IVF0020098 (gene) Melon (IVF77) v1

Overview
NameIVF0020098
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDrebrin-like
Locationchr11: 12916526 .. 12916786 (-)
RNA-Seq ExpressionIVF0020098
SyntenyIVF0020098
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAGACTATTGATGACCCACTCCAACGGGAAAAAGAAGAAGTCCCTGAGGACGTTGGTGAGAAAAGTCTCCCCTCATCGGGTAAATCAATCCCAGAGGCCTCAACACAGTTAGACAAGCTAAAGGAGGCGGTGAGAGAAGAGGAAGAAGTTAGCGCAGACTATGTCTTTATGTTCATAGATGAGTACATTTGTAAACCATTAGAGAGAGGATTTAAAGATATATTCCAGTGCAAGAGTAACTTGCAAGAAATGTAA

mRNA sequence

ATGAAGGAGACTATTGATGACCCACTCCAACGGGAAAAAGAAGAAGTCCCTGAGGACGTTGGTGAGAAAAGTCTCCCCTCATCGGGTAAATCAATCCCAGAGGCCTCAACACAGTTAGACAAGCTAAAGGAGGCGGTGAGAGAAGAGGAAGAAGTTAGCGCAGACTATGTCTTTATGTTCATAGATGAGTACATTTGTAAACCATTAGAGAGAGGATTTAAAGATATATTCCAGTGCAAGAGTAACTTGCAAGAAATGTAA

Coding sequence (CDS)

ATGAAGGAGACTATTGATGACCCACTCCAACGGGAAAAAGAAGAAGTCCCTGAGGACGTTGGTGAGAAAAGTCTCCCCTCATCGGGTAAATCAATCCCAGAGGCCTCAACACAGTTAGACAAGCTAAAGGAGGCGGTGAGAGAAGAGGAAGAAGTTAGCGCAGACTATGTCTTTATGTTCATAGATGAGTACATTTGTAAACCATTAGAGAGAGGATTTAAAGATATATTCCAGTGCAAGAGTAACTTGCAAGAAATGTAA

Protein sequence

MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMFIDEYICKPLERGFKDIFQCKSNLQEM
Homology
BLAST of IVF0020098 vs. ExPASy TrEMBL
Match: A0A5D3CJ32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001300 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF 60
          MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF
Sbjct: 1  MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF 60

Query: 61 IDEYICKPLERGFKDIFQCKSNLQEM 87
          IDEYICKPLERGFKDIFQCKSNLQEM
Sbjct: 61 IDEYICKPLERGFKDIFQCKSNLQEM 86

BLAST of IVF0020098 vs. ExPASy TrEMBL
Match: A0A5A7V5X0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001410 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.9e-26
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1   MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF 60
           +KE +DDPLQ EKEE+PEDV EKSLPS  K I E   +L+KLKEA++EEEEV A+YVF F
Sbjct: 114 LKEIVDDPLQGEKEELPEDVSEKSLPSPPKPILEVVVRLEKLKEAMKEEEEVDANYVFKF 173

Query: 61  IDEYICKPLERGFKDIFQCKSNLQEM 87
           +DE+ICKPLERGF+DIFQC+SNLQEM
Sbjct: 174 MDEFICKPLERGFEDIFQCQSNLQEM 199

BLAST of IVF0020098 vs. ExPASy TrEMBL
Match: A0A5D3BE51 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00020 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.3e-24
Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 0

Query: 1   MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF 60
           +KE +DDPLQ EKEE+PEDV EKSLPS  K I E   +L+KLKEA++EEEEV  +YVF F
Sbjct: 129 LKEIVDDPLQGEKEELPEDVSEKSLPSPPKPILEVVVRLEKLKEAMKEEEEVDPNYVFKF 188

Query: 61  IDEYICKPLERGFKDIFQCKSNLQEM 87
           +DE+ICK LERGF+DIFQC+SNLQEM
Sbjct: 189 MDEFICKLLERGFEDIFQCQSNLQEM 214

BLAST of IVF0020098 vs. ExPASy TrEMBL
Match: A0A5D3BRW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00470 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.4e-21
Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 0

Query: 2   KETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMFI 61
           KETIDDP+Q EKE++ EDVGEKSLPS  KSIPE  T LDKLKE VREE+EV  DYV  F+
Sbjct: 101 KETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVREEKEVDMDYVVQFM 160

Query: 62  DEYICKPLERGFKDIF 78
           DE+ICKPLE+GF+DIF
Sbjct: 161 DEFICKPLEKGFEDIF 176

BLAST of IVF0020098 vs. ExPASy TrEMBL
Match: A0A5A7U2H3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001450 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.7e-21
Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 0

Query: 2   KETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMFI 61
           KETIDDP+Q EKE++ EDVGEKSLPS  KSIPE  T LDKLKE V+EE+EV  DYV  F+
Sbjct: 101 KETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVKEEKEVDMDYVVQFM 160

Query: 62  DEYICKPLERGFKDIF 78
           DE+ICKPLE+GF+DIF
Sbjct: 161 DEFICKPLEKGFEDIF 176

BLAST of IVF0020098 vs. NCBI nr
Match: TYK11947.1 (hypothetical protein E5676_scaffold177G001300 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (424), Expect = 3.42e-52
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF 60
          MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF
Sbjct: 1  MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF 60

Query: 61 IDEYICKPLERGFKDIFQCKSNLQEM 86
          IDEYICKPLERGFKDIFQCKSNLQEM
Sbjct: 61 IDEYICKPLERGFKDIFQCKSNLQEM 86

BLAST of IVF0020098 vs. NCBI nr
Match: KAA0062630.1 (hypothetical protein E6C27_scaffold79G001410 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (311), Expect = 1.65e-33
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1   MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF 60
           +KE +DDPLQ EKEE+PEDV EKSLPS  K I E   +L+KLKEA++EEEEV A+YVF F
Sbjct: 114 LKEIVDDPLQGEKEELPEDVSEKSLPSPPKPILEVVVRLEKLKEAMKEEEEVDANYVFKF 173

Query: 61  IDEYICKPLERGFKDIFQCKSNLQEM 86
           +DE+ICKPLERGF+DIFQC+SNLQEM
Sbjct: 174 MDEFICKPLERGFEDIFQCQSNLQEM 199

BLAST of IVF0020098 vs. NCBI nr
Match: TYJ98052.1 (hypothetical protein E5676_scaffold369G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (296), Expect = 1.18e-30
Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 0

Query: 1   MKETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMF 60
           +KE +DDPLQ EKEE+PEDV EKSLPS  K I E   +L+KLKEA++EEEEV  +YVF F
Sbjct: 129 LKEIVDDPLQGEKEELPEDVSEKSLPSPPKPILEVVVRLEKLKEAMKEEEEVDPNYVFKF 188

Query: 61  IDEYICKPLERGFKDIFQCKSNLQEM 86
           +DE+ICK LERGF+DIFQC+SNLQEM
Sbjct: 189 MDEFICKLLERGFEDIFQCQSNLQEM 214

BLAST of IVF0020098 vs. NCBI nr
Match: TYK02157.1 (hypothetical protein E5676_scaffold388G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 109 bits (272), Expect = 6.63e-28
Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 0

Query: 2   KETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMFI 61
           KETIDDP+Q EKE++ EDVGEKSLPS  KSIPE  T LDKLKE VREE+EV  DYV  F+
Sbjct: 101 KETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVREEKEVDMDYVVQFM 160

Query: 62  DEYICKPLERGFKDIF 77
           DE+ICKPLE+GF+DIF
Sbjct: 161 DEFICKPLEKGFEDIF 176

BLAST of IVF0020098 vs. NCBI nr
Match: KAA0047875.1 (hypothetical protein E6C27_scaffold133G001450 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (269), Expect = 1.88e-27
Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 0

Query: 2   KETIDDPLQREKEEVPEDVGEKSLPSSGKSIPEASTQLDKLKEAVREEEEVSADYVFMFI 61
           KETIDDP+Q EKE++ EDVGEKSLPS  KSIPE  T LDKLKE V+EE+EV  DYV  F+
Sbjct: 101 KETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVKEEKEVDMDYVVQFM 160

Query: 62  DEYICKPLERGFKDIF 77
           DE+ICKPLE+GF+DIF
Sbjct: 161 DEFICKPLEKGFEDIF 176

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CJ326.2e-39100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V5X07.9e-2672.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BE514.3e-2469.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BRW73.4e-2173.68Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U2H37.7e-2172.37Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK11947.13.42e-52100.00hypothetical protein E5676_scaffold177G001300 [Cucumis melo var. makuwa][more]
KAA0062630.11.65e-3372.09hypothetical protein E6C27_scaffold79G001410 [Cucumis melo var. makuwa][more]
TYJ98052.11.18e-3069.77hypothetical protein E5676_scaffold369G00020 [Cucumis melo var. makuwa][more]
TYK02157.16.63e-2873.68hypothetical protein E5676_scaffold388G00470 [Cucumis melo var. makuwa][more]
KAA0047875.11.88e-2772.37hypothetical protein E6C27_scaffold133G001450 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0020098.1IVF0020098.1mRNA