IVF0020012 (gene) Melon (IVF77) v1

Overview


Name	IVF0020012
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	F-box protein SKIP8
Location	chr07: 19607139 .. 19609950 (-)
RNA-Seq Expression	IVF0020012
Synteny	IVF0020012

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTACGATACCATTTCACGGGTCACCCAAAACCTCCACCTCCTTCTTCCGCCCTTCCGATACCGAAGAAATTCCGGCTCCGTCACCAGAGATCATTTCCCCCACAGTCATATCCGTCTCCGCCCAACGCATTTCATCTTCCTAACTCCACAGTTGACCATATTTTCCATACTTCACCTTCTCTCGGCGACGGCGCGTTTACACACCTTCCGCTGAAACCCGACGCCACAAATTTTCTTAGGGTTTCATGTTTTGTATGGTTGAACGTCATACAACGCTTTCATGTCGTTTGAATGGAGATTGTTTCTTCTGCCACCATTGCCTTGTCGTCCCAACCCTTTCCTATAGCTGCGATTGTTACTTTTCTTTGTTTTCTTCTTGCTATTTTCGTCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAATCTCTACAATCGGAGAGCGTGGGTACGAGGAATTGTAATTGTACTTGTTCGCTTAACGGTGGTGTGGTTATTAGGGGTTTGGACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTATTGGAGAAGGCGCCGGTAGTTGTTACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTAGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTATGCCGTTTGTCCATGACTAATTCTTTGATGCGCAAAGCCGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGTACGAGTTAGGTTTAATCTTCTTTGTACGGTTTTTCGTTTTCTAATTTATCTTTCTTCTTGAATATGAGTGCCGGGAAAGAAACACGAAAGGGAATATAGAATCTCTGTTCTTGGGAATATTGTTATGAAATTTTGCTACCATTATCTCGTCTACATTTACTCAACGTCTTTTTGTAGTTCTTCAAGGGAACGAATTGATTGTATTAACTTTTATATTTCAAGTAGTGGGATCGTTTCAATTGATGGGTTGTGGTCAAAAATTGCAAGAACTATCTCTATGCTTTCCTTGTTGTATTGTTCTTGATGTTTAAATCTATTTAGGATTCTCTGGGGCTAAAACAACCTTTCCATGAAATCTTTTAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAATGGGTGGAAGTCTTATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCGTTTTTGGTTGAATGCAGATTATGTGAAGTGCATTCATGCTTCAGGAGAATTCTTTTCAGGGTATTTACCTTCTTGTCTTATTTTTAGCATGATATCAGATTGCTGCTTCTTATGGCTAACTAAATTAGCAAACATGGCCAACATTTTCTTCTTCAGACTTGTGATTCTGTGAAGTTGCATATATTGCCCTCTTTTCTTTTTGTCTTCTTATGTGATCTTTACATTTTCTAAGCATTTTTACTGAGAAGGTGATATACAAGGGATAGTTAGAAATGACTCTAGGCTTATGGTTAGTGTCATATGCGTGTTTTGATTACCTGAATTTCTTGAATTTAAGTTGTTCTTTATATAAGAACATTTGTCGAGAATTACTTATTTACTATGTTGGACCGACAATAGACCTTGACCTTGTCTCTCTACTCTTTAGTATCACTTGAATGTAGTTCTAATGTTTCTTGAAGGGAAGAATTTTGACCATGCATATGGGCATGGATAACTAGATTCTGTGATTAGTGAGATACTGAAGAATGCTTCTTGTAATCCGCTCCTGCCATATCGAGTTCAATTTGAATTCGTATTAATCTTATGATATGTGATTATAAATGAAGTTGTTCAAGCATGTTGAGCTTGATCACTTTTTCCTCTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGTTGCAAATAACCTTTTGCGATCAACACTTTAGTTCTTGGTTGAACTATATTGAAGGGATTGAATGTTGAGCTTGTCAAGTTGCTAATATCTAGATGTTTAGACTATTTATGCATGTTATGTCATCCAACAACTCTTTGAATTCCTGTTATATGTTCAGTAAAGGCTTTCAAAGAAATTCACATAATCCGGTACTTACTATGTTTGGGATTTCTTTCTACAGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGACGTACGGGCTCGTGTGCTTACCGATATGGCTTGGGTTAGCATGAAAACCTATGTTGACATGGATACGGGGCCATTCAACGTAACCAACATTTACGAGTTTCATGATGGTCGATGGTACATGGTGCATCATCACAGCTCTGTAATGCTTATTGTTGGGGAGATGGAACAACAAATGGTTCATGGCTAACAGAGTGAAGATAGAAGAGAAAGTAAAGCATGGAAAAAATATACAATACTAGGTGGTACAAAGGTAGGGTGGTGTTTGGTAGAAGAAGCAAGATTTGAAGGAAAAAGAAAAAAAAAATTCTTGTCCATTACTTTTAATCAACACCATTTTAAACTGTTCCAACCTCAGTTTTTCTTGATCTGTGTTGATTGATCCCTTTTTTTTCTCTTTCAAAGCATTTTTTTTCTTCCATAGTTTGATTCCATGCTGAAGGCTGAAATGGCTATGCATGTGTTTCCAGCAATGAAGGAGTAGTCATTAACAAAGATTACCAAATATTTGTACTTCAATTTTCTGAAGTGTTGCTATTGAGATGCTCAATTAACTCCTCCA

mRNA sequence

GTTACGATACCATTTCACGGGTCACCCAAAACCTCCACCTCCTTCTTCCGCCCTTCCGATACCGAAGAAATTCCGGCTCCGTCACCAGAGATCATTTCCCCCACAGTCATATCCGTCTCCGCCCAACGCATTTCATCTTCCTAACTCCACAGTTGACCATATTTTCCATACTTCACCTTCTCTCGGCGACGGCGCGTTTACACACCTTCCGCTGAAACCCGACGCCACAAATTTTCTTAGGGTTTCATGTTTTGTATGGTTGAACGTCATACAACGCTTTCATGTCGTTTGAATGGAGATTGTTTCTTCTGCCACCATTGCCTTGTCGTCCCAACCCTTTCCTATAGCTGCGATTGTTACTTTTCTTTGTTTTCTTCTTGCTATTTTCGTCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAATCTCTACAATCGGAGAGCGTGGGTACGAGGAATTGTAATTGTACTTGTTCGCTTAACGGTGGTGTGGTTATTAGGGGTTTGGACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTATTGGAGAAGGCGCCGGTAGTTGTTACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTAGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTATGCCGTTTGTCCATGACTAATTCTTTGATGCGCAAAGCCGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAATGGGTGGAAGTCTTATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCGTTTTTGGTTGAATGCAGATTATGTGAAGTGCATTCATGCTTCAGGAGAATTCTTTTCAGGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGACGTACGGGCTCGTGTGCTTACCGATATGGCTTGGGTTAGCATGAAAACCTATGTTGACATGGATACGGGGCCATTCAACGTAACCAACATTTACGAGTTTCATGATGGTCGATGGTACATGGTGCATCATCACAGCTCTGTAATGCTTATTGTTGGGGAGATGGAACAACAAATGGTTCATGGCTAACAGAGTGAAGATAGAAGAGAAAGTAAAGCATGGAAAAAATATACAATACTAGGTGGTACAAAGGTAGGGTGGTGTTTGGTAGAAGAAGCAAGATTTGAAGGAAAAAGAAAAAAAAAATTCTTGTCCATTACTTTTAATCAACACCATTTTAAACTGTTCCAACCTCAGTTTTTCTTGATCTGTGTTGATTGATCCCTTTTTTTTCTCTTTCAAAGCATTTTTTTTCTTCCATAGTTTGATTCCATGCTGAAGGCTGAAATGGCTATGCATGTGTTTCCAGCAATGAAGGAGTAGTCATTAACAAAGATTACCAAATATTTGTACTTCAATTTTCTGAAGTGTTGCTATTGAGATGCTCAATTAACTCCTCCA

Coding sequence (CDS)

ATGGAGATTGTTTCTTCTGCCACCATTGCCTTGTCGTCCCAACCCTTTCCTATAGCTGCGATTGTTACTTTTCTTTGTTTTCTTCTTGCTATTTTCGTCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAATCTCTACAATCGGAGAGCGTGGGTACGAGGAATTGTAATTGTACTTGTTCGCTTAACGGTGGTGTGGTTATTAGGGGTTTGGACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTATTGGAGAAGGCGCCGGTAGTTGTTACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTAGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTATGCCGTTTGTCCATGACTAATTCTTTGATGCGCAAAGCCGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAATGGGTGGAAGTCTTATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCGTTTTTGGTTGAATGCAGATTATGTGAAGTGCATTCATGCTTCAGGAGAATTCTTTTCAGGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGACGTACGGGCTCGTGTGCTTACCGATATGGCTTGGGTTAGCATGAAAACCTATGTTGACATGGATACGGGGCCATTCAACGTAACCAACATTTACGAGTTTCATGATGGTCGATGGTACATGGTGCATCATCACAGCTCTGTAATGCTTATTGTTGGGGAGATGGAACAACAAATGGTTCATGGCTAA

Protein sequence

MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCNCTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSYYAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVMLIVGEMEQQMVHG

Homology

[Close]

BLAST of IVF0020012 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.3e-93
Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0


Query: 66  NGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITT 125
           NGG    G   R  +T+ST                     V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTST---------------------VADDKPGVSMMEQLVPEITT 67

Query: 126 HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSYYAATR 185
           HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP+NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 186 TIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQG 245
            I+++N +F+ IIRDR+LQAM+R WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 246 INFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVMLIVGE 305
            +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN++EFH+GRW+MVHHHSSVMLI  +
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLI--D 231

Query: 306 MEQQMVH 313
            +Q +VH
Sbjct: 248 DQQVVVH 231

[Close]

BLAST of IVF0020012 vs. ExPASy Swiss-Prot
Match: Q9T0B0 (Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.6e-35
Identity = 65/115 (56.52%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 115 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPI 174
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP+
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 175 NGWKSYYAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGY 230
           NGWK+++A T+ +M +N +F++I+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

[Close]

BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A5A7TU63 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003610 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.0e-176
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A1S3BTF9 (F-box protein SKIP8 OS=Cucumis melo OX=3656 GN=LOC103493084 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.0e-176
Identity = 312/313 (99.68%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEIVSSATIALSSQPFPIAAI+TFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIITFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A0A0KX34 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.4e-175
Identity = 310/313 (99.04%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTK+LQSESVGTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAV+QSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A6J1EUJ3 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 5.7e-167
Identity = 296/313 (94.57%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEI S+ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVPYIRRTK++Q E VGTRN N
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV I GL+PRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A6J1JB95 (F-box protein SKIP8 OS=Cucurbita maxima OX=3661 GN=LOC111483424 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165
Identity = 294/313 (93.93%), Postives = 302/313 (96.49%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEI S+ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVPYIRRT ++Q E VGTRN N
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTTTVQLEGVGTRNFN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV I GL+PRAEITSSTSTSMPYLNG AVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGHAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 314
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. NCBI nr
Match: KAA0044925.1 (F-box protein SKIP8 [Cucumis melo var. makuwa] >TYK16545.1 F-box protein SKIP8 [Cucumis melo var. makuwa])

HSP 1 Score: 625 bits (1613), Expect = 5.16e-226
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 313
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. NCBI nr
Match: XP_008451931.1 (PREDICTED: F-box protein SKIP8 [Cucumis melo])

HSP 1 Score: 625 bits (1612), Expect = 7.34e-226
Identity = 312/313 (99.68%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEIVSSATIALSSQPFPIAAI+TFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIITFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 313
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. NCBI nr
Match: XP_004149013.1 (F-box protein SKIP8 [Cucumis sativus] >KGN53419.1 hypothetical protein Csa_015225 [Cucumis sativus])

HSP 1 Score: 622 bits (1604), Expect = 1.22e-224
Identity = 310/313 (99.04%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTK+LQSESVGTRNCN
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQSESVGTRNCN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAV+QSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVVQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 313
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. NCBI nr
Match: XP_038880969.1 (F-box protein SKIP8-like [Benincasa hispida])

HSP 1 Score: 610 bits (1572), Expect = 9.19e-220
Identity = 302/313 (96.49%), Postives = 310/313 (99.04%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEI+SSATIALSSQPFPIAAIVTFLCFLLA+F AVRLVSVPYIRRTK+LQS ++GTRNCN
Sbjct: 1   MEIISSATIALSSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKALQSVALGTRNCN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGVVI GLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVVIGGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQ+AF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQLAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 313
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. NCBI nr
Match: XP_022931549.1 (F-box protein SKIP8-like [Cucurbita moschata] >XP_023553511.1 F-box protein SKIP8 [Cucurbita pepo subsp. pepo] >KAG6577135.1 F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015131.1 F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 595 bits (1533), Expect = 8.09e-214
Identity = 296/313 (94.57%), Postives = 304/313 (97.12%), Query Frame = 0


Query: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCN 60
           MEI S+ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVPYIRRTK++Q E VGTRN N
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEGVGTRNFN 60

Query: 61  CTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120
           CTCSLNGGV I GL+PRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV
Sbjct: 61  CTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLV 120

Query: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSY 180
           PEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVTPINGWK+Y
Sbjct: 121 PEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVTPINGWKAY 180

Query: 181 YAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240
           YAATRTIMNINAQFYNIIRDRSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAF
Sbjct: 181 YAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAF 240

Query: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVM 300
           NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYMVHHHSSVM
Sbjct: 241 NWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVM 300

Query: 301 LIVGEMEQQMVHG 313
           LIVGEMEQQMVHG
Sbjct: 301 LIVGEMEQQMVHG 313

[Close]

BLAST of IVF0020012 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94
Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0


Query: 66  NGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITT 125
           NGG    G   R  +T+ST                     V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTST---------------------VADDKPGVSMMEQLVPEITT 67

Query: 126 HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSYYAATR 185
           HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP+NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 186 TIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQG 245
            I+++N +F+ IIRDR+LQAM+R WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 246 INFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVMLIVGE 305
            +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN++EFH+GRW+MVHHHSSVMLI  +
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLI--D 231

Query: 306 MEQQMVH 313
            +Q +VH
Sbjct: 248 DQQVVVH 231

[Close]

BLAST of IVF0020012 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94
Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0


Query: 66  NGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITT 125
           NGG    G   R  +T+ST                     V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTST---------------------VADDKPGVSMMEQLVPEITT 67

Query: 126 HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSYYAATR 185
           HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP+NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 186 TIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQG 245
            I+++N +F+ IIRDR+LQAM+R WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 246 INFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVMLIVGE 305
            +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN++EFH+GRW+MVHHHSSVMLI  +
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLI--D 231

Query: 306 MEQQMVH 313
            +Q +VH
Sbjct: 248 DQQVVVH 231

[Close]

BLAST of IVF0020012 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94
Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0


Query: 66  NGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITT 125
           NGG    G   R  +T+ST                     V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTST---------------------VADDKPGVSMMEQLVPEITT 67

Query: 126 HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSYYAATR 185
           HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP+NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 186 TIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQG 245
            I+++N +F+ IIRDR+LQAM+R WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 246 INFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVMLIVGE 305
            +FQV  VR R+LTDMAWV+MK Y+++D GPF +TN++EFH+GRW+MVHHHSSVMLI  +
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLI--D 231

Query: 306 MEQQMVH 313
            +Q +VH
Sbjct: 248 DQQVVVH 231

[Close]

BLAST of IVF0020012 vs. TAIR 10
Match: AT4G23960.1 (F-box family protein )

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-36
Identity = 65/115 (56.52%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 115 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPI 174
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP+
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 175 NGWKSYYAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGY 230
           NGWK+++A T+ +M +N +F++I+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

The following BLAST results are available for this feature:

BLAST of IVF0020012 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YV9	5.3e-93	65.99	F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1	[more]
Q9T0B0	8.6e-35	56.52	Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE...	[more]

BLAST of IVF0020012 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TU63	3.0e-176	100.00	F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]
A0A1S3BTF9	4.0e-176	99.68	F-box protein SKIP8 OS=Cucumis melo OX=3656 GN=LOC103493084 PE=4 SV=1	[more]
A0A0A0KX34	3.4e-175	99.04	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 ...	[more]
A0A6J1EUJ3	5.7e-167	94.57	F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1	[more]
A0A6J1JB95	1.1e-165	93.93	F-box protein SKIP8 OS=Cucurbita maxima OX=3661 GN=LOC111483424 PE=4 SV=1	[more]

BLAST of IVF0020012 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044925.1	5.16e-226	100.00	F-box protein SKIP8 [Cucumis melo var. makuwa] >TYK16545.1 F-box protein SKIP8 [...	[more]
XP_008451931.1	7.34e-226	99.68	PREDICTED: F-box protein SKIP8 [Cucumis melo]	[more]
XP_004149013.1	1.22e-224	99.04	F-box protein SKIP8 [Cucumis sativus] >KGN53419.1 hypothetical protein Csa_01522...	[more]
XP_038880969.1	9.19e-220	96.49	F-box protein SKIP8-like [Benincasa hispida]	[more]
XP_022931549.1	8.09e-214	94.57	F-box protein SKIP8-like [Cucurbita moschata] >XP_023553511.1 F-box protein SKIP...	[more]

BLAST of IVF0020012 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10925.1	3.8e-94	65.99	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.2	3.8e-94	65.99	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.3	3.8e-94	65.99	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G23960.1	6.1e-36	56.52	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037401	SnoaL-like domain	PFAM	PF13474	SnoaL_3	coord: 187..300 e-value: 1.5E-26 score: 93.2
None	No IPR available	GENE3D	1.20.1280.50		coord: 104..157 e-value: 1.7E-6 score: 29.7
None	No IPR available	GENE3D	3.10.450.50		coord: 179..309 e-value: 1.9E-33 score: 117.4
IPR044260	F-box protein SKIP8-like	PANTHER	PTHR47124	F-BOX PROTEIN SKIP8	coord: 11..313
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 113..159 score: 8.59666
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 182..300
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 112..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0020012.2	IVF0020012.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding