IVF0020032 (gene) Melon (IVF77) v1

Overview


Name	IVF0020032
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	40S ribosomal protein S18
Location	chr01: 7609877 .. 7615048 (-)
RNA-Seq Expression	IVF0020032
Synteny	IVF0020032

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCGGAATACGAAAACGTGCGGATGGCGGCTGTGTTCGTCGGGTGAAGAAGCTGAAGAGAAGAAGAAGAAGAAGAAGAACGAGCGTTGTCGGGTGAAGGTGGAGACGTCGGGCGGCTGTCGGGCGAGGAAGGGAGAAGAAGAAGAAGAAGAAAATTCACGAGGGGGGGCGCGCGCGCGGTAAGTTAGGTTTATTTTAAAAAAATATAAAGTATATATATATATATAGAATAATAATAATAATAATAATAATAATATAATTTAATTAATAATAATAATATAATAATATAATATAAATAATAATACTTATATTAATATTAAATAATAATAATATATTAAATGATAATAATAATAATATAATTAATATTATATTATTATTATATCATTTTACAAAATATTAAATTTAAAGAAATTTCATATCCTTAAATTTCTTTTTCTTCCCTTTTCGAAACCACCAAGAATTTACACCAAAATTTTAAATTTTCGAAAATTCACACGAATGATAAAAATTTACCTCGAAAAAATTCGGGGCATTACAGATCAATGAACTTCAGGTTCATTGTTGCGTATATATCAAACACACGAATGTGTGTGTAATATAATTGAGAAGTAAAAGTAGACAAATAATTTTCTATATATCACTACTCGCAGAAGATTATATAATATGCATATATCATATATTATTCTTAGAATCAATCTCTCTAGATATGATATCGACTACAACATATACATTTCCAATTTAACTTCTCTTTAATAATTTACAAAGATAGTAAAGTATATCAAAACTATTAAATCTTGAAGATGTATTGTTTAGTTTTAAGTATAATATGCATAGATATACTATATGCAGCAGATAAATATCAATTATTCTTATTCTCTCCAAGAGATTAAAGGAACCCAAATATTTCATCTATATATATAAATGGGTAAAGGATATCATCTCTTCAGAAGATTATAAGTAATTTGTGATAACCAATAATATCATATTTATAAGGTTAAAATAAAAGTATGATCTTTTCGAGAGATACAGATATTTCTCAAAGTTTGCTTTCATACATTGTTCTCCTTTTCATCGTTAAGGATTTTAATTTTTCAAATAGACTCTTAATGTACGACAAATACACGATTATTGTATCTTTTTCAACCATATTTGGAAATAAAATTCTCATATGGTTCTAATCAAATAAACCCTTCTTCTCTATTAACATAATTTCGATCTTACTAAATATTGTAACATTCACTTCAGGGAATGCTACTAAATTATTTGGTCGAAATTTACCATTTTTTTTATAGGAATATATGCTCAATAGCTAATATAATGTTCAAATTTTCTCTCTCAAATTGTTAACTATTATACATAACTTTCATAAACTTTGTCATAAGAGAATTTAATCAAATATATATAATCACTACATATAAAATTTGTAAGATTCACAAATTCACATGATAATAATTTAAATATTCAACAATCAAATAAGTTTCAAAGACAACATTGAGAATTTATTCTCGTATTTGAAAAACAACATTAACATATATAATCTTAATGTGTATATATATAAGATAAATATTACCACAATATTTGTCAAGTAAAATGAAATCCAATTAGGAAAACAATATTCTAATTTAAACTTTTATATAATTAATTAGAAAAACATTTCAATCAAATATTTCGAATATAAGAATTATATTTAAAATAAGGCATGATTTACCACCTTAATCTAAATAACATTAGAATATTTATAACATACATCTAAAATGATATAGCATATTGACAAATCTATAAGATTTAACCAAAAATTAAAGTCAAGAAATACTTGATTATTCAATATCTTTTCTATTTTGGATCACTTTAAGTTTCTCAAACATAAATTTTATCCTCAACAAATATAAAAATTATCTATAGTCTAAAATAGTAACCACACACATATATACATATACTTCAAATAGAATTTAAGTTTTAATATATACTTATTCAACACATATGTCATGATATACATATCTCATGCACCAAAAATTTAACATCACAAAATTTTACCATGAATGTCATACATAACTTGAAACCAAATTAAGAATCATTTTTCATTAAATCTATGCAATTGCAAATTTTTTCTATTTAATAATTCTACCAAAGTACGAGGATAAGTACATGCAATTATTGTCGAACATATGAAAATATGAATAAAGTTTTTCGATTCGATCAAATCAATTATAAAACTAATAATAAATGTACCTTAGCAAACAATTTCACAATTAGCATATATTGCATACTTAGTTATCAAATGTTTACATTCATCTTCTTTCAACTTTATGTTTAAATTCAAGAAATATGAATGATGGTGATGAGAAGATCAATGATGAATATACCAAATACATACATATACGACAAAATCATCAAAATCAAAATACTCACCATATTTGGACGAAATTCTAAATACCTCAAAAATTATTGAGAAAATTCTAGCAAGTCTTTAACAAGACCAGAATCAATTTCTACAAAGCTTTCAAAGTAGTAGAGACTCGTGCTGATAACGTGTTATGAAATAAATAACCAAAAACTAAATAAGAACAATGCAAGAACACAAAAGAAGAATAGAGAAGAGAGGGAGAAGAGAAGACAATTGAACTCAATTTCAATTGTGGTGTGTCTACAAATGACCTGTACGACCTCTATTTATAGGGTTGTGATAAAAATGGTTACAAAACCAAACATAAACAGGGATAAGAAAGTTGTGAAAATTGATGGAAAGATTATTGAATGAATTGTAATTTAAAGAGGTTATGGACATCTAGCAATGTGTTAATTTGACTTTTAACATATAAACTCTTTTTTTTATTATTATTCCTAAAATTCCACGAAAGGAAGAGATAGAACGAAAGTATGAAGAGGGTATATTGGTCAATTTAGTTTAGTCAGAAACCCTAGAATCTGATTGACAATATATAAAATCCTTCTCCACTCACCACTCAAAGATCTCCTCTGGTTCTTTCCTGCAGTTGCGCCGCCGGGAATTCTTCCAACCCCTTGCCTCTATCTTCATTCGCCATGGTAAGTAACTGCACTTTCTTCTTTCTCATTTTTCCCTCATTGTTCTTCTACTTTTGTTAGGGTTTATATTCTTCTTCGAATAATCGTTTTTTTTTTTGTTGATCTGGTCTTTTTATTTTCCATCTAGTCACTGGTAGCAAACGAGGATTTTCAGCACATTCTGCGTGTGCTCAACACTAACGTCGATGGGAAGCAGAAGATTATGTTTGCTCTCACATCATTAAAGGTATTGGAAGACGTTTTGCTAACATCGTTTGCAAGAAGGCTGATGTCGACATGAACAAGAGGTACTTTACGTTTCCTTTTTCTTATTTCTCCTCTTTTCCGCTTGTCTCATATCTAGTTTGATAGAAAAATTTGACGTTTATGAGTATTAAAAGGGTTCATCCGTTGTTTTTAATTCTGCTACTACGGATTTAAGGTATCAGTTCCTAATTATGTGCTAAGAAATTTAGGTTTAAGTCTTACATTAAAAAACTCTAGATGTGAGATATTTGGGAATTGGCATAATGTAGGAGTTTTGACTTGGGGGTACTGCTTATGGTTGAATGCTTGAAAGCTTTAGAATATTTGAAGGAGCTCATTGGTGTTACAGTAATAACACTGTAGTAACTGGTATGGCATTTTTCTGCATGATCAGCTCAATCACTGTAGAACATATTTATGCAGCATTCTGTAACGTTCTCGTTGGGTTAATATCATTGTGAGATTTAGACTTTTCTACAAGTTGGTTCTTGTCTGCAGCTGGAATATGAAAGTACGTAGGCCATAGTCGGGAAGAACAAGAAAAAAAATACTATGAAAGCAGCAGGTGGAGTACAGGACCTTCAATCTTGAGTCTTCACATAGCCAGGACAAGGATGTCAAAATATTTAATGACTTTTTTTTGAAAACTGGGCCTAGTTGATGAAAAAGAGACTACAATCCTGATTTGACTTATAAGAGGAAGAAAACGGAACAGAAATATGAACTGCTCCTAGATTTCGGCTGCTGGAGTTATCTGCTGCCGATTCTTTCTTTCTTCTTTGATATAATTTCACAACATATTCCTGGTGCCTACCTGGGTCTGATGAGAGTGATGCATGAGAATAAAGCTAGTTCCTCTAGTTCACTGAAGGAAATGAGGCTAAATCTTAGTTATGACTTGATGGAAATTGCAAATAATCAGGAATTCCTTAGTCCATGACTTAATTCAAACTCAACTGTTCCCCTTCAACGTCGACTTTTACAGGCATCTGAAACTCCTATTTGTTAAAATCCTGTTTTTATGATGGCCTCTTTCAAATCCTCTAGAAATTTGTTTGAATTTGAACCATGTATTTTTAAGAATCCTTCACAAAGACTGAAGAAATTAGATTTGTAGCTTACCTTGGGATTTTCTTTAGTACAAGAGACACTGTTGCAATTATATTGTTGGAATTTATAATATACTAATATCTCTAGAGAGACTGGGGTAAGAGCAATTGATTCACATTTGTTGCTTGGTGCTGTAGTTTATTTAGGAAGTTCATGGTTTTGGGGTATGGTTTTTTTGCACATCTAGTATTTATCTTTCTTTTGTTATATGTTTAATGACCTTGACCAAATTTGGTTTTAATTTATTGACCATTTTATTACCAGCCTAAAGGATGTTACGATTCAGTGTTCAGAGAAAAACTCAACTGTTTGACTAATATACATCTTTGTTTTCATTTGTTATTTTGCAAACGGGCTGGTGAACTAACTGCTGCCGAGTTGGATAATCTCATGGTGGTTGTTGCCAATCCACGACAATTAAAATCCCGACTGGTTTTGAATAGGCAGAAAGACTACAAGGATGGAAAATATTCTCAAGTAGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAGCGGTTGAAGAAGATTAGGTAATATAATTGAAGTGTTTCTTCCAATGGCTGATATATTTTGTTTCTTGGATATTGAGTCTCACTCCTTGCATATGTGAATTCATGGTTCACAATGATAAATCTTCGACATGATGAATGCAGGAACCACCGAGGTCTAAGGCACTACTGGGGCCTCAGAGTCCGTGGTCAGCACACTAAGACCACTGGTCGACGAGGGAAAACTGTCGGTGTCTCCAAGAAGCGTTGA

mRNA sequence

ATGGGGCGGAATACGAAAACGTGCGGATGGCGGCTGTGTTCGTCGGGTGAAGAAGCTGAAGAGAAGAAGAAGAAGAAGAAGAACGAGCGTTGTCGGGTGAAGGTGGAGACGTCGGGCGGCTGTCGGGCGAGGAAGGGAGAAGAAGAAGAAGAAGAAAATTCACGAGGGGGGGCGCGCGCGCGTTGCGCCGCCGGGAATTCTTCCAACCCCTTGCCTCTATCTTCATTCGCCATGTCACTGGTAGCAAACGAGGATTTTCAGCACATTCTGCGTGTGCTCAACACTAACGTCGATGGGAAGCAGAAGATTATACGTTTTGCTAACATCGTTTGCAAGAAGGCTGATGTCGACATGAACAAGAGAGAAAAACTCAACTGTTTGACTAATATACATCTTTGTTTTCATTTGTTATTTTGCAAACGGGCTGGTGAACTAACTGCTGCCGAGTTGGATAATCTCATGGTGGTTGTTGCCAATCCACGACAATTAAAATCCCGACTGGTTTTGAATAGGCAGAAAGACTACAAGGATGGAAAATATTCTCAAGTAGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAGCGGTTGAAGAAGATTAGGAACCACCGAGGTCTAAGGCACTACTGGGGCCTCAGAGTCCGTGGTCAGCACACTAAGACCACTGGTCGACGAGGGAAAACTGTCGGTGTCTCCAAGAAGCGTTGA

Coding sequence (CDS)

ATGGGGCGGAATACGAAAACGTGCGGATGGCGGCTGTGTTCGTCGGGTGAAGAAGCTGAAGAGAAGAAGAAGAAGAAGAAGAACGAGCGTTGTCGGGTGAAGGTGGAGACGTCGGGCGGCTGTCGGGCGAGGAAGGGAGAAGAAGAAGAAGAAGAAAATTCACGAGGGGGGGCGCGCGCGCGTTGCGCCGCCGGGAATTCTTCCAACCCCTTGCCTCTATCTTCATTCGCCATGTCACTGGTAGCAAACGAGGATTTTCAGCACATTCTGCGTGTGCTCAACACTAACGTCGATGGGAAGCAGAAGATTATACGTTTTGCTAACATCGTTTGCAAGAAGGCTGATGTCGACATGAACAAGAGAGAAAAACTCAACTGTTTGACTAATATACATCTTTGTTTTCATTTGTTATTTTGCAAACGGGCTGGTGAACTAACTGCTGCCGAGTTGGATAATCTCATGGTGGTTGTTGCCAATCCACGACAATTAAAATCCCGACTGGTTTTGAATAGGCAGAAAGACTACAAGGATGGAAAATATTCTCAAGTAGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAGCGGTTGAAGAAGATTAGGAACCACCGAGGTCTAAGGCACTACTGGGGCCTCAGAGTCCGTGGTCAGCACACTAAGACCACTGGTCGACGAGGGAAAACTGTCGGTGTCTCCAAGAAGCGTTGA

Protein sequence

MGRNTKTCGWRLCSSGEEAEEKKKKKKNERCRVKVETSGGCRARKGEEEEEENSRGGARARCAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKIIRFANIVCKKADVDMNKREKLNCLTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLKSRLVLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR

Homology

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BLAST of IVF0020032 vs. ExPASy Swiss-Prot
Match: P34788 (40S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-59
Identity = 128/172 (74.42%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANE+FQHILRVLNTNVDGKQKI+           R ANIVCKKADVDMN       
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMN------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGEL+AAE+DNLM +VANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  -------------KRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

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BLAST of IVF0020032 vs. ExPASy Swiss-Prot
Match: Q8IT98 (40S ribosomal protein S18 OS=Argopecten irradians OX=31199 GN=RPS18 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.7e-47
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           M+L+  E FQHILRV+NTN+DGK+KI+           R+AN+VCKKADVD+        
Sbjct: 1   MALIIPEKFQHILRVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDIT------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGEL+  E++ ++ +++NPRQ K     LNRQKD KDGKYSQV+S
Sbjct: 61  -------------KRAGELSEDEIERVITIMSNPRQYKIPNWFLNRQKDVKDGKYSQVMS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           NALD KLR+DLERLKKIR HRGLRHYWGLRVRGQHTKTTGRRG+TVGV+KK+
Sbjct: 121 NALDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVAKKK 152

[Close]

BLAST of IVF0020032 vs. ExPASy Swiss-Prot
Match: Q8ISP0 (40S ribosomal protein S18 OS=Branchiostoma belcheri OX=7741 GN=RPS18 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.2e-46
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLV  E FQHILRV+NTN+DG++KI+           R++NIVCKKAD+D++       
Sbjct: 1   MSLVIPEKFQHILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLS------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGEL+  E++ L+ ++ NPRQ K     LNRQKD KDGKYSQV++
Sbjct: 61  -------------KRAGELSDEEVERLITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVMA 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           N+LD KLR+DLERLKKIR HRGLRHYWGLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 121 NSLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152

[Close]

BLAST of IVF0020032 vs. ExPASy Swiss-Prot
Match: Q8JGS9 (40S ribosomal protein S18 OS=Danio rerio OX=7955 GN=rps18 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-44
Identity = 100/172 (58.14%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLV  E FQHILRVLNTN+DG++KI            R+A++V +KAD+D+N       
Sbjct: 1   MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLN------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGELT  E++ ++ ++ NPRQ K     LNRQKD KDGKYSQV++
Sbjct: 61  -------------KRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLA 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           N LD KLR+DLERLKKIR HRGLRH+WGLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 121 NGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152

[Close]

BLAST of IVF0020032 vs. ExPASy Swiss-Prot
Match: Q90YQ5 (40S ribosomal protein S18 OS=Ictalurus punctatus OX=7998 GN=rps18 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.5e-44
Identity = 99/172 (57.56%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLV  E FQHILRVLNTN+DG++KI            R+A++V +KAD+D++       
Sbjct: 1   MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLS------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGELT  E++ ++ ++ NPRQ K     LNRQKD KDGKYSQV++
Sbjct: 61  -------------KRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLA 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           N LD KLR+DLERLKKIR HRGLRH+WGLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 121 NGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152

[Close]

BLAST of IVF0020032 vs. ExPASy TrEMBL
Match: A0A5A7UWI6 (40S ribosomal protein S18 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00290 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.6e-68
Identity = 150/188 (79.79%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 62  CAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIV 121
           CAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKI+           RFANIV
Sbjct: 7   CAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIV 66

Query: 122 CKKADVDMNKREKLNCLTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVL 181
           CKKADVDMN                    KRAGELTAAELDNLMVVVANPRQ K     L
Sbjct: 67  CKKADVDMN--------------------KRAGELTAAELDNLMVVVANPRQFKIPDWFL 126

Query: 182 NRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGK 238
           NRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGK
Sbjct: 127 NRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGK 174

[Close]

BLAST of IVF0020032 vs. ExPASy TrEMBL
Match: A0A5D3BZG0 (40S ribosomal protein S18 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001270 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 142/199 (71.36%), Postives = 146/199 (73.37%), Query Frame = 0


Query: 51  EENSRGGARARCAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKII------ 110
           E NSR    A+     + +  PL S  MSLVANEDFQHILRVLNTNVDGKQKI+      
Sbjct: 2   EGNSRNSLLAKEKKHQNEDAQPLLS-TMSLVANEDFQHILRVLNTNVDGKQKIMFALTSI 61

Query: 111 -----RFANIVCKKADVDMNKREKLNCLTNIHLCFHLLFCKRAGELTAAELDNLMVVVAN 170
                RFANIVCKKADVDMN                    KRAGELTAAELDNLMVVVAN
Sbjct: 62  KGIGRRFANIVCKKADVDMN--------------------KRAGELTAAELDNLMVVVAN 121

Query: 171 PRQLK-SRLVLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 230
           PRQ K     LNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG
Sbjct: 122 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 179

Query: 231 QHTKTTGRRGKTVGVSKKR 238
           QHTKTTGRRGKTVGVSKKR
Sbjct: 182 QHTKTTGRRGKTVGVSKKR 179

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BLAST of IVF0020032 vs. ExPASy TrEMBL
Match: A0A0A0K7Z7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055370 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.0e-59
Identity = 134/172 (77.91%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANEDFQHILRVLNTNVDGKQKI+           RFANIVCKKADVDMN       
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMN------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGELTAAELDNLMVVVANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  -------------KRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

[Close]

BLAST of IVF0020032 vs. ExPASy TrEMBL
Match: A0A1S3CH47 (40S ribosomal protein S18 OS=Cucumis melo OX=3656 GN=LOC103500403 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.0e-59
Identity = 134/172 (77.91%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANEDFQHILRVLNTNVDGKQKI+           RFANIVCKKADVDMN       
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMN------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGELTAAELDNLMVVVANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  -------------KRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

[Close]

BLAST of IVF0020032 vs. ExPASy TrEMBL
Match: B9SEC1 (40S ribosomal protein S18, putative OS=Ricinus communis OX=3988 GN=RCOM_0961900 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 3.9e-59
Identity = 133/172 (77.33%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANEDFQHILRVLNTNVDGKQKI+           RFANIVCKKADVDMN       
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMN------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGELTAAELDNLMV+VANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  -------------KRAGELTAAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

[Close]

BLAST of IVF0020032 vs. NCBI nr
Match: KAA0059528.1 (40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK14112.1 40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (686), Expect = 2.82e-88
Identity = 150/188 (79.79%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 62  CAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIV 121
           CAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKI+           RFANIV
Sbjct: 7   CAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIV 66

Query: 122 CKKADVDMNKREKLNCLTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVL 181
           CKKADVDMNKR                    AGELTAAELDNLMVVVANPRQ K     L
Sbjct: 67  CKKADVDMNKR--------------------AGELTAAELDNLMVVVANPRQFKIPDWFL 126

Query: 182 NRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGK 237
           NRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGK
Sbjct: 127 NRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGK 174

[Close]

BLAST of IVF0020032 vs. NCBI nr
Match: KAA0046827.1 (40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK04510.1 40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (611), Expect = 8.39e-77
Identity = 142/199 (71.36%), Postives = 146/199 (73.37%), Query Frame = 0


Query: 51  EENSRGGARARCAAGNSSNPLPLSSFAMSLVANEDFQHILRVLNTNVDGKQKII------ 110
           E NSR    A+     + +  PL S  MSLVANEDFQHILRVLNTNVDGKQKI+      
Sbjct: 2   EGNSRNSLLAKEKKHQNEDAQPLLS-TMSLVANEDFQHILRVLNTNVDGKQKIMFALTSI 61

Query: 111 -----RFANIVCKKADVDMNKREKLNCLTNIHLCFHLLFCKRAGELTAAELDNLMVVVAN 170
                RFANIVCKKADVDMNKR                    AGELTAAELDNLMVVVAN
Sbjct: 62  KGIGRRFANIVCKKADVDMNKR--------------------AGELTAAELDNLMVVVAN 121

Query: 171 PRQLK-SRLVLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 230
           PRQ K     LNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG
Sbjct: 122 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 179

Query: 231 QHTKTTGRRGKTVGVSKKR 237
           QHTKTTGRRGKTVGVSKKR
Sbjct: 182 QHTKTTGRRGKTVGVSKKR 179

[Close]

BLAST of IVF0020032 vs. NCBI nr
Match: XP_004139687.1 (40S ribosomal protein S18 [Cucumis sativus] >XP_004140957.2 40S ribosomal protein S18 [Cucumis sativus] >XP_008456747.1 PREDICTED: 40S ribosomal protein S18 [Cucumis melo] >XP_008461916.1 PREDICTED: 40S ribosomal protein S18 [Cucumis melo] >XP_038884290.1 40S ribosomal protein S18 [Benincasa hispida] >XP_038896640.1 40S ribosomal protein S18 [Benincasa hispida] >KGN44457.1 hypothetical protein Csa_016630 [Cucumis sativus])

HSP 1 Score: 238 bits (607), Expect = 1.38e-76
Identity = 134/172 (77.91%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANEDFQHILRVLNTNVDGKQKI+           RFANIVCKKADVDMNKR     
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKR----- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                          AGELTAAELDNLMVVVANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  ---------------AGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 237
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

[Close]

BLAST of IVF0020032 vs. NCBI nr
Match: XP_021902783.1 (40S ribosomal protein S18 isoform X1 [Carica papaya])

HSP 1 Score: 238 bits (606), Expect = 1.95e-76
Identity = 133/172 (77.33%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANEDFQHILRVLNTNVDGKQKI+           RFANIVCKKADVDMNKR     
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGVGRRFANIVCKKADVDMNKR----- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                          AGELTAAELDNLMV+VANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  ---------------AGELTAAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 237
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

[Close]

BLAST of IVF0020032 vs. NCBI nr
Match: XP_002524340.1 (40S ribosomal protein S18 [Ricinus communis] >XP_021602211.1 40S ribosomal protein S18 [Manihot esculenta] >XP_021689482.1 40S ribosomal protein S18 [Hevea brasiliensis] >XP_031251561.1 40S ribosomal protein S18-like [Pistacia vera] >XP_031258282.1 40S ribosomal protein S18-like [Pistacia vera] >EEF38080.1 40S ribosomal protein S18, putative [Ricinus communis] >OAY58510.1 hypothetical protein MANES_02G183300v8 [Manihot esculenta])

HSP 1 Score: 238 bits (606), Expect = 1.95e-76
Identity = 133/172 (77.33%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANEDFQHILRVLNTNVDGKQKI+           RFANIVCKKADVDMNKR     
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKR----- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                          AGELTAAELDNLMV+VANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  ---------------AGELTAAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 237
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

[Close]

BLAST of IVF0020032 vs. TAIR 10
Match: AT1G22780.1 (Ribosomal protein S13/S18 family )

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-60
Identity = 128/172 (74.42%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANE+FQHILRVLNTNVDGKQKI+           R ANIVCKKADVDMN       
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMN------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGEL+AAE+DNLM +VANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  -------------KRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

[Close]

BLAST of IVF0020032 vs. TAIR 10
Match: AT1G34030.1 (Ribosomal protein S13/S18 family )

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-60
Identity = 128/172 (74.42%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANE+FQHILRVLNTNVDGKQKI+           R ANIVCKKADVDMN       
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMN------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGEL+AAE+DNLM +VANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  -------------KRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

[Close]

BLAST of IVF0020032 vs. TAIR 10
Match: AT4G09800.1 (S18 ribosomal protein )

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-60
Identity = 128/172 (74.42%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 78  MSLVANEDFQHILRVLNTNVDGKQKII-----------RFANIVCKKADVDMNKREKLNC 137
           MSLVANE+FQHILRVLNTNVDGKQKI+           R ANIVCKKADVDMN       
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMN------- 60

Query: 138 LTNIHLCFHLLFCKRAGELTAAELDNLMVVVANPRQLK-SRLVLNRQKDYKDGKYSQVVS 197
                        KRAGEL+AAE+DNLM +VANPRQ K     LNRQKDYKDGKYSQVVS
Sbjct: 61  -------------KRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVS 120

Query: 198 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 238
           NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Sbjct: 121 NALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152

The following BLAST results are available for this feature:

BLAST of IVF0020032 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34788	2.2e-59	74.42	40S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1	[more]
Q8IT98	5.7e-47	59.30	40S ribosomal protein S18 OS=Argopecten irradians OX=31199 GN=RPS18 PE=2 SV=1	[more]
Q8ISP0	2.2e-46	59.30	40S ribosomal protein S18 OS=Branchiostoma belcheri OX=7741 GN=RPS18 PE=2 SV=1	[more]
Q8JGS9	1.2e-44	58.14	40S ribosomal protein S18 OS=Danio rerio OX=7955 GN=rps18 PE=2 SV=1	[more]
Q90YQ5	4.5e-44	57.56	40S ribosomal protein S18 OS=Ictalurus punctatus OX=7998 GN=rps18 PE=2 SV=1	[more]

BLAST of IVF0020032 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWI6	1.6e-68	79.79	40S ribosomal protein S18 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3BZG0	1.4e-59	71.36	40S ribosomal protein S18 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0K7Z7	3.0e-59	77.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055370 PE=3 SV=1	[more]
A0A1S3CH47	3.0e-59	77.91	40S ribosomal protein S18 OS=Cucumis melo OX=3656 GN=LOC103500403 PE=3 SV=1	[more]
B9SEC1	3.9e-59	77.33	40S ribosomal protein S18, putative OS=Ricinus communis OX=3988 GN=RCOM_0961900 ...	[more]

BLAST of IVF0020032 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059528.1	2.82e-88	79.79	40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK14112.1 40S ...	[more]
KAA0046827.1	8.39e-77	71.36	40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK04510.1 40S ...	[more]
XP_004139687.1	1.38e-76	77.91	40S ribosomal protein S18 [Cucumis sativus] >XP_004140957.2 40S ribosomal protei...	[more]
XP_021902783.1	1.95e-76	77.33	40S ribosomal protein S18 isoform X1 [Carica papaya]	[more]
XP_002524340.1	1.95e-76	77.33	40S ribosomal protein S18 [Ricinus communis] >XP_021602211.1 40S ribosomal prote...	[more]

BLAST of IVF0020032 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22780.1	1.6e-60	74.42	Ribosomal protein S13/S18 family	[more]
AT1G34030.1	1.6e-60	74.42	Ribosomal protein S13/S18 family	[more]
AT4G09800.1	1.6e-60	74.42	S18 ribosomal protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001892	Ribosomal protein S13	PFAM	PF00416	Ribosomal_S13	coord: 140..227 e-value: 7.7E-34 score: 116.8
IPR001892	Ribosomal protein S13	PROSITE	PS50159	RIBOSOMAL_S13_2	coord: 105..230 score: 21.87607
None	No IPR available	GENE3D	1.10.8.50		coord: 78..126 e-value: 4.9E-9 score: 38.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..65
None	No IPR available	PANTHER	PTHR10871	30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18	coord: 76..237
None	No IPR available	PANTHER	PTHR10871:SF3	40S RIBOSOMAL PROTEIN S18-RELATED	coord: 76..237
IPR027437	30s ribosomal protein S13, C-terminal	GENE3D	4.10.910.10	30s ribosomal protein s13, domain 2	coord: 177..227 e-value: 3.3E-28 score: 99.2
IPR018269	Ribosomal protein S13, conserved site	PROSITE	PS00646	RIBOSOMAL_S13_1	coord: 206..219
IPR010979	Ribosomal protein S13-like, H2TH	SUPERFAMILY	46946	S13-like H2TH domain	coord: 132..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020032.1	IVF0020032.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003676	nucleic acid binding