IVF0020241 (gene) Melon (IVF77) v1

Overview


Name	IVF0020241
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	TTF-type domain-containing protein
Location	chr06: 21159144 .. 21159668 (+)
RNA-Seq Expression	IVF0020241
Synteny	IVF0020241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACTTCAAGAGTCAAATAATCGTTTCACTGAGAAAAGCACCGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTGCTTTTGACAGACAAAAGCTCATTTGCCTTGCACAATTTTATCCTCGAGATTTTTCAACTACGGAGCTTCTTATTCTTGAAGATCAGCTTCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTCGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGATAACAGCTAAGGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTGCCAGTTACAATGGCTACCGTGGAGAGGACATTTTCTGCTATGAGCATTATAAAGACTCAGTTGCGTAATCGAATGGAAGACCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGTTATTATGTATCGATTTCAAAATATGAAATCTCGTAGGGGACAATTGTAA

mRNA sequence

ATGCAACTTCAAGAGTCAAATAATCGTTTCACTGAGAAAAGCACCGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTGCTTTTGACAGACAAAAGCTCATTTGCCTTGCACAATTTTATCCTCGAGATTTTTCAACTACGGAGCTTCTTATTCTTGAAGATCAGCTTCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTCGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGATAACAGCTAAGGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTGCCAGTTACAATGGCTACCGTGGAGAGGACATTTTCTGCTATGAGCATTATAAAGACTCAGTTGCGTAATCGAATGGAAGACCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGTTATTATGTATCGATTTCAAAATATGAAATCTCGTAGGGGACAATTGTAA

Coding sequence (CDS)

ATGCAACTTCAAGAGTCAAATAATCGTTTCACTGAGAAAAGCACCGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTGCTTTTGACAGACAAAAGCTCATTTGCCTTGCACAATTTTATCCTCGAGATTTTTCAACTACGGAGCTTCTTATTCTTGAAGATCAGCTTCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTCGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGATAACAGCTAAGGATAAAGTTTACCCATTAGTCTATCGGTTGCTTACCTTAGCATTGATCTTGCCAGTTACAATGGCTACCGTGGAGAGGACATTTTCTGCTATGAGCATTATAAAGACTCAGTTGCGTAATCGAATGGAAGACCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTATTTGATAAGATAGATAATGAAGTTATTATGTATCGATTTCAAAATATGAAATCTCGTAGGGGACAATTGTAA

Protein sequence

MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTFSAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL

Homology

[Close]

BLAST of IVF0020241 vs. ExPASy TrEMBL
Match: A0A1S3BM43 (uncharacterized protein LOC103491145 OS=Cucumis melo OX=3656 GN=LOC103491145 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.2e-82
Identity = 159/174 (91.38%), Postives = 163/174 (93.68%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           MQLQE NN FTEKSTELLLCVACLNPSNSFT FD+QKLIC+AQFYPRDFST ELLI EDQ
Sbjct: 140 MQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPRDFSTMELLIFEDQ 199

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           LQNYIIDVCSDNMFVGLTSIGD SQKMVITAKDKVYPLVYRLLTLALILPVT ATV+R F
Sbjct: 200 LQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLALILPVTTATVKRIF 259

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 175
           SAMSIIKTQ R RM+DQWMNDCLVAYIERDLFDKIDNE IMYRFQNMKSRRGQL
Sbjct: 260 SAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNMKSRRGQL 313

[Close]

BLAST of IVF0020241 vs. ExPASy TrEMBL
Match: A0A5D3BMQ7 (Copia-type polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00190 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.8e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ
Sbjct: 95  MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 154

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF
Sbjct: 155 LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 214

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNE 159
           SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNE
Sbjct: 215 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNE 252

[Close]

BLAST of IVF0020241 vs. ExPASy TrEMBL
Match: A0A6P5TRY7 (uncharacterized protein LOC110770113 OS=Prunus avium OX=42229 GN=LOC110770113 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.9e-60
Identity = 121/174 (69.54%), Postives = 147/174 (84.48%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           +QL+E N+RF EK+TELLLC+ACL+PSNSF+AFD+ KL+ LAQFY RDFS  +L +LEDQ
Sbjct: 243 IQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYQRDFSEHDLKLLEDQ 302

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           L+NYI DV S+N F  L  I DL+QKMV T KDK+YPLVY LLTLALILPV  A+VER F
Sbjct: 303 LENYIWDVSSNNQFTELKGITDLAQKMVETNKDKIYPLVYLLLTLALILPVATASVERVF 362

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 175
           SAM+I+K +LRNR+ D WMNDCLVAYIE+D+F+ ID+EV+M RFQNMK+RRGQL
Sbjct: 363 SAMNIVKNRLRNRIGDLWMNDCLVAYIEKDIFNSIDDEVVMQRFQNMKTRRGQL 416

[Close]

BLAST of IVF0020241 vs. ExPASy TrEMBL
Match: A0A6P5TKH2 (zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110768262 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.9e-59
Identity = 121/174 (69.54%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           +QL+E N+RF EK+TELLLC+ACL+PSNSF+AFD+ KL+ LAQFYPRDFS  +L +LEDQ
Sbjct: 291 IQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYPRDFSKHDLKLLEDQ 350

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           L+NYI DV S+N F  L  I DL+QKMV T KDK+YPLVY LLTLALIL V  A+VER F
Sbjct: 351 LENYIWDVSSNNEFTELKGISDLAQKMVETNKDKIYPLVYLLLTLALILSVATASVERVF 410

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 175
           SAM+I+K +LRNRM D WMND LVAYIE+D+F+ ID+EV+M RFQNMK+RRGQL
Sbjct: 411 SAMNIVKNRLRNRMGDLWMNDSLVAYIEKDIFNSIDDEVVMQRFQNMKTRRGQL 464

[Close]

BLAST of IVF0020241 vs. ExPASy TrEMBL
Match: A0A2N9J031 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57563 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.0e-56
Identity = 119/174 (68.39%), Postives = 137/174 (78.74%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           MQLQE NNRFTE +TELLLCV+CL+PS+ F  FD+QKLI LAQFYP DFS++EL+IL DQ
Sbjct: 544 MQLQELNNRFTESNTELLLCVSCLSPSDFFATFDKQKLIRLAQFYPEDFSSSELMILSDQ 603

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           L NYI DV S   F  L  I DL+QKMV T K+ VYPLVY L+TLAL LPV  ATVER F
Sbjct: 604 LDNYIFDVRSSIEFSKLEGICDLAQKMVETKKNVVYPLVYLLVTLALTLPVATATVERAF 663

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 175
           SAM I+K +LR+RM DQWMND L+ YIE+D+F  IDNE IM RFQNMK+RR QL
Sbjct: 664 SAMKIVKNRLRSRMSDQWMNDSLIVYIEKDIFHSIDNEAIMQRFQNMKTRRNQL 717

[Close]

BLAST of IVF0020241 vs. NCBI nr
Match: XP_008449194.1 (PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo])

HSP 1 Score: 315 bits (806), Expect = 1.48e-105
Identity = 159/174 (91.38%), Postives = 163/174 (93.68%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           MQLQE NN FTEKSTELLLCVACLNPSNSFT FD+QKLIC+AQFYPRDFST ELLI EDQ
Sbjct: 140 MQLQELNNHFTEKSTELLLCVACLNPSNSFTTFDKQKLICIAQFYPRDFSTMELLIFEDQ 199

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           LQNYIIDVCSDNMFVGLTSIGD SQKMVITAKDKVYPLVYRLLTLALILPVT ATV+R F
Sbjct: 200 LQNYIIDVCSDNMFVGLTSIGDFSQKMVITAKDKVYPLVYRLLTLALILPVTTATVKRIF 259

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 174
           SAMSIIKTQ R RM+DQWMNDCLVAYIERDLFDKIDNE IMYRFQNMKSRRGQL
Sbjct: 260 SAMSIIKTQFRTRMKDQWMNDCLVAYIERDLFDKIDNEAIMYRFQNMKSRRGQL 313

[Close]

BLAST of IVF0020241 vs. NCBI nr
Match: TYK00355.1 (copia-type polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 309 bits (791), Expect = 1.21e-101
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ
Sbjct: 95  MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 154

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF
Sbjct: 155 LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 214

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNE 158
           SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNE
Sbjct: 215 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNE 252

[Close]

BLAST of IVF0020241 vs. NCBI nr
Match: XP_021829887.1 (uncharacterized protein LOC110770113 [Prunus avium])

HSP 1 Score: 240 bits (612), Expect = 8.20e-75
Identity = 121/174 (69.54%), Postives = 147/174 (84.48%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           +QL+E N+RF EK+TELLLC+ACL+PSNSF+AFD+ KL+ LAQFY RDFS  +L +LEDQ
Sbjct: 243 IQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYQRDFSEHDLKLLEDQ 302

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           L+NYI DV S+N F  L  I DL+QKMV T KDK+YPLVY LLTLALILPV  A+VER F
Sbjct: 303 LENYIWDVSSNNQFTELKGITDLAQKMVETNKDKIYPLVYLLLTLALILPVATASVERVF 362

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 174
           SAM+I+K +LRNR+ D WMNDCLVAYIE+D+F+ ID+EV+M RFQNMK+RRGQL
Sbjct: 363 SAMNIVKNRLRNRIGDLWMNDCLVAYIEKDIFNSIDDEVVMQRFQNMKTRRGQL 416

[Close]

BLAST of IVF0020241 vs. NCBI nr
Match: XP_021827657.1 (zinc finger MYM-type protein 1-like [Prunus avium])

HSP 1 Score: 238 bits (606), Expect = 2.35e-73
Identity = 121/174 (69.54%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           +QL+E N+RF EK+TELLLC+ACL+PSNSF+AFD+ KL+ LAQFYPRDFS  +L +LEDQ
Sbjct: 291 IQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYPRDFSKHDLKLLEDQ 350

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           L+NYI DV S+N F  L  I DL+QKMV T KDK+YPLVY LLTLALIL V  A+VER F
Sbjct: 351 LENYIWDVSSNNEFTELKGISDLAQKMVETNKDKIYPLVYLLLTLALILSVATASVERVF 410

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 174
           SAM+I+K +LRNRM D WMND LVAYIE+D+F+ ID+EV+M RFQNMK+RRGQL
Sbjct: 411 SAMNIVKNRLRNRMGDLWMNDSLVAYIEKDIFNSIDDEVVMQRFQNMKTRRGQL 464

[Close]

BLAST of IVF0020241 vs. NCBI nr
Match: XP_039684545.1 (zinc finger MYM-type protein 1-like [Medicago truncatula] >XP_039684546.1 zinc finger MYM-type protein 1-like [Medicago truncatula])

HSP 1 Score: 225 bits (574), Expect = 2.17e-70
Identity = 116/173 (67.05%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 2   QLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQL 61
           QLQE NN F+E +TELLLCVACLNP +SF+AFD++ LI LA+FYP +FS  +LL L+ QL
Sbjct: 139 QLQELNNHFSEVNTELLLCVACLNPRDSFSAFDKKNLIRLAEFYPSEFSPVQLLELDSQL 198

Query: 62  QNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTFS 121
           +NYI+DVCS++ F  L  IGDLS KMV T +  VYPLVY LL L+LILPV  AT ER FS
Sbjct: 199 ENYIVDVCSEDAFYELEGIGDLSIKMVETRRHIVYPLVYLLLQLSLILPVATATAERAFS 258

Query: 122 AMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 174
           AM IIKTQLRNRM DQW+NDCLV YIER++F +I+NE I+  FQNM SRRGQL
Sbjct: 259 AMKIIKTQLRNRMGDQWLNDCLVTYIEREIFIEIENEKIIRYFQNMTSRRGQL 311

[Close]

BLAST of IVF0020241 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 164.5 bits (415), Expect = 7.8e-41
Identity = 86/174 (49.43%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           MQLQE N+RF E ++ELL+C++ L+P +SF  FD+  L+ L +FYP DFS  E   L+ Q
Sbjct: 596 MQLQEFNDRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQ 655

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           L+ Y+ +V +D  F  L  +GDL++ MV T K   +PLVYRLL ++LILPV  ATVER F
Sbjct: 656 LEIYLDNVKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVERCF 715

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 175
           SAM+ +KT LRNR+ D +++DCLV +IE+   + + NE ++ RFQ+M  RR  L
Sbjct: 716 SAMNFVKTTLRNRIGDMFLSDCLVCFIEKQALNTVTNESVIKRFQDMSERRVHL 769

[Close]

BLAST of IVF0020241 vs. TAIR 10
Match: AT3G29765.1 (General transcription factor 2-related zinc finger protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-39
Identity = 85/174 (48.85%), Postives = 119/174 (68.39%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           MQLQE N+ F E ++ELL+C++ L+P +SF  FD+  L+ L +FYP DFS  E   L+ Q
Sbjct: 363 MQLQEFNDCFDELNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQ 422

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           L+ Y+ +V +D  F  L  +GDL++ MV T K   +PLVYRLL L+LILPV  ATV R F
Sbjct: 423 LEIYLDNVKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVVRCF 482

Query: 121 SAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSRRGQL 175
           SAM+ +KT LRNR  D +++DCLV +IE+ + + + NE ++ RFQ+M  RR  L
Sbjct: 483 SAMNFVKTTLRNRFGDVFLSDCLVCFIEKQVLNTVTNESVIKRFQDMSERRVHL 536

[Close]

BLAST of IVF0020241 vs. TAIR 10
Match: AT2G06541.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-36
Identity = 80/168 (47.62%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 3   LQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQLQ 62
           L E N+ F E +TELL CVA L+P++ F  FD+ K++ LA+FYP+DF+  +   LE QL 
Sbjct: 422 LLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEHQLG 481

Query: 63  NYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTFSA 122
            YI ++  D+ F  L S+GDL++ M+ T K   +P VYRLL + L LP+  ATVER FSA
Sbjct: 482 LYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSA 541

Query: 123 MSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSR 171
            +++KT LRNR+ DQ++ND +V  ++R+LFD + N+V++ RFQ+M++R
Sbjct: 542 -TVVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSMENR 588

[Close]

BLAST of IVF0020241 vs. TAIR 10
Match: AT2G06541.2 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-36
Identity = 80/168 (47.62%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 3   LQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQLQ 62
           L E N+ F E +TELL CVA L+P++ F  FD+ K++ LA+FYP+DF+  +   LE QL 
Sbjct: 394 LLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEHQLG 453

Query: 63  NYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTFSA 122
            YI ++  D+ F  L S+GDL++ M+ T K   +P VYRLL + L LP+  ATVER FSA
Sbjct: 454 LYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSA 513

Query: 123 MSIIKTQLRNRMEDQWMNDCLVAYIERDLFDKIDNEVIMYRFQNMKSR 171
            +++KT LRNR+ DQ++ND +V  ++R+LFD + N+V++ RFQ+M++R
Sbjct: 514 -TVVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSMENR 560

[Close]

BLAST of IVF0020241 vs. TAIR 10
Match: AT4G09660.1 (CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-26
Identity = 64/123 (52.03%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 1   MQLQESNNRFTEKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTELLILEDQ 60
           MQLQE N+RF E ++ELL+C++ L+P +SF  FD+  L+ L +FYP +FS  E   L+ Q
Sbjct: 540 MQLQEFNDRFDEVNSELLICMSSLSPIDSFCQFDKSMLVRLTEFYPDEFSFVERRSLDHQ 599

Query: 61  LQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDKVYPLVYRLLTLALILPVTMATVERTF 120
           L+ Y+ +V +D  F  L   GDL++ MV T K   +PLVYRLL L+LILPV  ATVER F
Sbjct: 600 LEIYLDNVKNDERFTDLKCFGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVERCF 659

Query: 121 SAM 124
           SAM
Sbjct: 660 SAM 662

The following BLAST results are available for this feature:

BLAST of IVF0020241 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0020241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BM43	3.2e-82	91.38	uncharacterized protein LOC103491145 OS=Cucumis melo OX=3656 GN=LOC103491145 PE=...	[more]
A0A5D3BMQ7	7.8e-81	100.00	Copia-type polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A6P5TRY7	9.9e-60	69.54	uncharacterized protein LOC110770113 OS=Prunus avium OX=42229 GN=LOC110770113 PE...	[more]
A0A6P5TKH2	4.9e-59	69.54	zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110768262 PE=...	[more]
A0A2N9J031	1.0e-56	68.39	TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57563...	[more]

BLAST of IVF0020241 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449194.1	1.48e-105	91.38	PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo]	[more]
TYK00355.1	1.21e-101	100.00	copia-type polyprotein [Cucumis melo var. makuwa]	[more]
XP_021829887.1	8.20e-75	69.54	uncharacterized protein LOC110770113 [Prunus avium]	[more]
XP_021827657.1	2.35e-73	69.54	zinc finger MYM-type protein 1-like [Prunus avium]	[more]
XP_039684545.1	2.17e-70	67.05	zinc finger MYM-type protein 1-like [Medicago truncatula] >XP_039684546.1 zinc f...	[more]

BLAST of IVF0020241 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19260.1	7.8e-41	49.43	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT3G29765.1	2.5e-39	48.85	General transcription factor 2-related zinc finger protein	[more]
AT2G06541.1	2.6e-36	47.62	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT2G06541.2	2.6e-36	47.62	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT4G09660.1	2.4e-26	52.03	CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Ara...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 93..151 e-value: 2.4E-9 score: 36.8
None	No IPR available	PANTHER	PTHR11697:SF107	TRANSCRIPTION FACTOR-LIKE ZINC FINGER PROTEIN, PUTATIVE-RELATED	coord: 1..165
None	No IPR available	PANTHER	PTHR11697	GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN	coord: 1..165
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 93..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020241.2	IVF0020241.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046983	protein dimerization activity