IVF0020202 (gene) Melon (IVF77) v1

Overview


Name	IVF0020202
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	lipid transfer-like protein VAS
Location	chr06: 11427782 .. 11428693 (-)
RNA-Seq Expression	IVF0020202
Synteny	IVF0020202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACAAAGCAGATCATCAAATTTGAATGGAAATTAGAAGAGCAACAATGAAGAAAATAGTAGCAGCAGCAGCAGTAGTAATGGTATTATTAGGTTGCGGCGGAAGCATTGGAACAATGGCTCAAAATGAAAAGACATCATGTGTGAATACACTAGTTCCATGCTTAAATTACGTAAACGGAACCAGAGATCCCCCGGAGAGTTGCTGTAGTCCACTGAGATCCATCATCAATTCAAATCCGGAATGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATCGAGCGGAGGCGGCAGGGATAGATATCAATGAGGCCCAACTCTTACCTGCTCGTTGTGGAGAACATGTTAATCCTCTCTCTTGCCTTGCTGCCAATAATACTTCTGGTAAATAATTGATTGCAACAAATAACTTATTTTAAGAGTATAATTTAGAGTGAGAATTGTTAATGGGCCAAAATTGCAACCTTCTCCATATTGATTAAATTGATACAATATTTGATAAGCTTAGGGTAGACACATAAAATTTTTCTGATCTTCTTTATTATTTTTGGCTTCAAATTAATCCGTTGGATTTGTCCGGATTCTATTTTGATTAAATTCTTGATTTGAATTTGCAGGCTTGGTTTCCATATCTTTGACTCTTCAAGTAATTACACTTGCGATTTCCACAAAGCTTATCATGTCTTCAATTCTTCACTTTTAGGTTCTCTGTTTGTACCTATTTATCCATTATGTGTCTCTCTTACCATTTTTCATTATTAGTATATTATCTCCTTTTGTTTTAAAGGCTGAAAAAGTAAATTTTATCTTTTGGTATCATTCTAGGTTCAAGATTCTAATAATATGTCTATTAGTATTTAATATTTGTGTAAATACATATGCCTTCCATCCCATGAAAATCCTCATAGTG

mRNA sequence

GAACAAAGCAGATCATCAAATTTGAATGGAAATTAGAAGAGCAACAATGAAGAAAATAGTAGCAGCAGCAGCAGTAGTAATGGTATTATTAGGTTGCGGCGGAAGCATTGGAACAATGGCTCAAAATGAAAAGACATCATGTGTGAATACACTAGTTCCATGCTTAAATTACGTAAACGGAACCAGAGATCCCCCGGAGAGTTGCTGTAGTCCACTGAGATCCATCATCAATTCAAATCCGGAATGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATCGAGCGGAGGCGGCAGGGATAGATATCAATGAGGCCCAACTCTTACCTGCTCGTTGTGGAGAACATGTTAATCCTCTCTCTTGCCTTGCTGCCAATAATACTTCTGGCTTGGTTTCCATATCTTTGACTCTTCAAGTAATTACACTTGCGATTTCCACAAAGCTTATCATGTCTTCAATTCTTCACTTTTAGGTTCTCTGTTTGTACCTATTTATCCATTATGTGTCTCTCTTACCATTTTTCATTATTAGTATATTATCTCCTTTTGTTTTAAAGGCTGAAAAAGTAAATTTTATCTTTTGGTATCATTCTAGGTTCAAGATTCTAATAATATGTCTATTAGTATTTAATATTTGTGTAAATACATATGCCTTCCATCCCATGAAAATCCTCATAGTG

Coding sequence (CDS)

ATGGAAATTAGAAGAGCAACAATGAAGAAAATAGTAGCAGCAGCAGCAGTAGTAATGGTATTATTAGGTTGCGGCGGAAGCATTGGAACAATGGCTCAAAATGAAAAGACATCATGTGTGAATACACTAGTTCCATGCTTAAATTACGTAAACGGAACCAGAGATCCCCCGGAGAGTTGCTGTAGTCCACTGAGATCCATCATCAATTCAAATCCGGAATGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATCGAGCGGAGGCGGCAGGGATAGATATCAATGAGGCCCAACTCTTACCTGCTCGTTGTGGAGAACATGTTAATCCTCTCTCTTGCCTTGCTGCCAATAATACTTCTGGCTTGGTTTCCATATCTTTGACTCTTCAAGTAATTACACTTGCGATTTCCACAAAGCTTATCATGTCTTCAATTCTTCACTTTTAG

Protein sequence

MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISLTLQVITLAISTKLIMSSILHF

Homology

[Close]

BLAST of IVF0020202 vs. ExPASy Swiss-Prot
Match: Q9FFY3 (Non-specific lipid transfer protein GPI-anchored 30 OS=Arabidopsis thaliana OX=3702 GN=LTPG30 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.8e-28
Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 19  MVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSIINSNPECLCGL 78
           +VLL    S G     +  SC+N L PCLNY+NGT++ P+ CC+PL+S+I +NPECLC +
Sbjct: 12  VVLLLVAASSGMRINGQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSVIRNNPECLCRM 71

Query: 79  ISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCL-----AANNTSGLVSISLTLQ--- 138
           IS   S++AE AGID+N+AQ+LPARCGEHVNP++CL      + N+    SI  T     
Sbjct: 72  ISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDRSSSIGNTFSQSY 131

Query: 139 -VITLAISTKLI 142
            + TLAI+  ++
Sbjct: 132 WMTTLAIAATVL 143

[Close]

BLAST of IVF0020202 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 10  KIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNG-TRDPPESCCSPLRSII 69
           K+      + V +    S    AQ+  T+ + ++ PCLNY+ G +  P + CC+ L  ++
Sbjct: 2   KMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVV 61

Query: 70  NSNPECLCGLISREGSNRAEAAGIDINEAQL--LPARCGEHVNPLS-CLAANNTSGLVSI 127
            S+P+CLC +++  GS      GI++N+ Q   LP  C     P+S C       G  S 
Sbjct: 62  QSSPDCLCQVLNGGGSQ----LGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSD 118

[Close]

BLAST of IVF0020202 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-07
Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 37  TSCVNTLV---PCLNYVNG-TRDPPESCCSPLRSIINSNPECLCGLISREGSNRAEAAGI 96
           +SCV+TL    PCL+Y+ G +  P + CCS L S+I S+P+C+C  ++    N     G+
Sbjct: 28  SSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPN----IGL 87

Query: 97  DINEAQL--LPARCGEHVNPLS-CLAA 117
           +IN  Q   LP  C     PL+ C AA
Sbjct: 88  NINRTQALQLPNACNIQTPPLTQCNAA 110

[Close]

BLAST of IVF0020202 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.0e-06
Identity = 35/107 (32.71%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 8   MKKIVAAAAVVMVLLGCGGSIGTMAQN---EKTSCVNTLVPCLNYVNGTR-DPPESCCSP 67
           + K +A    V+VL     S+   AQ    + T+C+  L+PC  Y++     PP SCC P
Sbjct: 3   INKFLAVVVAVVVLY----SVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGP 62

Query: 68  LRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNP 111
           ++ I+  +  CLC  I+       +A  +    A LLP  CG  VNP
Sbjct: 63  MKEIVEKDAPCLC--IAFNNPEVLKALNLTKENALLLPKACG--VNP 101

[Close]

BLAST of IVF0020202 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-05
Identity = 40/121 (33.06%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 11  IVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVN-GTRDPPESCCSPLRSIIN 70
           I+A  A+V+     GG+  T  Q      + +L PCL Y+N G+  P  SCC    +++ 
Sbjct: 2   ILAILALVIATFLYGGA--TTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQ 61

Query: 71  SNPECLCGLISREGSNRAEAAGIDINE--AQLLPARCG-EHVNPLSCLAANNTSGLVSIS 128
           S+PECLC +++   SN +   G   N   A  LP  C  +  +P  C    NT G V  +
Sbjct: 62  SSPECLCSVVN---SNESSFYGFKFNRTLALNLPTACNVQTPSPSLC----NTGGNVPTT 113

[Close]

BLAST of IVF0020202 vs. ExPASy TrEMBL
Match: A0A1S3BMN1 (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103491702 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 7.9e-74
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60
           MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC
Sbjct: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60

Query: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120
           CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS
Sbjct: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120

Query: 121 GLVSISLTLQVITLAISTKLIMSSILHF 149
           GLVSISLTLQVITLAISTKLIMSSILHF
Sbjct: 121 GLVSISLTLQVITLAISTKLIMSSILHF 148

[Close]

BLAST of IVF0020202 vs. ExPASy TrEMBL
Match: A0A5A7U4K4 (Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001950 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 8   MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI 67
           MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI
Sbjct: 1   MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI 60

Query: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL 127
           INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL
Sbjct: 61  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL 120

Query: 128 TLQVITLAISTKLIMSSILHF 149
           TLQVITLAISTKLIMSSILHF
Sbjct: 121 TLQVITLAISTKLIMSSILHF 141

[Close]

BLAST of IVF0020202 vs. ExPASy TrEMBL
Match: A0A0A0L9L7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G250900 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.3e-67
Identity = 137/148 (92.57%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60
           MEIRR  MKKIV AAAVVMVLLGCGGSIGTMAQ+E TSCVNTL+PCLNYVNGTRDPPESC
Sbjct: 1   MEIRREIMKKIV-AAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESC 60

Query: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120
           C+PLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS
Sbjct: 61  CNPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120

Query: 121 GLVSISLTLQVITLAISTKLIMSSILHF 149
           G  S+SL LQVITLAISTKLIMSSILHF
Sbjct: 121 GSPSMSLALQVITLAISTKLIMSSILHF 147

[Close]

BLAST of IVF0020202 vs. ExPASy TrEMBL
Match: A0A6J1J1M2 (lipid transfer-like protein VAS OS=Cucurbita maxima OX=3661 GN=LOC111481899 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.8e-38
Identity = 79/129 (61.24%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 20  VLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSIINSNPECLCGLI 79
           +LL    ++   A+ + TSC+N L+PCLNY+NGTRDPP SCC+PL+S+I+SNP+CLC LI
Sbjct: 13  MLLVLASAMAFQARAQDTSCMNRLIPCLNYLNGTRDPPPSCCNPLKSVIDSNPDCLCALI 72

Query: 80  SREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISLTLQVITLAISTK 139
           SR+GS+RAE AGID+++AQLLP RCGEHVNPLSCLAA N +  +SIS  LQ+I+L  +  
Sbjct: 73  SRDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISSALQLISLTSTAS 132

Query: 140 LIMSSILHF 149
           L+MS +LHF
Sbjct: 133 LLMSGVLHF 141

[Close]

BLAST of IVF0020202 vs. ExPASy TrEMBL
Match: A0A6J1F9V7 (lipid transfer-like protein VAS OS=Cucurbita moschata OX=3662 GN=LOC111442128 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 9.1e-38
Identity = 78/129 (60.47%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 20  VLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSIINSNPECLCGLI 79
           +LL    ++    + + TSC+N L+PCLNY+NGTRDPP SCC+PL+S+I+SNP+CLC LI
Sbjct: 13  MLLVLASAMAFQGRAQDTSCMNRLIPCLNYLNGTRDPPSSCCNPLKSVIDSNPDCLCALI 72

Query: 80  SREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISLTLQVITLAISTK 139
           SR+GS+RAE AGID+++AQLLP RCGEHVNPLSCLAA N +  +SIS TLQ+I+L  +  
Sbjct: 73  SRDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISSTLQLISLTSTAS 132

Query: 140 LIMSSILHF 149
           L+MS +L F
Sbjct: 133 LLMSGVLRF 141

[Close]

BLAST of IVF0020202 vs. NCBI nr
Match: XP_008449981.1 (PREDICTED: lipid transfer-like protein VAS [Cucumis melo])

HSP 1 Score: 285 bits (728), Expect = 1.40e-96
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60
           MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC
Sbjct: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60

Query: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120
           CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS
Sbjct: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120

Query: 121 GLVSISLTLQVITLAISTKLIMSSILHF 148
           GLVSISLTLQVITLAISTKLIMSSILHF
Sbjct: 121 GLVSISLTLQVITLAISTKLIMSSILHF 148

[Close]

BLAST of IVF0020202 vs. NCBI nr
Match: KAA0048555.1 (lipid transfer-like protein VAS [Cucumis melo var. makuwa] >TYK28357.1 lipid transfer-like protein VAS [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (697), Expect = 5.89e-92
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 8   MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI 67
           MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI
Sbjct: 1   MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI 60

Query: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL 127
           INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL
Sbjct: 61  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL 120

Query: 128 TLQVITLAISTKLIMSSILHF 148
           TLQVITLAISTKLIMSSILHF
Sbjct: 121 TLQVITLAISTKLIMSSILHF 141

[Close]

BLAST of IVF0020202 vs. NCBI nr
Match: XP_004145619.1 (lipid transfer-like protein VAS [Cucumis sativus] >KGN57679.1 hypothetical protein Csa_011401 [Cucumis sativus])

HSP 1 Score: 261 bits (667), Expect = 2.71e-87
Identity = 137/148 (92.57%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60
           MEIRR  MKKIVAA AVVMVLLGCGGSIGTMAQ+E TSCVNTL+PCLNYVNGTRDPPESC
Sbjct: 1   MEIRREIMKKIVAA-AVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESC 60

Query: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120
           C+PLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS
Sbjct: 61  CNPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120

Query: 121 GLVSISLTLQVITLAISTKLIMSSILHF 148
           G  S+SL LQVITLAISTKLIMSSILHF
Sbjct: 121 GSPSMSLALQVITLAISTKLIMSSILHF 147

[Close]

BLAST of IVF0020202 vs. NCBI nr
Match: XP_038901700.1 (non-specific lipid transfer protein GPI-anchored 30 [Benincasa hispida])

HSP 1 Score: 202 bits (515), Expect = 2.12e-63
Identity = 110/148 (74.32%), Postives = 120/148 (81.08%), Query Frame = 0


Query: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60
           MEIR A  K IV  A V    +G       MAQN+ TSCVN L+PCLNY+NGT DPPESC
Sbjct: 60  MEIRSAMAKMIVLLAVVGCATMG-------MAQNQDTSCVNRLIPCLNYLNGTGDPPESC 119

Query: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120
           C+PLRSII+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCGEHVNPLSCL ANN +
Sbjct: 120 CNPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSCLTANN-A 179

Query: 121 GLVSISLTLQVITLAISTKLIMSSILHF 148
           GL S+S TLQVITLA ST LIM SILHF
Sbjct: 180 GLPSMSSTLQVITLATSTMLIMPSILHF 199

[Close]

BLAST of IVF0020202 vs. NCBI nr
Match: XP_023528269.1 (lipid transfer-like protein VAS [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169 bits (428), Expect = 5.63e-51
Identity = 79/128 (61.72%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 21  LLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSIINSNPECLCGLIS 80
           LL    ++    + + TSC+N L+PCLNY+NGTRDPP SCC+PL+S+I+SNP+CLC LIS
Sbjct: 14  LLVLASAMAFQGRAQDTSCMNRLIPCLNYLNGTRDPPPSCCNPLKSVIDSNPDCLCALIS 73

Query: 81  REGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISLTLQVITLAISTKL 140
           R+GS+RAE AGID+++AQLLP RCGEHVNPLSCLAA N +  +SIS TLQ+I+L  +  L
Sbjct: 74  RDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISSTLQLISLTSTASL 133

Query: 141 IMSSILHF 148
           +MS +LHF
Sbjct: 134 LMSGVLHF 141

[Close]

BLAST of IVF0020202 vs. TAIR 10
Match: AT5G13900.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 3.4e-29
Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 19  MVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSIINSNPECLCGL 78
           +VLL    S G     +  SC+N L PCLNY+NGT++ P+ CC+PL+S+I +NPECLC +
Sbjct: 12  VVLLLVAASSGMRINGQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSVIRNNPECLCRM 71

Query: 79  ISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCL-----AANNTSGLVSISLTLQ--- 138
           IS   S++AE AGID+N+AQ+LPARCGEHVNP++CL      + N+    SI  T     
Sbjct: 72  ISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDRSSSIGNTFSQSY 131

Query: 139 -VITLAISTKLI 142
            + TLAI+  ++
Sbjct: 132 WMTTLAIAATVL 143

[Close]

BLAST of IVF0020202 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 10  KIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNG-TRDPPESCCSPLRSII 69
           K+      + V +    S    AQ+  T+ + ++ PCLNY+ G +  P + CC+ L  ++
Sbjct: 2   KMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVV 61

Query: 70  NSNPECLCGLISREGSNRAEAAGIDINEAQL--LPARCGEHVNPLS-CLAANNTSGLVSI 127
            S+P+CLC +++  GS      GI++N+ Q   LP  C     P+S C       G  S 
Sbjct: 62  QSSPDCLCQVLNGGGSQ----LGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSD 118

[Close]

BLAST of IVF0020202 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 37  TSCVNTLV---PCLNYVNG-TRDPPESCCSPLRSIINSNPECLCGLISREGSNRAEAAGI 96
           +SCV+TL    PCL+Y+ G +  P + CCS L S+I S+P+C+C  ++    N     G+
Sbjct: 28  SSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPN----IGL 87

Query: 97  DINEAQL--LPARCGEHVNPLS-CLAA 117
           +IN  Q   LP  C     PL+ C AA
Sbjct: 88  NINRTQALQLPNACNIQTPPLTQCNAA 110

[Close]

BLAST of IVF0020202 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07
Identity = 35/107 (32.71%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 8   MKKIVAAAAVVMVLLGCGGSIGTMAQN---EKTSCVNTLVPCLNYVNGTR-DPPESCCSP 67
           + K +A    V+VL     S+   AQ    + T+C+  L+PC  Y++     PP SCC P
Sbjct: 3   INKFLAVVVAVVVLY----SVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGP 62

Query: 68  LRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNP 111
           ++ I+  +  CLC  I+       +A  +    A LLP  CG  VNP
Sbjct: 63  MKEIVEKDAPCLC--IAFNNPEVLKALNLTKENALLLPKACG--VNP 101

[Close]

BLAST of IVF0020202 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06
Identity = 40/121 (33.06%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 11  IVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVN-GTRDPPESCCSPLRSIIN 70
           I+A  A+V+     GG+  T  Q      + +L PCL Y+N G+  P  SCC    +++ 
Sbjct: 2   ILAILALVIATFLYGGA--TTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQ 61

Query: 71  SNPECLCGLISREGSNRAEAAGIDINE--AQLLPARCG-EHVNPLSCLAANNTSGLVSIS 128
           S+PECLC +++   SN +   G   N   A  LP  C  +  +P  C    NT G V  +
Sbjct: 62  SSPECLCSVVN---SNESSFYGFKFNRTLALNLPTACNVQTPSPSLC----NTGGNVPTT 113

The following BLAST results are available for this feature:

BLAST of IVF0020202 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFY3	4.8e-28	47.73	Non-specific lipid transfer protein GPI-anchored 30 OS=Arabidopsis thaliana OX=3...	[more]
Q9LJ86	1.6e-07	29.75	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
Q7EB72	3.6e-07	39.08	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]
Q1PFD8	4.0e-06	32.71	Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=37...	[more]
F4HZB9	2.0e-05	33.06	Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of IVF0020202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BMN1	7.9e-74	100.00	lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103491702 PE=3 SV=...	[more]
A0A5A7U4K4	4.0e-70	100.00	Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0L9L7	9.3e-67	92.57	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G250900 PE=3 SV...	[more]
A0A6J1J1M2	1.8e-38	61.24	lipid transfer-like protein VAS OS=Cucurbita maxima OX=3661 GN=LOC111481899 PE=3...	[more]
A0A6J1F9V7	9.1e-38	60.47	lipid transfer-like protein VAS OS=Cucurbita moschata OX=3662 GN=LOC111442128 PE...	[more]

BLAST of IVF0020202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449981.1	1.40e-96	100.00	PREDICTED: lipid transfer-like protein VAS [Cucumis melo]	[more]
KAA0048555.1	5.89e-92	100.00	lipid transfer-like protein VAS [Cucumis melo var. makuwa] >TYK28357.1 lipid tra...	[more]
XP_004145619.1	2.71e-87	92.57	lipid transfer-like protein VAS [Cucumis sativus] >KGN57679.1 hypothetical prote...	[more]
XP_038901700.1	2.12e-63	74.32	non-specific lipid transfer protein GPI-anchored 30 [Benincasa hispida]	[more]
XP_023528269.1	5.63e-51	61.72	lipid transfer-like protein VAS [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0020202 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13900.1	3.4e-29	47.73	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22600.1	1.1e-08	29.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	2.5e-08	39.08	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73560.1	2.8e-07	32.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G03103.1	1.4e-06	33.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 35..51 score: 24.16 coord: 91..108 score: 32.39 coord: 55..69 score: 30.15
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 39..113 e-value: 6.2E-4 score: 29.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 28..113 e-value: 1.2E-15 score: 57.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 37..113 e-value: 3.0E-12 score: 48.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 37..115
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 29..114
None	No IPR available	PANTHER	PTHR33044:SF29	LIPID TRANSFER-LIKE PROTEIN VAS	coord: 29..114
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score: 6.0
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 43..105 e-value: 3.18832E-14 score: 61.2887

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020202.1	IVF0020202.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding