IVF0020080 (gene) Melon (IVF77) v1

Overview
NameIVF0020080
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDUF761 domain-containing protein
Locationchr01: 31261925 .. 31262478 (-)
RNA-Seq ExpressionIVF0020080
SyntenyIVF0020080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCTTTTTCCATCAAACAAATTTATTAGTTATTATACATTATGAAGAAGAGCTCCGAATTACCAACTGTCTCTGCCGCGGCCGGTGGTATTAATAAGCTGCAGCCACCGCCGTCTCCGTCGTCCCCTCTCCGTGGCTGCGGCGGAGAGAGGAGGAAATTGGAGAGGACGGTGACGGTGACGGTGACGGAAGACGTCGATGAAAGTGCTGAAGCTTTCATTAAGAAGTTTAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAGAATTCTGGCTGGAGAAACTTGAATTATTATTTCCTTTTTTCTTTTTTCTTTTTATTTAATCGTCTTTAATTATTATATATGTTTAATTAATTAATATTTACCACTCTAATAATAAAGGGATTTGTGTATTTGTGTTTATGAATTTATTATAAATGAATGGTTATTTATTATTATTGTTGTTATACAAAAATTCGTATGATTTATATTGAAAAGACATGTACTTCGTTGTAATAGACATTCATAAAAGTCGATAGATATTAATAATTTATATATG

mRNA sequence

CTCCTTTTTCCATCAAACAAATTTATTAGTTATTATACATTATGAAGAAGAGCTCCGAATTACCAACTGTCTCTGCCGCGGCCGGTGGTATTAATAAGCTGCAGCCACCGCCGTCTCCGTCGTCCCCTCTCCGTGGCTGCGGCGGAGAGAGGAGGAAATTGGAGAGGACGGTGACGGTGACGGTGACGGAAGACGTCGATGAAAGTGCTGAAGCTTTCATTAAGAAGTTTAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAGAATTCTGGCTGGAGAAACTTGAATTATTATTTCCTTTTTTCTTTTTTCTTTTTATTTAATCGTCTTTAATTATTATATATGTTTAATTAATTAATATTTACCACTCTAATAATAAAGGGATTTGTGTATTTGTGTTTATGAATTTATTATAAATGAATGGTTATTTATTATTATTGTTGTTATACAAAAATTCGTATGATTTATATTGAAAAGACATGTACTTCGTTGTAATAGACATTCATAAAAGTCGATAGATATTAATAATTTATATATG

Coding sequence (CDS)

ATGAAGAAGAGCTCCGAATTACCAACTGTCTCTGCCGCGGCCGGTGGTATTAATAAGCTGCAGCCACCGCCGTCTCCGTCGTCCCCTCTCCGTGGCTGCGGCGGAGAGAGGAGGAAATTGGAGAGGACGGTGACGGTGACGGTGACGGAAGACGTCGATGAAAGTGCTGAAGCTTTCATTAAGAAGTTTAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAGAATTCTGGCTGGAGAAACTTGA

Protein sequence

MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYERILAGET
Homology
BLAST of IVF0020080 vs. ExPASy TrEMBL
Match: A0A5D3CK25 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002120 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.0e-38
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60
          MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYERILAGET 87
          KKFRNQLLIQRLQSIENYERILAGET
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

BLAST of IVF0020080 vs. ExPASy TrEMBL
Match: A0A0A0K6D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.0e-30
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0

Query: 1   MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60
           MKK+SELP VS AAGGINKLQPPP PSSPLR CGGERRKLER  TVTVTEDV+ESAEAFI
Sbjct: 19  MKKNSELPAVS-AAGGINKLQPPPCPSSPLRFCGGERRKLER--TVTVTEDVNESAEAFI 78

Query: 61  KKFRNQLLIQRLQSIENYERILAGET 87
           +KFRNQLLIQRLQSIENYE+ILAGET
Sbjct: 79  QKFRNQLLIQRLQSIENYEKILAGET 101

BLAST of IVF0020080 vs. ExPASy TrEMBL
Match: A0A5N5G7Z8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019430 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-07
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 0

Query: 38 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYERILAG 85
          +KLER      TED++ESAEAFIKKFR QLLIQRL+SIENYE++LAG
Sbjct: 51 KKLER----KSTEDINESAEAFIKKFRKQLLIQRLESIENYEQMLAG 93

BLAST of IVF0020080 vs. ExPASy TrEMBL
Match: A0A218X0F1 (pathogen-associated molecular patterns-induced protein A70 OS=Punica granatum OX=22663 GN=LOC116201215 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.3e-07
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 21 QPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYER 80
          Q PP+P+S        ++KLER       ED+D SAEAFIKKFR QLL+QRL+SIENYE+
Sbjct: 22 QAPPAPTS-----SAAQKKLER----KPAEDIDASAEAFIKKFRQQLLLQRLESIENYEK 75

Query: 81 ILA 84
          +LA
Sbjct: 82 MLA 75

BLAST of IVF0020080 vs. ExPASy TrEMBL
Match: A0A1S3ECD8 (Uncharacterized protein OS=Cicer arietinum OX=3827 GN=LOC101507324 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-06
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 0

Query: 4   SSELPTVSAAAGGINKLQPPPSPSSP------LRGCGGERRKLERTVTVTVTEDVDESAE 63
           SS   + S+++   +   PPPS SSP      ++    + +KLER      +ED++ SA+
Sbjct: 31  SSSSSSSSSSSSSSSSSPPPPSSSSPSSSHEVVKKETNQLKKLER----MPSEDINASAD 90

Query: 64  AFIKKFRNQLLIQRLQSIENYERILA 84
           AFIK FR QLL+QRLQSIENYE++LA
Sbjct: 91  AFIKNFRQQLLLQRLQSIENYEKMLA 112

BLAST of IVF0020080 vs. NCBI nr
Match: KAA0058765.1 (DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (425), Expect = 2.41e-52
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60
          MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 KKFRNQLLIQRLQSIENYERILAGET 86
          KKFRNQLLIQRLQSIENYERILAGET
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

BLAST of IVF0020080 vs. NCBI nr
Match: KGN45285.1 (hypothetical protein Csa_016012 [Cucumis sativus])

HSP 1 Score: 140 bits (353), Expect = 3.65e-41
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0

Query: 1   MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60
           MKK+SELP VSAA GGINKLQPPP PSSPLR CGGERRKLERTVTVT  EDV+ESAEAFI
Sbjct: 19  MKKNSELPAVSAA-GGINKLQPPPCPSSPLRFCGGERRKLERTVTVT--EDVNESAEAFI 78

Query: 61  KKFRNQLLIQRLQSIENYERILAGET 86
           +KFRNQLLIQRLQSIENYE+ILAGET
Sbjct: 79  QKFRNQLLIQRLQSIENYEKILAGET 101

BLAST of IVF0020080 vs. NCBI nr
Match: KAG6575588.1 (hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014129.1 hypothetical protein SDJN02_24302, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.8 bits (242), Expect = 1.78e-24
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0

Query: 1  MKKSSELP--TVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERT--VTVTVTEDVDESA 60
          MK +S+ P    +AAAG   + QPPP P         ER K+E+T  VTV+VTEDV+ESA
Sbjct: 1  MKNTSQPPFSAAAAAAGSCKQQQPPPPPRQ-------ERTKMEKTPTVTVSVTEDVNESA 60

Query: 61 EAFIKKFRNQLLIQRLQSIENYERILAGET 86
          EAFIK+FRNQLLIQRLQSIENYE+ILAGET
Sbjct: 61 EAFIKRFRNQLLIQRLQSIENYEKILAGET 83

BLAST of IVF0020080 vs. NCBI nr
Match: KAB2611398.1 (hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 65.5 bits (158), Expect = 1.43e-11
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 0

Query: 38 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYERILAG 84
          +KLER  T    ED++ESAEAFIKKFR QLLIQRL+SIENYE++LAG
Sbjct: 51 KKLERKST----EDINESAEAFIKKFRKQLLIQRLESIENYEQMLAG 93

BLAST of IVF0020080 vs. NCBI nr
Match: XP_031388216.1 (pathogen-associated molecular patterns-induced protein A70 [Punica granatum] >OWM78256.1 hypothetical protein CDL15_Pgr015075 [Punica granatum] >PKI40871.1 hypothetical protein CRG98_038712 [Punica granatum])

HSP 1 Score: 64.3 bits (155), Expect = 2.66e-11
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 21 QPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIENYER 80
          Q PP+P+S        ++KLER       ED+D SAEAFIKKFR QLL+QRL+SIENYE+
Sbjct: 22 QAPPAPTS-----SAAQKKLERKPA----EDIDASAEAFIKKFRQQLLLQRLESIENYEK 75

Query: 81 ILA 83
          +LA
Sbjct: 82 MLA 75

BLAST of IVF0020080 vs. TAIR 10
Match: AT1G15385.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 38 RKLERTVTVTVTEDVDESAEAFIKKFRNQLLIQRLQSIEN 78
          +K+ER  ++    DVD+SAEAFI KFRNQLL+QRL+SIEN
Sbjct: 32 KKVERKASM----DVDKSAEAFITKFRNQLLLQRLESIEN 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CK254.0e-38100.00DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A0A0K6D19.0e-3088.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1[more]
A0A5N5G7Z82.8e-0772.34Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A218X0F16.3e-0757.14pathogen-associated molecular patterns-induced protein A70 OS=Punica granatum OX... [more]
A0A1S3ECD81.4e-0645.35Uncharacterized protein OS=Cicer arietinum OX=3827 GN=LOC101507324 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0058765.12.41e-52100.00DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 d... [more]
KGN45285.13.65e-4188.37hypothetical protein Csa_016012 [Cucumis sativus][more]
KAG6575588.11.78e-2463.33hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAB2611398.11.43e-1172.34hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis][more]
XP_031388216.12.66e-1157.14pathogen-associated molecular patterns-induced protein A70 [Punica granatum] >OW... [more]
Match NameE-valueIdentityDescription
AT1G15385.11.1e-0665.00unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761,... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 50..83
e-value: 2.3E-14
score: 52.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR33098:SF82DUF761 DOMAIN PROTEINcoord: 2..85
NoneNo IPR availablePANTHERPTHR33098COTTON FIBER (DUF761)coord: 2..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0020080.2IVF0020080.2mRNA