  ------------------------------------------HVEPESVPTSDNRAPEHP 142

Query: 175 TEVQEPNKGNEASRDIIDPVSDVGEDRPQKKSRKASTRPKVITTKTGHRKVPPNIPSIPI 234
           TEVQEPNK +EA RDI DPVSDVG D PQKK+RKA   PKV+TTKTG RKVPPN+PS+ I
Sbjct: 143 TEVQEPNKNDEAGRDIPDPVSDVGADLPQKKARKALDCPKVVTTKTGCRKVPPNVPSVSI 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DU393.4e-12685.36Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7UT971.8e-7159.32Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3DR141.1e-3938.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CDC61.1e-3938.79uncharacterized protein LOC103499143 OS=Cucumis melo OX=3656 GN=LOC103499143 PE=... [more]
A0A5D3BZR71.8e-3942.41Cell wall protein RBR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
Match NameE-valueIdentityDescription
TYK27163.14.03e-16085.36cell wall protein RBR3-like [Cucumis melo var. makuwa][more]
KAA0056755.14.18e-8859.32cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYK21011.1 cell wall pro... [more]
KAA0036711.16.04e-4642.71cell wall protein RBR3-like [Cucumis melo var. makuwa] >TYK03686.1 cell wall pro... [more]
XP_008460264.11.27e-4540.18PREDICTED: uncharacterized protein LOC103499143 [Cucumis melo] >KAA0037815.1 unc... [more]
KAA0066501.12.93e-4449.74flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK06140.1 flocculat... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0020304.1IVF0020304.1mRNA