IVF0020223 (gene) Melon (IVF77) v1

Overview


Name	IVF0020223
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	F-box protein At2g35280-like
Location	chr10: 4368678 .. 4369554 (+)
RNA-Seq Expression	IVF0020223
Synteny	IVF0020223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAACCAATTCAAAAGAAAATCAGAAGTTTTGAACTCTCAGATTTCAACGTAAGTTTAACTCTTCGATATTGTGTTTATGGAATTAATTAGTTGTTTAGTTATTATTAATACAATTGTTAATTTTCTTTTCTTCTGATTTATTTTCATGCAGAAGATTGACAAAAAAGATGTGCAAACCCCTTTCTTCACCCCTCATTGTATCACTCCCGAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCAAATTTTGGTCCTTTGTAGAAACTTGCAACAACAACGAAAATCCGGAGAGTCTGTATCGAAAAGGAATGTTGGAATTTTTCACTCACTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAAGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAGTATCGTCGAAAAAAAATTGCAATAACAAAATTAATTGTAGGGTTAATGAGAGAAGAAATGGTTGGGACTGGAAAGATGAAGATGACTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTACAGTAATTAA

mRNA sequence

ATGGCGAACCAATTCAAAAGAAAATCAGAAGTTTTGAACTCTCAGATTTCAACAAGATTGACAAAAAAGATGTGCAAACCCCTTTCTTCACCCCTCATTGTATCACTCCCGAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCAAATTTTGGTCCTTTGTAGAAACTTGCAACAACAACGAAAATCCGGAGAGTCTGTATCGAAAAGGAATGTTGGAATTTTTCACTCACTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAAGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAGTATCGTCGAAAAAAAATTGCAATAACAAAATTAATTGTAGGGTTAATGAGAGAAGAAATGGTTGGGACTGGAAAGATGAAGATGACTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTACAGTAATTAA

Coding sequence (CDS)

ATGGCGAACCAATTCAAAAGAAAATCAGAAGTTTTGAACTCTCAGATTTCAACAAGATTGACAAAAAAGATGTGCAAACCCCTTTCTTCACCCCTCATTGTATCACTCCCGAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAACGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCAAATTTTGGTCCTTTGTAGAAACTTGCAACAACAACGAAAATCCGGAGAGTCTGTATCGAAAAGGAATGTTGGAATTTTTCACTCACTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAAGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAGTATCGTCGAAAAAAAATTGCAATAACAAAATTAATTGTAGGGTTAATGAGAGAAGAAATGGTTGGGACTGGAAAGATGAAGATGACTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTACAGTAATTAA

Protein sequence

MANQFKRKSEVLNSQISTRLTKKMCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVWYFWVKNKISVSSKKNCNNKINCRVNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN

Homology

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BLAST of IVF0020223 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.0e-14
Identity = 64/225 (28.44%), Postives = 105/225 (46.67%), Query Frame = 0


Query: 26  KPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNES 85
           K  +S  + SLP DLL+E+ +   +SS   +   +L +K F    +++Y+F  +SLK   
Sbjct: 17  KTKASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIE 76

Query: 86  FRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDA 145
           F  L W+       F+E C  + NPE+L++KG + +F    +  GL  L  +A+KG  +A
Sbjct: 77  F--LPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEA 136

Query: 146 CYVYGVVL--YAADLVDEGL----AYLKMCEVKLRNKMAECRRRVKEFVWYFWVKNK--- 205
            YVYGV+L         +G     + +K       N++ E R ++++  + FW  +    
Sbjct: 137 KYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVV 196

Query: 206 -----ISVSSKKNCNNKINCRVNERRNGWD-WKDEDDYYGEHTCE 236
                  VS K  C+ K    +     GW  + DE D      CE
Sbjct: 197 EQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

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BLAST of IVF0020223 vs. ExPASy Swiss-Prot
Match: Q1PEW8 (F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.6e-05
Identity = 38/138 (27.54%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 35  SLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNT 94
           +LP DLL E++AK+   S  D     L+ K    ++ND  + + ++L     + L   + 
Sbjct: 13  ALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL---SC 72

Query: 95  PKFWSFVETCNNNENPESLYRKGMLEFFT--HCNEASGLACLKLSAQKGYVDACYVYGVV 154
            K    ++ C  N NP++ Y KG++ +F   HC+    L  + ++A  G  +A Y+Y ++
Sbjct: 73  RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYMYAML 132

Query: 155 LYAADLVDEGLAYLKMCE 171
           L      +EG  Y+   E
Sbjct: 133 LLCRGRTEEGKTYMSQLE 145

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BLAST of IVF0020223 vs. ExPASy TrEMBL
Match: A0A5A7SSE7 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002890 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.5e-116
Identity = 211/234 (90.17%), Postives = 211/234 (90.17%), Query Frame = 0


Query: 24  MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 83
           MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN
Sbjct: 1   MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60

Query: 84  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 143
           ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV
Sbjct: 61  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120

Query: 144 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVWYFWVKNKISVSSKK 203
           DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW              
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180

Query: 204 NCNNKINCRVNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 258
                    VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Sbjct: 181 ---------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211

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BLAST of IVF0020223 vs. ExPASy TrEMBL
Match: A0A0A0LS96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.8e-95
Identity = 182/259 (70.27%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 3   NQFKRKSEVLNSQISTRLTKKMCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLA 62
           NQ KR S  L++QIS    K     LS  +I SLPNDLL EVLAKVA+SSY+DL++AKLA
Sbjct: 4   NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63

Query: 63  TKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFF 122
           TK FL ASNDRYIF+HVSL N  FRNLLWNN+PKFWSF+ETCNN+ENPESLYRKGMLEFF
Sbjct: 64  TKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFF 123

Query: 123 THCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRR 182
           THC EASG+A LK SAQKGYVDACYV+GV+LYA++L DEGL +LK  EVKL NKM ECR+
Sbjct: 124 THCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQ 183

Query: 183 RVKEFVWYFWVKNKISVSS-----KKNCNNKINCRVNERRNGWDWKDEDDYYGEHTCEEC 242
           RVKEFV Y W+KNKIS+S       + C+  INCRVNE+ N WD KDEDDYYG++TCEEC
Sbjct: 184 RVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEEC 243

Query: 243 KWKNEVSRFCNMLRSGGYS 257
           KW NEV RFC MLR+G +S
Sbjct: 244 KWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of IVF0020223 vs. ExPASy TrEMBL
Match: A0A1S3BXN2 (putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.1e-94
Identity = 182/260 (70.00%), Postives = 202/260 (77.69%), Query Frame = 0


Query: 1   MANQFKRKSEVLNSQISTRLTKKMCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
           MAN  K KS   ++ IS    K     LS  +I SLPNDLL EVLAKVA+SSYVDLV+AK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLE 120
           LATK FL AS DRYIF+HVSL N  F N LWNN+P+FWSF+ETCNNNENPESLYRKGMLE
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAEC 180
           FFTHC EASGLA LKLSAQKGYVDACYV  V+LYA+   DEG  +LK  E KLRNKMAEC
Sbjct: 121 FFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAEC 180

Query: 181 RRRVKEFVWYFWVKNKISVSSK----KNCNNKINCRVNERRNGWDWKDEDDYYGEHTCEE 240
           R RVK FV Y W+KN+IS S +    + C+  INCRVNERRN WDWKDEDDYYGE+TCE+
Sbjct: 181 RWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEK 240

Query: 241 CKWKNEVSRFCNMLRSGGYS 257
           CKW NEV RFC MLR+G YS
Sbjct: 241 CKWNNEVFRFCKMLRTGRYS 258

[Close]

BLAST of IVF0020223 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 4.4e-88
Identity = 171/262 (65.27%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 1   MANQFKRKSEVLNSQISTRLTKKMCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
           MA   KRKS+ L SQIS R TK      S P I SLPNDLLIE+LAKVA+SSY DLV+AK
Sbjct: 1   MAGSLKRKSQALGSQIS-RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLE 120
           LATK FL AS+  YIF+H SL+N  F  LLWNN+ +FWSF+E CNNN NPE+LYRKGMLE
Sbjct: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAEC 180
           FFTHC EASG+  LK+SAQKGY +ACYVYG++LYA  + DEG+ +LK+CE KL  K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180

Query: 181 RRRVKEFVWYFWVKNKISVSSK-----KNCNNKIN--CRVNERRNGWDWKDEDDYYGEHT 240
           RRRVKEFV + WVKNKISV  K     + C N I   C+ N RR GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240

Query: 241 CEECKWKNEVSRFCNMLRSGGY 256
           CE CKW  EV RFCNMLR+G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259

[Close]

BLAST of IVF0020223 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.8e-87
Identity = 170/262 (64.89%), Postives = 197/262 (75.19%), Query Frame = 0


Query: 1   MANQFKRKSEVLNSQISTRLTKKMCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
           MA   KRKS+ L S IS R TK      S P I SLPNDLLIE+LAKVA+SSY DLV+AK
Sbjct: 1   MAGSLKRKSQSLGSHIS-RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLE 120
           LATK FL AS+  YIF+H SL+N  F  LLWNN+ +FWSF+E CNNN NPE+LYRKGMLE
Sbjct: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAEC 180
           FFTHC EASG+  LK+SAQKGY +ACYVYG++LYA  + DEG+ +LK+CE KL  K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180

Query: 181 RRRVKEFVWYFWVKNKISVSSK-----KNCNNKIN--CRVNERRNGWDWKDEDDYYGEHT 240
           RRRVKEFV + WVKNKISV  K     + C N I   C+ N RR GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240

Query: 241 CEECKWKNEVSRFCNMLRSGGY 256
           CE CKW  EV RFCNMLR+G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259

[Close]

BLAST of IVF0020223 vs. NCBI nr
Match: KAA0034134.1 (putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 427 bits (1099), Expect = 2.87e-150
Identity = 211/234 (90.17%), Postives = 211/234 (90.17%), Query Frame = 0


Query: 24  MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 83
           MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN
Sbjct: 1   MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60

Query: 84  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 143
           ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV
Sbjct: 61  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120

Query: 144 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVWYFWVKNKISVSSKK 203
           DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW              
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180

Query: 204 NCNNKINCRVNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 257
                    VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Sbjct: 181 ---------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211

[Close]

BLAST of IVF0020223 vs. NCBI nr
Match: KAE8648647.1 (hypothetical protein Csa_009058 [Cucumis sativus])

HSP 1 Score: 414 bits (1065), Expect = 2.12e-144
Identity = 207/258 (80.23%), Postives = 231/258 (89.53%), Query Frame = 0


Query: 1   MANQFKRKSEV-LNSQISTRLTKKMCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRA 60
           MANQ KRKSE   NSQISTR TKKMC+P SS LIVSLPNDLLIEVLAKVA+SSY+DLV+A
Sbjct: 1   MANQLKRKSEPSFNSQISTR-TKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQA 60

Query: 61  KLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGML 120
           KLATKLFLHASND YIF+HVSL+N+SFRNLLWNNTP+  SF+ET NNNENPESLYRKG +
Sbjct: 61  KLATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTM 120

Query: 121 EFFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAE 180
           EFF+H  EASGL+ LK SAQKGYVDACYVYGVV+YAA+L +EG+ YLKMCE KL NKMAE
Sbjct: 121 EFFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAE 180

Query: 181 CRRRVKEFVWYFWVKNKISVSSKKNCNNKINCRVNERRNGWDWKDEDDYYGEHTCEECKW 240
           CRRRVKEFVWYFW+KN+IS+S K+ C+N +NC+VNER NGWDWKDEDDYYGEHTCE+CKW
Sbjct: 181 CRRRVKEFVWYFWIKNRISMS-KEICSN-VNCKVNERSNGWDWKDEDDYYGEHTCEQCKW 240

Query: 241 KNEVSRFCNMLRSGGYSN 257
            NEV RFCNMLR GGYSN
Sbjct: 241 SNEVLRFCNMLRRGGYSN 255

[Close]

BLAST of IVF0020223 vs. NCBI nr
Match: XP_004137554.1 (putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical protein Csa_013173 [Cucumis sativus])

HSP 1 Score: 357 bits (917), Expect = 8.58e-122
Identity = 182/259 (70.27%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 3   NQFKRKSEVLNSQISTRLTKKMCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLA 62
           NQ KR S  L++QIS    K     LS  +I SLPNDLL EVLAKVA+SSY+DL++AKLA
Sbjct: 4   NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63

Query: 63  TKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFF 122
           TK FL ASNDRYIF+HVSL N  FRNLLWNN+PKFWSF+ETCNN+ENPESLYRKGMLEFF
Sbjct: 64  TKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFF 123

Query: 123 THCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRR 182
           THC EASG+A LK SAQKGYVDACYV+GV+LYA++L DEGL +LK  EVKL NKM ECR+
Sbjct: 124 THCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQ 183

Query: 183 RVKEFVWYFWVKNKISVSSK-----KNCNNKINCRVNERRNGWDWKDEDDYYGEHTCEEC 242
           RVKEFV Y W+KNKIS+S       + C+  INCRVNE+ N WD KDEDDYYG++TCEEC
Sbjct: 184 RVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEEC 243

Query: 243 KWKNEVSRFCNMLRSGGYS 256
           KW NEV RFC MLR+G +S
Sbjct: 244 KWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of IVF0020223 vs. NCBI nr
Match: XP_008453691.1 (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])

HSP 1 Score: 355 bits (910), Expect = 9.29e-121
Identity = 182/260 (70.00%), Postives = 202/260 (77.69%), Query Frame = 0


Query: 1   MANQFKRKSEVLNSQISTRLTKKMCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
           MAN  K KS   ++ IS    K     LS  +I SLPNDLL EVLAKVA+SSYVDLV+AK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLE 120
           LATK FL AS DRYIF+HVSL N  F N LWNN+P+FWSF+ETCNNNENPESLYRKGMLE
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAEC 180
           FFTHC EASGLA LKLSAQKGYVDACYV  V+LYA+   DEG  +LK  E KLRNKMAEC
Sbjct: 121 FFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAEC 180

Query: 181 RRRVKEFVWYFWVKNKISVSSK----KNCNNKINCRVNERRNGWDWKDEDDYYGEHTCEE 240
           R RVK FV Y W+KN+IS S +    + C+  INCRVNERRN WDWKDEDDYYGE+TCE+
Sbjct: 181 RWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEK 240

Query: 241 CKWKNEVSRFCNMLRSGGYS 256
           CKW NEV RFC MLR+G YS
Sbjct: 241 CKWNNEVFRFCKMLRTGRYS 258

[Close]

BLAST of IVF0020223 vs. NCBI nr
Match: XP_038891683.1 (putative F-box protein At1g67623 [Benincasa hispida])

HSP 1 Score: 350 bits (899), Expect = 2.18e-119
Identity = 171/234 (73.08%), Postives = 194/234 (82.91%), Query Frame = 0


Query: 29  SSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRN 88
           S  +I SLPNDLLIEVLAKVA+SSY DLV+AKLATK FL  SN+ YIFRHVSL N  F  
Sbjct: 6   SPSVIKSLPNDLLIEVLAKVAASSYTDLVQAKLATKDFLEVSNEGYIFRHVSLGN--FSK 65

Query: 89  LLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDACYV 148
           LLWNN+P+FWS +ETCNNNENPESLYRKGMLEFFTHC EASGL  LK SA+K Y+DACYV
Sbjct: 66  LLWNNSPEFWSLIETCNNNENPESLYRKGMLEFFTHCREASGLGYLKRSAEKDYMDACYV 125

Query: 149 YGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVWYFWVKNKISVSSK-----K 208
           YGVVLYA +L +EGL +L+ CE KL NKM+ECRRRVKEFVW  W+KNK+S+S K     +
Sbjct: 126 YGVVLYATNLKEEGLQFLRNCEAKLGNKMSECRRRVKEFVWCLWIKNKVSLSEKEFGGRR 185

Query: 209 NCNNKI--NCRVNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGY 255
            C+N I  NC +NE+RNGWDWKDEDD+YGEHTCEECKWK EVSRFCNMLR+G Y
Sbjct: 186 YCSNVIKNNCLINEKRNGWDWKDEDDHYGEHTCEECKWKGEVSRFCNMLRTGAY 237

[Close]

BLAST of IVF0020223 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-15
Identity = 64/225 (28.44%), Postives = 105/225 (46.67%), Query Frame = 0


Query: 26  KPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNES 85
           K  +S  + SLP DLL+E+ +   +SS   +   +L +K F    +++Y+F  +SLK   
Sbjct: 17  KTKASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIE 76

Query: 86  FRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDA 145
           F  L W+       F+E C  + NPE+L++KG + +F    +  GL  L  +A+KG  +A
Sbjct: 77  F--LPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEA 136

Query: 146 CYVYGVVL--YAADLVDEGL----AYLKMCEVKLRNKMAECRRRVKEFVWYFWVKNK--- 205
            YVYGV+L         +G     + +K       N++ E R ++++  + FW  +    
Sbjct: 137 KYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVV 196

Query: 206 -----ISVSSKKNCNNKINCRVNERRNGWD-WKDEDDYYGEHTCE 236
                  VS K  C+ K    +     GW  + DE D      CE
Sbjct: 197 EQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

[Close]

BLAST of IVF0020223 vs. TAIR 10
Match: AT1G74875.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-11
Identity = 63/227 (27.75%), Postives = 96/227 (42.29%), Query Frame = 0


Query: 38  NDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPKF 97
           N   I ++  V SSS  +    +L +K F   SNDRYI + +SL       L W N  KF
Sbjct: 17  NMFQIHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPL--LPWRNRKKF 76

Query: 98  WSFVETCNNNENPESLYRKGMLEFF---THCNEAS-GLACLKLSAQKGYVDACYVYGVVL 157
            +F + C  + N E++YRKG++++F   +H  +   GL  +  +A  G  +A YVYG++L
Sbjct: 77  HNFFKRCRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLIL 136

Query: 158 --YAADLVDEGLAYLKMCEVKLR-----NKMAECRRRVKEFVWY----FWVKNKISVSSK 217
                     G   L      L       +M + R  ++   W+         K  V   
Sbjct: 137 ICLGGKTKQNGFKILSSLRKPLMLSNTIKEMEKHRTHIRNMWWWGEPMMRHLQKSYVREN 196

Query: 218 KNCNNKINCRVN---ERRNGWDWKDEDDYYGEHTCEECKWKNEVSRF 247
            NC+ +     N     R G    ++DD      CE C   +EV  F
Sbjct: 197 CNCDGRTEIFPNYCFRHRFG----EDDDMLTSSACEICLCHHEVKLF 237

[Close]

BLAST of IVF0020223 vs. TAIR 10
Match: AT2G35280.1 (F-box family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.9e-06
Identity = 38/138 (27.54%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 35  SLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNT 94
           +LP DLL E++AK+   S  D     L+ K    ++ND  + + ++L     + L   + 
Sbjct: 13  ALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL---SC 72

Query: 95  PKFWSFVETCNNNENPESLYRKGMLEFFT--HCNEASGLACLKLSAQKGYVDACYVYGVV 154
            K    ++ C  N NP++ Y KG++ +F   HC+    L  + ++A  G  +A Y+Y ++
Sbjct: 73  RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYMYAML 132

Query: 155 LYAADLVDEGLAYLKMCE 171
           L      +EG  Y+   E
Sbjct: 133 LLCRGRTEEGKTYMSQLE 145

The following BLAST results are available for this feature:

BLAST of IVF0020223 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXC7	4.0e-14	28.44	Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE...	[more]
Q1PEW8	2.6e-05	27.54	F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1	[more]

BLAST of IVF0020223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSE7	6.5e-116	90.17	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A0A0LS96	4.8e-95	70.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1	[more]
A0A1S3BXN2	3.1e-94	70.00	putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV...	[more]
A0A6J1JRX4	4.4e-88	65.27	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=...	[more]
A0A6J1JRV1	2.8e-87	64.89	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=...	[more]

BLAST of IVF0020223 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034134.1	2.87e-150	90.17	putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box pro...	[more]
KAE8648647.1	2.12e-144	80.23	hypothetical protein Csa_009058 [Cucumis sativus]	[more]
XP_004137554.1	8.58e-122	70.27	putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical prot...	[more]
XP_008453691.1	9.29e-121	70.00	PREDICTED: putative F-box protein At1g67623 [Cucumis melo]	[more]
XP_038891683.1	2.18e-119	73.08	putative F-box protein At1g67623 [Benincasa hispida]	[more]

BLAST of IVF0020223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67623.1	2.9e-15	28.44	F-box family protein	[more]
AT1G74875.1	3.3e-11	27.75	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G35280.1	1.9e-06	27.54	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33784:SF31	F-BOX PROTEIN	coord: 32..251
IPR040338	Putative F-box protein At1g67623-like	PANTHER	PTHR33784	OS05G0482100 PROTEIN	coord: 32..251
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 23..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020223.1	IVF0020223.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding