IVF0020137 (gene) Melon (IVF77) v1

Overview


Name	IVF0020137
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein RER1
Location	chr11: 1192528 .. 1195467 (-)
RNA-Seq Expression	IVF0020137
Synteny	IVF0020137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGGATAGGAGGTGAAGCTGCCTCAGCGGCAGGACCTTTGAGCCAGTGGCAGCATGATGTTTCAAGGCTTTATCAATATTATCTGGATAAGATTACTCCACATGCTGTCTACAGATGGATTGGAACCCTTTTATAGTGGCAATTTAGCTTTGAGGGTCTTCTATGTGCAAGGTTCTACATTGTTTCTTATGGTCTGGGTATTTATATACTCAATTTATTGATTGGATTCTTGTCCCCCTTAGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAGGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTAATAATGGAATTTCATTCATGAGCTTTTGCATCATTTGCCTGTTTATATTTCGTTGGTAAACTTTGAAGTTTGCATTTCTGTTGTTTCTTCATTACAAATCTGATTCAGTATCCTGTTTGTCTATTATGTCTAATTCTGGTATTGAAAAGTTGTCAAAATGGTAGGCAGTGGTGAGAGAGGGAACATATAGTGAGGTGTGCATCAGAATAAAAAAGGATTGGGTTATGTTGTGTAAAATCCTTTGTGCACCAAGTAAACTTGTTTGTTTTTGTCTTGTCCATTGTGACCACTACTCTTTCCTGTCAAAAAAAACATCGTGACCGCTACTCTTTGGTGCTTCTTGATGGGCTTTGCTTGTTATGCATGTAGCAACTTTGAGATCCTGAATCCACATGGTCAGCCTTATTCTTTTTCCATATGCGACCAGTGACTTTACATAGTTGTTGATATCTCAAGAATTAGGATAATATGTAATGGAACAGGAAGAGGCATTTTCCTGTGGCTCGGTAATTTAAGCAAGACAGGGAAAGATACAAGTGTTTTTTGGAAGAAGACTATATATTATCGGTTTTCATGAAATTTTGGATGGTTTTAGAGGAACCTGGTCTCATTTAGTCTTACTATGCAGTGTAGGTTAATACTTTCTTTTTGCCTTTTATCTCTTTTCCCTTTTAGCTTCAATTCCTATCTTCTTCTTTCTATGTTTATTTCTTGCTCTAGAAAGTTCTTTGATATTATAGATGAGTGCCTTTTGCCTTCCTATGTTTATTTCTTGCTGTACCATGGTTCTAAAATATTAACCTCTTTGTGAGGTAATCATCTCATATATATATATTATGAAAAATTTACCAGAATAGCACCTGAGAATTGTTTCAAAAAGCCTTCAAATCGAAGCCCACAAAGAAACATGATATTAAAGAAGGGACCAAATCTTGCTAGGGACCCTCTCCACACCTCTAAAAACTCTATTCTTCCACTCGTTCCACACCACCCACAAGATAGCAAACACCCTCGCAAGCCATAGAAAGTGGCCTTTCTCCCCATGAGGCAACTTAAAAAGGGAATTCTCGAGCAACGCTCCAACATCTTTGTGCTGTGTAACCATAGTGCAAAAGGTTTGAAACAAAGAATCCCAAACCAAGCTGACTAACTCACAACGACAAAGAATGTGCTCTGCTCTTCCTCAGCCTTGACAAAGAATGCAATAGAAAGGACGCACGAGGGAGGACAACTTCTCTTAAGTCGATCCATCATGTTAGCCTGCCCGAGAAACCCTAAAATGGATCAGGTTCCAGATGCTCACATTTCTTCTCCCATATCTAGAAGTGTGACCCTAAAGTAAAGAAAGAAGAGCAGCCACCTCCATCATTTCTCTATTAAAAGAGCACGACAGAACCTAAAAGAAAAGGAAAAGGATCTTGCAGTCTACACTAGAAAATCATCAACAAAATTGTTTTTTGGTAGCTAGCAAATGAATGATACGGATGAGGGAACAAATAACAAAGAGGCCTGTCCTCCATTCAATGGTCTTCCAAAAAATAGGTATCTTTCCCTCCCCCACCACACAACGAACAAAATGAATAAATGAAGGGTGCTCTTTTGAAATAATCTTCCACAAGTTTTGATGAGATCCTTTTAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACTGGTCTCTCAATGACCTCCCATCCAATCAAATGTGACCCTTTCTGTTTTCCTTCTTTTCTATCGAAAATCACACATCAACTTCTCCAAGCTTGACAAACCTTGCACGAGCTCTAAAAAGGGAGAAAAAAATAGATAGAGGCGGCTTTTTGCACCTTAAAGGAAAGGCCTTCCTTTAAGTTTCTTCTAGTTTATACCCAGTAACAGAATTTCCCTTGTTCCCTGAACTTTCTCCCTTGCATTAATTTTTTCTTTTGGAAGACCTCTGCCATGCCCTTCAAATCATGGAAGGGTGTGGAACATGTCTAACTGCTTTTTAAAATAATTTCTTATTGTGGAATTTTGTAAACTTCAGAAATATTTATTATTTGCCTCATGGTTGATTAATGGATACTGTTACACACAGTTTACTTGTGAGTTTATGGTAACTCTTCTGTTATTAGAATTGGAATCTTCATTTGATTACTGCTTTTGCACTCTTCTTGCCCGACCCCATAACACTTTTTTTTTTTGGAAGTTATTAGTGTTTGTTTATTTCTCATATAAAATGAAAATTCATGTTTGTAGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTTATGACCTTCTTTTCCATATTTGATGTTCCCGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCTCATATGATCAAGTACAAATACCTACCATTAGTTTTGGAAAGCAGGTGACCTATCCAATACTTCTTATCCATTACACTGCTGTTAAGAGTTTATTAGTCTTGCTTTTGATAAATCTTTCGTGTTGTGGAAACATTGTTTTAAGTTTTGATATTTTGCAGAAGCATGGTGGCAAGAAACCTGCAAGTAGCGTTATCACCAGCGATGATTGA

mRNA sequence

ATGGACGGGATAGGAGGTGAAGCTGCCTCAGCGGCAGGACCTTTGAGCCAGTGGCAGCATGATGTTTCAAGGCTTTATCAATATTATCTGGATAAGATTACTCCACATGCTTGGCAATTTAGCTTTGAGGGTCTTCTATGTGCAAGGTTCTACATTGTTTCTTATGGTCTGGGTATTTATATACTCAATTTATTGATTGGATTCTTGTCCCCCTTAGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAGGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTTATGACCTTCTTTTCCATATTTGATGTTCCCGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCTCATATGATCAAGTACAAATACCTACCATTAAAGCATGGTGGCAAGAAACCTGCAAGTAGCGTTATCACCAGCGATGATTGA

Coding sequence (CDS)

ATGGACGGGATAGGAGGTGAAGCTGCCTCAGCGGCAGGACCTTTGAGCCAGTGGCAGCATGATGTTTCAAGGCTTTATCAATATTATCTGGATAAGATTACTCCACATGCTTGGCAATTTAGCTTTGAGGGTCTTCTATGTGCAAGGTTCTACATTGTTTCTTATGGTCTGGGTATTTATATACTCAATTTATTGATTGGATTCTTGTCCCCCTTAGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAGGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTTATGACCTTCTTTTCCATATTTGATGTTCCCGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCTCATATGATCAAGTACAAATACCTACCATTAAAGCATGGTGGCAAGAAACCTGCAAGTAGCGTTATCACCAGCGATGATTGA

Protein sequence

MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAWQFSFEGLLCARFYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPLKHGGKKPASSVITSDD

Homology

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BLAST of IVF0020137 vs. ExPASy Swiss-Prot
Match: O48671 (Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2)

HSP 1 Score: 243.8 bits (621), Expect = 1.4e-63
Identity = 122/178 (68.54%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---W--QFSFEGLLCAR------ 60
           M+G GG++ S A P+ +  H+  R+YQYYLDK TPH+   W     F  + C R      
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPLKHGGKK 168
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQI+HMIK+KY+P   G +K
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQK 178

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BLAST of IVF0020137 vs. ExPASy Swiss-Prot
Match: O48670 (Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.1e-62
Identity = 124/180 (68.89%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAWQFSFEGLL------CAR----- 60
           MD  GG++ S A P+ Q  H+  R+YQ+YLDK TPHA  + + G L      C R     
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHA-NYRWIGTLVVALIYCLRVYYIQ 60

Query: 61  -FYIVSYGLGIYILNLLIGFLSPLVDPEM-EVSDGPLLPTKGSDEFRPFIRRLPEFKFWY 120
            FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEF+PFIRRLPEFKFWY
Sbjct: 61  GFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWY 120

Query: 121 SFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPLKHGGKK 168
           S TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+P   G +K
Sbjct: 121 SMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQK 179

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BLAST of IVF0020137 vs. ExPASy Swiss-Prot
Match: Q9ZPV7 (Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 4.4e-44
Identity = 91/160 (56.88%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 12  AGPLSQWQHDVSRLYQYYLDKITPHAWQFSFEGLLCARFYI-----------VSYGLGIY 71
           A PL++W+ + S+ +Q YLD+  P+  +     L+ A  YI           +SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE++PF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP 161
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y P
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFP 175

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BLAST of IVF0020137 vs. ExPASy Swiss-Prot
Match: Q9ZWI7 (Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 9.8e-44
Identity = 92/179 (51.40%), Postives = 120/179 (67.04%), Query Frame = 0


Query: 7   EAASAAGPLSQWQHDVSRLYQYYLDKITPHAWQFSFEGLLCA------------RFYIVS 66
           +++S A  +++  H  S+  Q+ LDK  PH   + +   LC              FYI++
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHV-LYRWIACLCVVLIYIVRVYFVEGFYIIT 88

Query: 67  YGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFC 126
           Y +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE+RPF+RRLPEFKFW S  +AF 
Sbjct: 89  YAIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFI 148

Query: 127 IAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPLKHG----GKKPA 170
           I F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+P   G    GKKPA
Sbjct: 149 IGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQYGKKPA 206

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BLAST of IVF0020137 vs. ExPASy Swiss-Prot
Match: P52879 (Protein RER1 homolog OS=Caenorhabditis elegans OX=6239 GN=rer-1 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 0


Query: 13  GPLSQWQHDVSRLYQYYLDKITPHA---WQ--------FSFEGLLCARFYIVSYGLGIYI 72
           G  S++ H +   YQYYLD++TPH    W         F+   +L   FYIV+Y +GIY 
Sbjct: 10  GVTSRFFHSLEVKYQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYY 69

Query: 73  LNLLIGFLSPLVDPEMEV---SDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFV 132
           LNL + FL+P +DP +E     DGP+LP+K +DEFRPF+RRLPEFKFW+SF KA  IA  
Sbjct: 70  LNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAIT 129

Query: 133 MTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPLKHG-----GKKPASSVI 174
            TFF  FDVPVFWPIL+ Y+ +L  LT++RQI HMIKY+Y+P   G     GK+    V+
Sbjct: 130 CTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPFTVGKPRMAGKEDTGKVV 189

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BLAST of IVF0020137 vs. ExPASy TrEMBL
Match: A0A1S3CDN0 (Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103499683 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 165/193 (85.49%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---W--------QFSFEGLLCAR 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA   W         ++        
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL-----KHG 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP      KHG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

[Close]

BLAST of IVF0020137 vs. ExPASy TrEMBL
Match: A0A1S3CE35 (Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103499683 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.5e-83
Identity = 164/192 (85.42%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---W--------QFSFEGLLCAR 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA   W         ++        
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL----KHGG 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP     +HGG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQHGG 180

[Close]

BLAST of IVF0020137 vs. ExPASy TrEMBL
Match: A0A0A0LP91 (Protein RER1 OS=Cucumis sativus OX=3659 GN=Csa_2G248640 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.4e-82
Identity = 164/194 (84.54%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---W--------QFSFEGLLCAR 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA   W         ++        
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL-----KHG 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP      KHG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

[Close]

BLAST of IVF0020137 vs. ExPASy TrEMBL
Match: A0A6J1G7E1 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111451535 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.5e-76
Identity = 153/194 (78.87%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---W--------QFSFEGLLCAR 60
           MDGIGGE ASAA PLSQWQHD+SRLYQYYLDK TPHA   W         ++        
Sbjct: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL-----KHG 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKY+P      K+G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180

[Close]

BLAST of IVF0020137 vs. ExPASy TrEMBL
Match: A0A6J1FS15 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111448292 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.9e-76
Identity = 154/194 (79.38%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---W--------QFSFEGLLCAR 60
           MDGIGGE ASAA PLSQWQHDVSRLYQYYLDK TPHA   W         ++        
Sbjct: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL-----KHG 178
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+P      K+G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180

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BLAST of IVF0020137 vs. NCBI nr
Match: XP_008460948.1 (PREDICTED: protein RER1A isoform X1 [Cucumis melo] >XP_008460949.1 PREDICTED: protein RER1A isoform X1 [Cucumis melo])

HSP 1 Score: 318 bits (814), Expect = 1.67e-108
Identity = 165/193 (85.49%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---WQ--------FSFEGLLCAR 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA   W         ++        
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL-----KHG 177
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP      KHG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

[Close]

BLAST of IVF0020137 vs. NCBI nr
Match: XP_008460950.1 (PREDICTED: protein RER1A isoform X2 [Cucumis melo])

HSP 1 Score: 317 bits (811), Expect = 4.63e-108
Identity = 164/192 (85.42%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---WQ--------FSFEGLLCAR 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA   W         ++        
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL----KHGG 177
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP     +HGG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQHGG 180

[Close]

BLAST of IVF0020137 vs. NCBI nr
Match: XP_004148836.1 (protein RER1A isoform X3 [Cucumis sativus] >KGN61806.1 hypothetical protein Csa_006302 [Cucumis sativus])

HSP 1 Score: 313 bits (801), Expect = 1.66e-106
Identity = 164/194 (84.54%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---WQ--------FSFEGLLCAR 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA   W         ++        
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL-----KHG 177
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP      KHG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

[Close]

BLAST of IVF0020137 vs. NCBI nr
Match: XP_031737203.1 (protein RER1A isoform X4 [Cucumis sativus])

HSP 1 Score: 311 bits (798), Expect = 4.59e-106
Identity = 163/193 (84.46%), Postives = 167/193 (86.53%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---WQ--------FSFEGLLCAR 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA   W         ++        
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL----KHGG 177
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP     +HGG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQHGG 180

[Close]

BLAST of IVF0020137 vs. NCBI nr
Match: XP_031737201.1 (protein RER1A isoform X1 [Cucumis sativus])

HSP 1 Score: 311 bits (797), Expect = 7.75e-106
Identity = 164/198 (82.83%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---WQ--------FSFEGLLCAR 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA   W         ++        
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPL-------- 177
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP         
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQVTY 180

[Close]

BLAST of IVF0020137 vs. TAIR 10
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B )

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-64
Identity = 122/178 (68.54%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHA---W--QFSFEGLLCAR------ 60
           M+G GG++ S A P+ +  H+  R+YQYYLDK TPH+   W     F  + C R      
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPLKHGGKK 168
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQI+HMIK+KY+P   G +K
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQK 178

[Close]

BLAST of IVF0020137 vs. TAIR 10
Match: AT4G39220.1 (Rer1 family protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.5e-63
Identity = 124/180 (68.89%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAWQFSFEGLL------CAR----- 60
           MD  GG++ S A P+ Q  H+  R+YQ+YLDK TPHA  + + G L      C R     
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHA-NYRWIGTLVVALIYCLRVYYIQ 60

Query: 61  -FYIVSYGLGIYILNLLIGFLSPLVDPEM-EVSDGPLLPTKGSDEFRPFIRRLPEFKFWY 120
            FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEF+PFIRRLPEFKFWY
Sbjct: 61  GFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWY 120

Query: 121 SFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPLKHGGKK 168
           S TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+P   G +K
Sbjct: 121 SMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQK 179

[Close]

BLAST of IVF0020137 vs. TAIR 10
Match: AT2G18240.1 (Rer1 family protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-45
Identity = 91/160 (56.88%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 12  AGPLSQWQHDVSRLYQYYLDKITPHAWQFSFEGLLCARFYI-----------VSYGLGIY 71
           A PL++W+ + S+ +Q YLD+  P+  +     L+ A  YI           +SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE++PF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP 161
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y P
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFP 175

[Close]

BLAST of IVF0020137 vs. TAIR 10
Match: AT2G18240.2 (Rer1 family protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-45
Identity = 91/160 (56.88%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 12  AGPLSQWQHDVSRLYQYYLDKITPHAWQFSFEGLLCARFYI-----------VSYGLGIY 71
           A PL++W+ + S+ +Q YLD+  P+  +     L+ A  YI           +SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE++PF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLP 161
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y P
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFP 175

[Close]

BLAST of IVF0020137 vs. TAIR 10
Match: AT2G23310.2 (Rer1 family protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.3e-45
Identity = 92/178 (51.69%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 7   EAASAAGPLSQWQHDVSRLYQYYLDKITPHAWQFSFEGLLCA------------RFYIVS 66
           +++S A  +++  H  S+  Q+ LDK  PH   + +   LC              FYI++
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHV-LYRWIACLCVVLIYIVRVYFVEGFYIIT 88

Query: 67  YGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFC 126
           Y +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE+RPF+RRLPEFKFW S  +AF 
Sbjct: 89  YAIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFI 148

Query: 127 IAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPLKHG---GKKPA 170
           I F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+P   G   GKKPA
Sbjct: 149 IGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKYGKKPA 205

The following BLAST results are available for this feature:

BLAST of IVF0020137 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48671	1.4e-63	68.54	Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2	[more]
O48670	2.1e-62	68.89	Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1	[more]
Q9ZPV7	4.4e-44	56.88	Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2	[more]
Q9ZWI7	9.8e-44	51.40	Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1	[more]
P52879	1.7e-40	50.00	Protein RER1 homolog OS=Caenorhabditis elegans OX=6239 GN=rer-1 PE=3 SV=1	[more]

BLAST of IVF0020137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDN0	2.9e-83	85.49	Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103499683 PE=3 SV=1	[more]
A0A1S3CE35	6.5e-83	85.42	Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103499683 PE=3 SV=1	[more]
A0A0A0LP91	9.4e-82	84.54	Protein RER1 OS=Cucumis sativus OX=3659 GN=Csa_2G248640 PE=3 SV=1	[more]
A0A6J1G7E1	3.5e-76	78.87	Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111451535 PE=3 SV=1	[more]
A0A6J1FS15	5.9e-76	79.38	Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111448292 PE=3 SV=1	[more]

BLAST of IVF0020137 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460948.1	1.67e-108	85.49	PREDICTED: protein RER1A isoform X1 [Cucumis melo] >XP_008460949.1 PREDICTED: pr...	[more]
XP_008460950.1	4.63e-108	85.42	PREDICTED: protein RER1A isoform X2 [Cucumis melo]	[more]
XP_004148836.1	1.66e-106	84.54	protein RER1A isoform X3 [Cucumis sativus] >KGN61806.1 hypothetical protein Csa_...	[more]
XP_031737203.1	4.59e-106	84.46	protein RER1A isoform X4 [Cucumis sativus]	[more]
XP_031737201.1	7.75e-106	82.83	protein RER1A isoform X1 [Cucumis sativus]	[more]

BLAST of IVF0020137 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21600.1	1.0e-64	68.54	endoplasmatic reticulum retrieval protein 1B	[more]
AT4G39220.1	1.5e-63	68.89	Rer1 family protein	[more]
AT2G18240.1	3.1e-45	56.88	Rer1 family protein	[more]
AT2G18240.2	3.1e-45	56.88	Rer1 family protein	[more]
AT2G23310.2	5.3e-45	51.69	Rer1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004932	Retrieval of early ER protein Rer1	PFAM	PF03248	Rer1	coord: 18..166 e-value: 3.5E-57 score: 192.9
IPR004932	Retrieval of early ER protein Rer1	PIRSF	PIRSF016013	AtER_Rer1p	coord: 1..176 e-value: 6.4E-66 score: 219.6
IPR004932	Retrieval of early ER protein Rer1	PANTHER	PTHR10743	PROTEIN RER1	coord: 1..167
None	No IPR available	PANTHER	PTHR10743:SF17	PROTEIN RER1A	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020137.2	IVF0020137.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006621	protein retention in ER lumen
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0016021	integral component of membrane