IVF0020204 (gene) Melon (IVF77) v1

Overview


Name	IVF0020204
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag-pro-like protein
Location	chr05: 6984377 .. 6985120 (-)
RNA-Seq Expression	IVF0020204
Synteny	IVF0020204

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCAAAGTAATGATCAGGTTCAAGCAGTTCGTCAAGATGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTCCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTACTAGAGGACATGACTACATACCCTCCAGGTTTTACTCCTCAACAGTCATCTAGTCCTCGCATAGTGGATAGGACTTATCCTACACAAAATCCTAACACAACCACCCAACAAGCAGTCCATGTGAGTGATCCCATATCTACTCTAATTACGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAGAAGAATGGAATTTCTAGAAGAAAGACTGCGCGCCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCTAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACTTGTCCAAAAAGTCACCTAGTTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTTGTTGCTTCCAAGACAGCTTAGTTGGCCCCGCTTCTCGATGGTACATGCAGTTTGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCCGATTCATTCTTAAAAAAATATAAGTACAACATTTTTAAAAAGAACTTTGTAGTTGTTACAATTGTTCTAAAGTGCTACAAATGA

mRNA sequence

ATGGATGAGCAAAGTAATGATCAGGTTCAAGCAGTTCGTCAAGATGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTCCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTACTAGAGGACATGACTACATACCCTCCAGGTTTTACTCCTCAACAGTCATCTAGTCCTCGCATAGTGGATAGGACTTATCCTACACAAAATCCTAACACAACCACCCAACAAGCAGTCCATGTGAGTGATCCCATATCTACTCTAATTACGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAGAAGAATGGAATTTCTAGAAGAAAGACTGCGCGCCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCTAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACTTGTCCAAAAAGTCACCTAGTTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTTGTTGCTTCCAAGACAGCTTAGTTGGCCCCGCTTCTCGATGGTACATGCAGTTTGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCCGATTCATTCTTAAAAAAATATAAGTACAACATTTTTAAAAAGAACTTTGTAGTTGTTACAATTGTTCTAAAGTGCTACAAATGA

Coding sequence (CDS)

ATGGATGAGCAAAGTAATGATCAGGTTCAAGCAGTTCGTCAAGATGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTCCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTACTAGAGGACATGACTACATACCCTCCAGGTTTTACTCCTCAACAGTCATCTAGTCCTCGCATAGTGGATAGGACTTATCCTACACAAAATCCTAACACAACCACCCAACAAGCAGTCCATGTGAGTGATCCCATATCTACTCTAATTACGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAGAAGAATGGAATTTCTAGAAGAAAGACTGCGCGCCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCTAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACTTGTCCAAAAAGTCACCTAGTTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTTGTTGCTTCCAAGACAGCTTAGTTGGCCCCGCTTCTCGATGGTACATGCAGTTTGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCCGATTCATTCTTAAAAAAATATAAGTACAACATTTTTAAAAAGAACTTTGTAGTTGTTACAATTGTTCTAAAGTGCTACAAATGA

Protein sequence

MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNIFKKNFVVVTIVLKCYK

Homology

[Close]

BLAST of IVF0020204 vs. ExPASy TrEMBL
Match: A0A5A7SR42 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001180 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.3e-117
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP
Sbjct: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
           PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF
Sbjct: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS
Sbjct: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVH 215
           AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVH
Sbjct: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVH 214

[Close]

BLAST of IVF0020204 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 212/235 (90.21%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV G SSQVEVDLNQVLEDM TYP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRR 120
           PGFTPQ+SSSPR+ DRTYPT     NPNTTTQQA H ++PISTLI EGGKKISEEQGSRR
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
           R+EFLEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI 232
           RKMSAYAHDDKLLI CFQDSLVGPASRWYMQ DGSQVHRWKDLADSFLK+YKYNI
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNI 235

[Close]

BLAST of IVF0020204 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.2e-114
Identity = 210/235 (89.36%), Postives = 219/235 (93.19%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRR 120
           PGFTPQ+SSSPR+ DRTYPT     NPNTTTQQ  H ++PISTLI EGGKKISEEQGSRR
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 RMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
           R+EFLEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI 232
           RKMSAYAHDDKLLI CFQD+LVGPASRWYMQ DGSQVHRWKDLADSFLK+YKYNI
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNI 235

[Close]

BLAST of IVF0020204 vs. ExPASy TrEMBL
Match: A0A5A7TXF2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001530 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.5e-109
Identity = 203/229 (88.65%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRR 120
           PGFTPQ+SSSPR+ D TYPT     NPNTTTQQA H ++PIST I EG KKISEEQGSRR
Sbjct: 61  PGFTPQRSSSPRMGDITYPTSFPAPNPNTTTQQAAHANNPISTPIMEGSKKISEEQGSRR 120

Query: 121 RMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
           R+EFLEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLK 226
           RKMSAYAHDDKLLI CFQDSLVGPASRWYMQ DGSQVHRWKDLADSF K
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFFK 229

[Close]

BLAST of IVF0020204 vs. ExPASy TrEMBL
Match: A0A5D3C562 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00220 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.4e-109
Identity = 204/231 (88.31%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
           PGFTPQ+SSSPR+   TYPTQNPN  TQQA HVSDP+ST ITE GKKISEEQGSR+R+EF
Sbjct: 61  PGFTPQRSSSPRM---TYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           LEERLRAI+GADMYGSIDA QLCLISDVVIP KFKTPDFEKYNGTTCPKSHLVMYCRKMS
Sbjct: 121 LEERLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI 232
           AYAHDDKLLI C QD+LVG  SR YMQ DGSQVHRWKDLADSFLK+YKYNI
Sbjct: 181 AYAHDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNI 228

[Close]

BLAST of IVF0020204 vs. NCBI nr
Match: KAA0032021.1 (Gag-pro-like protein [Cucumis melo var. makuwa] >TYK16842.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 429 bits (1102), Expect = 2.21e-150
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP
Sbjct: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
           PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF
Sbjct: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS
Sbjct: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVH 214
           AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVH
Sbjct: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVH 214

[Close]

BLAST of IVF0020204 vs. NCBI nr
Match: KAA0046607.1 (Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 402 bits (1032), Expect = 6.41e-140
Identity = 203/229 (88.65%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRR 120
           PGFTPQ+SSSPR+ D TYPT     NPNTTTQQA H ++PIST I EG KKISEEQGSRR
Sbjct: 61  PGFTPQRSSSPRMGDITYPTSFPAPNPNTTTQQAAHANNPISTPIMEGSKKISEEQGSRR 120

Query: 121 RMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
           R+EFLEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGT+CPKSHLVMYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLK 225
           RKMSAYAHDDKLLI CFQDSLVGPASRWYMQ DGSQVHRWKDLADSF K
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFFK 229

[Close]

BLAST of IVF0020204 vs. NCBI nr
Match: TYK06464.1 (Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 400 bits (1028), Expect = 4.30e-139
Identity = 204/231 (88.31%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
           PGFTPQ+SSSPR+   TYPTQNPN  TQQA HVSDP+ST ITE GKKISEEQGSR+R+EF
Sbjct: 61  PGFTPQRSSSPRM---TYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           LEERLRAI+GADMYGSIDA QLCLISDVVIP KFKTPDFEKYNGTTCPKSHLVMYCRKMS
Sbjct: 121 LEERLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI 231
           AYAHDDKLLI C QD+LVG  SR YMQ DGSQVHRWKDLADSFLK+YKYNI
Sbjct: 181 AYAHDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNI 228

[Close]

BLAST of IVF0020204 vs. NCBI nr
Match: XP_016902756.1 (PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo] >KAA0025341.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 397 bits (1020), Expect = 7.11e-138
Identity = 203/231 (87.88%), Postives = 212/231 (91.77%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
            GFTPQ+SSSPR+   TYPTQNPN  TQQA HVSDP+ST ITE GKKISEEQGSR+R+EF
Sbjct: 61  QGFTPQRSSSPRM---TYPTQNPNPITQQANHVSDPMSTPITESGKKISEEQGSRKRLEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           LEERLRAI+GADMYGSIDA QLCLISDVVIP KFKTPDFEKYNGTTCPKSHLVMYCRKMS
Sbjct: 121 LEERLRAIKGADMYGSIDAAQLCLISDVVIPAKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI 231
           AYAHDDKLLI C QD+LVG  SR YMQ DGSQVHRWKDLADSFLK+YKYNI
Sbjct: 181 AYAHDDKLLIDCIQDNLVGSTSRRYMQLDGSQVHRWKDLADSFLKQYKYNI 228

[Close]

BLAST of IVF0020204 vs. NCBI nr
Match: XP_008447676.1 (PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo] >KAA0050803.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 399 bits (1024), Expect = 2.39e-137
Identity = 202/231 (87.45%), Postives = 212/231 (91.77%), Query Frame = 0


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
           PGFTPQ+SSSPR+   TY TQNPN  TQQ  HVSDP+ST ITE GKKI EEQGSR+R+EF
Sbjct: 61  PGFTPQRSSSPRM---TYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           +EERLRAIEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYCRKMS
Sbjct: 121 VEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLKKYKYNI 231
           AYA+DDKLLI CFQDSLVGP SRWYMQ DGSQVHRWKDLADSFLK+YKYNI
Sbjct: 181 AYAYDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNI 228

The following BLAST results are available for this feature:

BLAST of IVF0020204 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0020204 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SR42	3.3e-117	100.00	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G...	[more]
A0A5A7VAU5	1.4e-115	90.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V681	1.2e-114	89.36	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TXF2	2.5e-109	88.65	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114...	[more]
A0A5D3C562	7.4e-109	88.31	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718...	[more]

BLAST of IVF0020204 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032021.1	2.21e-150	100.00	Gag-pro-like protein [Cucumis melo var. makuwa] >TYK16842.1 Gag-pro-like protein...	[more]
KAA0046607.1	6.41e-140	88.65	Gag-pro-like protein [Cucumis melo var. makuwa]	[more]
TYK06464.1	4.30e-139	88.31	Gag-pro-like protein [Cucumis melo var. makuwa]	[more]
XP_016902756.1	7.11e-138	87.88	PREDICTED: uncharacterized protein LOC107991868 [Cucumis melo] >KAA0025341.1 Gag...	[more]
XP_008447676.1	2.39e-137	87.45	PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo] >KAA0050803.1 Gag...	[more]

BLAST of IVF0020204 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020204.2	IVF0020204.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003964	RNA-directed DNA polymerase activity