IVF0020092 (gene) Melon (IVF77) v1

Overview


Name	IVF0020092
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Glutaredoxin
Location	chr11: 11080796 .. 11081499 (+)
RNA-Seq Expression	IVF0020092
Synteny	IVF0020092

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGAACCTGTACTCTTTACAAATCTAAAATCATGCACCAAGCAATCCCTTACCGATCATGGCAATCGATTGACACAAAACAAACTACATTAGCAATGAGACCACCATGGGCCGGCAGCGTCGGTGGATCAGCATCCATGCCGTCCGAGGGTGGAGGAAGGAGACGGGACGTGGTTGCGTCAGTGTCGGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGATTGGGGGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACATGAATCTGGAGTGCTTAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTGTTTATTGGAGGAACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTGAAACAGGCTGGAGCTTTGTGGCTTTAATTTTTCTTTTTTCCTTATATCAATCCTCAATTTTCTTTTTATTATTTTTTCCTTTTATCAAACAGGGATGCTTTTTGTTTGCTATCAATTTTTGTTGTGCCATCTGTTTTCCTGTTTGTCAACAAGGGGATTCTTTTTTTTCTTGTTAGAGTTCGTAAATGGAATCGTTAACTATTGATGAAAACATTTGTTAATACTATAACAAATTGGTCTTTTCTTTTTTAA

mRNA sequence

AAACGAACCTGTACTCTTTACAAATCTAAAATCATGCACCAAGCAATCCCTTACCGATCATGGCAATCGATTGACACAAAACAAACTACATTAGCAATGAGACCACCATGGGCCGGCAGCGTCGGTGGATCAGCATCCATGCCGTCCGAGGGTGGAGGAAGGAGACGGGACGTGGTTGCGTCAGTGTCGGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGATTGGGGGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACATGAATCTGGAGTGCTTAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTGTTTATTGGAGGAACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTGAAACAGGCTGGAGCTTTGTGGCTTTAATTTTTCTTTTTTCCTTATATCAATCCTCAATTTTCTTTTTATTATTTTTTCCTTTTATCAAACAGGGATGCTTTTTGTTTGCTATCAATTTTTGTTGTGCCATCTGTTTTCCTGTTTGTCAACAAGGGGATTCTTTTTTTTCTTGTTAGAGTTCGTAAATGGAATCGTTAACTATTGATGAAAACATTTGTTAATACTATAACAAATTGGTCTTTTCTTTTTTAA

Coding sequence (CDS)

ATGCACCAAGCAATCCCTTACCGATCATGGCAATCGATTGACACAAAACAAACTACATTAGCAATGAGACCACCATGGGCCGGCAGCGTCGGTGGATCAGCATCCATGCCGTCCGAGGGTGGAGGAAGGAGACGGGACGTGGTTGCGTCAGTGTCGGAGAGTGCGGCGATAGTGTTTGCTAGAAGAGGATGCTGTATGAGCCATGTGGTAAAGCGTCTTCTATTAGGATTGGGGGCCAATCCGGCGGTGTATGAAGTGGATGAAGAACATGAATCTGGAGTGCTTAAGGAATTGGAGGCTTTTGCTAAATCTTCTAATGTTAATTTGCAATTGCCGGCTGTGTTTATTGGAGGAACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTGA

Protein sequence

MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI

Homology

[Close]

BLAST of IVF0020092 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.7e-28
Identity = 65/106 (61.32%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 35  SMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGV 94
           S+ ++G G R  +V  V E+A IV  RRGCCM HVV+RLLLGLG NPAV E+DEE E  V
Sbjct: 25  SLKTQGNGERVRMV--VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEV 84

Query: 95  LKELEAF-AKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 140
           L ELE    +     ++LPAV++GG LFGGLDRVMATHISG+LVPI
Sbjct: 85  LSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPI 128

[Close]

BLAST of IVF0020092 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.7e-23
Identity = 66/143 (46.15%), Postives = 84/143 (58.74%), Query Frame = 0


Query: 1   MHQAIPY---RSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAI 60
           M+QAIPY   R+W +  ++  T A  PP           P    G   +V  +V+E   +
Sbjct: 1   MYQAIPYNANRAWPAA-SRPATAAAAPP-----------PPPPRGEEEEVRRAVAECPVV 60

Query: 61  VFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHE-SGVLKELEAFAKSSNVNLQLPAVFI 120
           V  R GCC+SHVVKRLL GLG NPAV+EV  E E +GV+        +    + LPAVF+
Sbjct: 61  VVGRSGCCLSHVVKRLLQGLGVNPAVHEVAGEAELAGVV--------AGGGGVALPAVFV 120

Query: 121 GGTLFGGLDRVMATHISGDLVPI 140
           GG L GGLDR+MA HISG+LVPI
Sbjct: 121 GGRLLGGLDRLMAVHISGELVPI 123

[Close]

BLAST of IVF0020092 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.1e-21
Identity = 68/154 (44.16%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSV---------------GGSASMPSEGGGRRR 60
           M+QAIPY S        T   +RP  A SV               GG A +  E      
Sbjct: 1   MYQAIPYSS--------TRPWLRPEPAASVVDVVKVETTTAVAGRGGEAEVVGE--EEAA 60

Query: 61  DVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSS 120
           +V  +V+ES  +V  RRGCC+ HVVKRLL GLG NPAV+EV  E        L+    + 
Sbjct: 61  EVRRAVAESPVLVVGRRGCCLIHVVKRLLQGLGVNPAVHEVAGE------AALKGVVPAG 120

Query: 121 NVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 140
                LPAVF+GG L GGLDR+MA HISG+LVPI
Sbjct: 121 GEAAALPAVFVGGKLLGGLDRLMAVHISGELVPI 138

[Close]

BLAST of IVF0020092 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.5e-19
Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 33  SASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHES 92
           +A+M +      R+V  +V E   +V  RRGCCM+HV +RLLLG GANPAV EV ++ + 
Sbjct: 7   AAAMAAAAADEEREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDDADP 66

Query: 93  GVLKELEAFAK--------------SSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVP 140
             L +    A+                   +  PAVFIGG L GGLDR+MA H++G+LVP
Sbjct: 67  AALVDAALQARRRKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGELVP 126

[Close]

BLAST of IVF0020092 vs. ExPASy Swiss-Prot
Match: Q84TF4 (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 8.0e-17
Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 32  GSASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHE 91
           GS    S    R  ++V  V E+A +VFARRGCC+ HV KRLLL  G NP V E+ EE  
Sbjct: 43  GSPKPTSISNKRSSNLV--VMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDN 102

Query: 92  SGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVP 139
           +        +    +   +LP ++IGG LFGGL+ +MA HI+GDLVP
Sbjct: 103 NN-------YDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVP 140

[Close]

BLAST of IVF0020092 vs. ExPASy TrEMBL
Match: A0A5D3CE70 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00610 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.0e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPI 140
           FGGLDRVMATHISGDLVPI
Sbjct: 121 FGGLDRVMATHISGDLVPI 139

[Close]

BLAST of IVF0020092 vs. ExPASy TrEMBL
Match: A0A1S3C224 (glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.0e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPI 140
           FGGLDRVMATHISGDLVPI
Sbjct: 121 FGGLDRVMATHISGDLVPI 139

[Close]

BLAST of IVF0020092 vs. ExPASy TrEMBL
Match: A0A5A7VGI4 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001510 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.5e-71
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGV+KELEAFAKSSNVNLQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPI 140
           FGGLDRVMATHISGDLVPI
Sbjct: 121 FGGLDRVMATHISGDLVPI 139

[Close]

BLAST of IVF0020092 vs. ExPASy TrEMBL
Match: U3RBI7 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX6 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.5e-66
Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSV--GGSASMPSEGGGRRRDVVASVSESAAIV 60
           MHQAIPYRSWQSIDTKQTTL+MRPPWA +V  G +ASMPSEGGGRRRDVVASVSESAAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGG 120
           FARRGCCMSHVVKRLLLGLGANPAVYEVDEE ESGVLKELEAFAKSSNVNLQLPAVFIGG
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

Query: 121 TLFGGLDRVMATHISGDLVPI 140
           TLFGGLDRVMATHISGDLVPI
Sbjct: 121 TLFGGLDRVMATHISGDLVPI 141

[Close]

BLAST of IVF0020092 vs. ExPASy TrEMBL
Match: A0A6J1JFY3 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111484142 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.8e-57
Identity = 117/139 (84.17%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQ TL+MR  W    GGSAS  +EGGG R DV+ASVSE+AAIVFA
Sbjct: 27  MHQAIPYRSWQSIDTKQGTLSMRSAWG---GGSASATAEGGGSRSDVIASVSENAAIVFA 86

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EE ESGVLKELEAFAKS N  +QLPAVFIGGTL
Sbjct: 87  RRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTL 146

Query: 121 FGGLDRVMATHISGDLVPI 140
           FGGLDRVMATHISG+LVPI
Sbjct: 147 FGGLDRVMATHISGELVPI 162

[Close]

BLAST of IVF0020092 vs. NCBI nr
Match: XP_008455946.1 (PREDICTED: glutaredoxin-C9-like [Cucumis melo] >TYK09572.1 glutaredoxin-C9-like [Cucumis melo var. makuwa])

HSP 1 Score: 279 bits (714), Expect = 1.32e-94
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPI 139
           FGGLDRVMATHISGDLVPI
Sbjct: 121 FGGLDRVMATHISGDLVPI 139

[Close]

BLAST of IVF0020092 vs. NCBI nr
Match: KAA0067472.1 (glutaredoxin-C9-like [Cucumis melo var. makuwa])

HSP 1 Score: 278 bits (711), Expect = 3.79e-94
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGV+KELEAFAKSSNVNLQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPI 139
           FGGLDRVMATHISGDLVPI
Sbjct: 121 FGGLDRVMATHISGDLVPI 139

[Close]

BLAST of IVF0020092 vs. NCBI nr
Match: NP_001274138.1 (glutaredoxin-C9-like [Cucumis sativus] >AGX01498.1 glutaredoxin [Cucumis sativus] >KAE8652271.1 hypothetical protein Csa_022267 [Cucumis sativus])

HSP 1 Score: 263 bits (672), Expect = 3.59e-88
Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSV--GGSASMPSEGGGRRRDVVASVSESAAIV 60
           MHQAIPYRSWQSIDTKQTTL+MRPPWA +V  G +ASMPSEGGGRRRDVVASVSESAAIV
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSMRPPWAATVVGGSAASMPSEGGGRRRDVVASVSESAAIV 60

Query: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGG 120
           FARRGCCMSHVVKRLLLGLGANPAVYEVDEE ESGVLKELEAFAKSSNVNLQLPAVFIGG
Sbjct: 61  FARRGCCMSHVVKRLLLGLGANPAVYEVDEEQESGVLKELEAFAKSSNVNLQLPAVFIGG 120

Query: 121 TLFGGLDRVMATHISGDLVPI 139
           TLFGGLDRVMATHISGDLVPI
Sbjct: 121 TLFGGLDRVMATHISGDLVPI 141

[Close]

BLAST of IVF0020092 vs. NCBI nr
Match: XP_038901995.1 (glutaredoxin-C9-like [Benincasa hispida])

HSP 1 Score: 249 bits (635), Expect = 1.33e-82
Identity = 125/139 (89.93%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQTTL+ RPPW G   GSAS  +EGGG R DV+ASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSTRPPWGG---GSASATAEGGGSRSDVIASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGV+KELEAFAKSSNV LQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVKLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPI 139
           FGGLDRVMATHISGDLVPI
Sbjct: 121 FGGLDRVMATHISGDLVPI 136

[Close]

BLAST of IVF0020092 vs. NCBI nr
Match: XP_022986394.1 (glutaredoxin-C9-like [Cucurbita maxima])

HSP 1 Score: 232 bits (591), Expect = 1.61e-75
Identity = 117/139 (84.17%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQ TL+MR  W G   GSAS  +EGGG R DV+ASVSE+AAIVFA
Sbjct: 27  MHQAIPYRSWQSIDTKQGTLSMRSAWGG---GSASATAEGGGSRSDVIASVSENAAIVFA 86

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EE ESGVLKELEAFAKS N  +QLPAVFIGGTL
Sbjct: 87  RRGCCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTL 146

Query: 121 FGGLDRVMATHISGDLVPI 139
           FGGLDRVMATHISG+LVPI
Sbjct: 147 FGGLDRVMATHISGELVPI 162

[Close]

BLAST of IVF0020092 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.5e-29
Identity = 65/106 (61.32%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 35  SMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGV 94
           S+ ++G G R  +V  V E+A IV  RRGCCM HVV+RLLLGLG NPAV E+DEE E  V
Sbjct: 25  SLKTQGNGERVRMV--VEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEV 84

Query: 95  LKELEAF-AKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 140
           L ELE    +     ++LPAV++GG LFGGLDRVMATHISG+LVPI
Sbjct: 85  LSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPI 128

[Close]

BLAST of IVF0020092 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 88.2 bits (217), Expect = 5.7e-18
Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 32  GSASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHE 91
           GS    S    R  ++V  V E+A +VFARRGCC+ HV KRLLL  G NP V E+ EE  
Sbjct: 43  GSPKPTSISNKRSSNLV--VMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDN 102

Query: 92  SGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVP 139
           +        +    +   +LP ++IGG LFGGL+ +MA HI+GDLVP
Sbjct: 103 NN-------YDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVP 140

[Close]

BLAST of IVF0020092 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 6.9e-16
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 51  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQ 110
           +SE + ++F++  CCMSH +K L L LG NP +YE+DE       KE+E        +  
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRG---KEIEHALAQLGCSPT 67

Query: 111 LPAVFIGGTLFGGLDRVMATHISGDLVPI 140
           +P VFIGG L GG ++VM+ H++  LVP+
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPM 93

[Close]

BLAST of IVF0020092 vs. TAIR 10
Match: AT1G03850.1 (Glutaredoxin family protein )

HSP 1 Score: 80.9 bits (198), Expect = 9.1e-16
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 32  GSASMPSEGGGRRRDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHE 91
           GS    S    R  ++V  V E+A +VFARRGCC+ HV KRLLL  G NP V E+ EE  
Sbjct: 43  GSPKPTSISNKRSSNLV--VMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDN 102

Query: 92  SGVLKELEAFAKSSNVNLQLPAVFIGGTLFGGLDRVMATHISGDLVPI 140
           +        +    +   +LP ++IGG LFGGL+ +MA HI+G  + I
Sbjct: 103 NN-------YDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGHSIKI 141

[Close]

BLAST of IVF0020092 vs. TAIR 10
Match: AT4G15660.1 (Thioredoxin superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 9.1e-16
Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 51  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQ 110
           +SE + ++F+   CCMSH +K L L LG NP +YE+DE +     KE+E        +  
Sbjct: 8   ISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRG---KEIEYALAQLGCSPT 67

Query: 111 LPAVFIGGTLFGGLDRVMATHISGDLVPI 140
           +P VFIGG L GG ++VM+ H++  L+P+
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLIPM 93

The following BLAST results are available for this feature:

BLAST of IVF0020092 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGP6	7.7e-28	61.32	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
P0C291	9.7e-23	46.15	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]
Q5QLR2	9.1e-21	44.16	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2...	[more]
Q0JP62	8.5e-19	41.32	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2...	[more]
Q84TF4	8.0e-17	45.79	Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2	[more]

BLAST of IVF0020092 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CE70	2.0e-71	100.00	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757...	[more]
A0A1S3C224	2.0e-71	100.00	glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1	[more]
A0A5A7VGI4	4.5e-71	99.28	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G...	[more]
U3RBI7	1.5e-66	94.33	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX6 PE=2 SV=1	[more]
A0A6J1JFY3	4.8e-57	84.17	glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111484142 PE=3 SV=1	[more]

BLAST of IVF0020092 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455946.1	1.32e-94	100.00	PREDICTED: glutaredoxin-C9-like [Cucumis melo] >TYK09572.1 glutaredoxin-C9-like ...	[more]
KAA0067472.1	3.79e-94	99.28	glutaredoxin-C9-like [Cucumis melo var. makuwa]	[more]
NP_001274138.1	3.59e-88	94.33	glutaredoxin-C9-like [Cucumis sativus] >AGX01498.1 glutaredoxin [Cucumis sativus...	[more]
XP_038901995.1	1.33e-82	89.93	glutaredoxin-C9-like [Benincasa hispida]	[more]
XP_022986394.1	1.61e-75	84.17	glutaredoxin-C9-like [Cucurbita maxima]	[more]

BLAST of IVF0020092 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28480.1	5.5e-29	61.32	Thioredoxin superfamily protein	[more]
AT1G03850.2	5.7e-18	45.79	Glutaredoxin family protein	[more]
AT4G15700.1	6.9e-16	41.57	Thioredoxin superfamily protein	[more]
AT1G03850.1	9.1e-16	42.59	Glutaredoxin family protein	[more]
AT4G15660.1	9.1e-16	40.45	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 45..139 e-value: 1.7E-19 score: 71.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..43
None	No IPR available	PANTHER	PTHR10168:SF219	GLUTAREDOXIN-C9	coord: 44..139
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 44..139 score: 15.928486
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 55..139 e-value: 4.32377E-26 score: 91.8324
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 57..120 e-value: 1.6E-7 score: 31.5
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 49..139 e-value: 9.1E-32 score: 107.0
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 44..139
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 50..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020092.2	IVF0020092.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity