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IVF0020012 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTACGATACCATTTCACGGGTCACCCAAAACCTCCACCTCCTTCTTCCGCCCTTCCGATACCGAAGAAATTCCGGCTCCGTCACCAGAGATCATTTCCCCCACAGTCATATCCGTCTCCGCCCAACGCATTTCATCTTCCTAACTCCACAGTTGACCATATTTTCCATACTTCACCTTCTCTCGGCGACGGCGCGTTTACACACCTTCCGCTGAAACCCGACGCCACAAATTTTCTTAGGGTTTCATGTTTTGTATGGTTGAACGTCATACAACGCTTTCATGTCGTTTGAATGGAGATTGTTTCTTCTGCCACCATTGCCTTGTCGTCCCAACCCTTTCCTATAGCTGCGATTGTTACTTTTCTTTGTTTTCTTCTTGCTATTTTCGTCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAATCTCTACAATCGGAGAGCGTGGGTACGAGGAATTGTAATTGTACTTGTTCGCTTAACGGTGGTGTGGTTATTAGGGGTTTGGACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTATTGGAGAAGGCGCCGGTAGTTGTTACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTAGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTATGCCGTTTGTCCATGACTAATTCTTTGATGCGCAAAGCCGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGTACGAGTTAGGTTTAATCTTCTTTGTACGGTTTTTCGTTTTCTAATTTATCTTTCTTCTTGAATATGAGTGCCGGGAAAGAAACACGAAAGGGAATATAGAATCTCTGTTCTTGGGAATATTGTTATGAAATTTTGCTACCATTATCTCGTCTACATTTACTCAACGTCTTTTTGTAGTTCTTCAAGGGAACGAATTGATTGTATTAACTTTTATATTTCAAGTAGTGGGATCGTTTCAATTGATGGGTTGTGGTCAAAAATTGCAAGAACTATCTCTATGCTTTCCTTGTTGTATTGTTCTTGATGTTTAAATCTATTTAGGATTCTCTGGGGCTAAAACAACCTTTCCATGAAATCTTTTAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAATGGGTGGAAGTCTTATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCGTTTTTGGTTGAATGCAGATTATGTGAAGTGCATTCATGCTTCAGGAGAATTCTTTTCAGGGTATTTACCTTCTTGTCTTATTTTTAGCATGATATCAGATTGCTGCTTCTTATGGCTAACTAAATTAGCAAACATGGCCAACATTTTCTTCTTCAGACTTGTGATTCTGTGAAGTTGCATATATTGCCCTCTTTTCTTTTTGTCTTCTTATGTGATCTTTACATTTTCTAAGCATTTTTACTGAGAAGGTGATATACAAGGGATAGTTAGAAATGACTCTAGGCTTATGGTTAGTGTCATATGCGTGTTTTGATTACCTGAATTTCTTGAATTTAAGTTGTTCTTTATATAAGAACATTTGTCGAGAATTACTTATTTACTATGTTGGACCGACAATAGACCTTGACCTTGTCTCTCTACTCTTTAGTATCACTTGAATGTAGTTCTAATGTTTCTTGAAGGGAAGAATTTTGACCATGCATATGGGCATGGATAACTAGATTCTGTGATTAGTGAGATACTGAAGAATGCTTCTTGTAATCCGCTCCTGCCATATCGAGTTCAATTTGAATTCGTATTAATCTTATGATATGTGATTATAAATGAAGTTGTTCAAGCATGTTGAGCTTGATCACTTTTTCCTCTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGTTGCAAATAACCTTTTGCGATCAACACTTTAGTTCTTGGTTGAACTATATTGAAGGGATTGAATGTTGAGCTTGTCAAGTTGCTAATATCTAGATGTTTAGACTATTTATGCATGTTATGTCATCCAACAACTCTTTGAATTCCTGTTATATGTTCAGTAAAGGCTTTCAAAGAAATTCACATAATCCGGTACTTACTATGTTTGGGATTTCTTTCTACAGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGACGTACGGGCTCGTGTGCTTACCGATATGGCTTGGGTTAGCATGAAAACCTATGTTGACATGGATACGGGGCCATTCAACGTAACCAACATTTACGAGTTTCATGATGGTCGATGGTACATGGTGCATCATCACAGCTCTGTAATGCTTATTGTTGGGGAGATGGAACAACAAATGGTTCATGGCTAACAGAGTGAAGATAGAAGAGAAAGTAAAGCATGGAAAAAATATACAATACTAGGTGGTACAAAGGTAGGGTGGTGTTTGGTAGAAGAAGCAAGATTTGAAGGAAAAAGAAAAAAAAAATTCTTGTCCATTACTTTTAATCAACACCATTTTAAACTGTTCCAACCTCAGTTTTTCTTGATCTGTGTTGATTGATCCCTTTTTTTTCTCTTTCAAAGCATTTTTTTTCTTCCATAGTTTGATTCCATGCTGAAGGCTGAAATGGCTATGCATGTGTTTCCAGCAATGAAGGAGTAGTCATTAACAAAGATTACCAAATATTTGTACTTCAATTTTCTGAAGTGTTGCTATTGAGATGCTCAATTAACTCCTCCA GTTACGATACCATTTCACGGGTCACCCAAAACCTCCACCTCCTTCTTCCGCCCTTCCGATACCGAAGAAATTCCGGCTCCGTCACCAGAGATCATTTCCCCCACAGTCATATCCGTCTCCGCCCAACGCATTTCATCTTCCTAACTCCACAGTTGACCATATTTTCCATACTTCACCTTCTCTCGGCGACGGCGCGTTTACACACCTTCCGCTGAAACCCGACGCCACAAATTTTCTTAGGGTTTCATGTTTTGTATGGTTGAACGTCATACAACGCTTTCATGTCGTTTGAATGGAGATTGTTTCTTCTGCCACCATTGCCTTGTCGTCCCAACCCTTTCCTATAGCTGCGATTGTTACTTTTCTTTGTTTTCTTCTTGCTATTTTCGTCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAATCTCTACAATCGGAGAGCGTGGGTACGAGGAATTGTAATTGTACTTGTTCGCTTAACGGTGGTGTGGTTATTAGGGGTTTGGACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTATTGGAGAAGGCGCCGGTAGTTGTTACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTAGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTATGCCGTTTGTCCATGACTAATTCTTTGATGCGCAAAGCCGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAATGGGTGGAAGTCTTATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCGTTTTTGGTTGAATGCAGATTATGTGAAGTGCATTCATGCTTCAGGAGAATTCTTTTCAGGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGACGTACGGGCTCGTGTGCTTACCGATATGGCTTGGGTTAGCATGAAAACCTATGTTGACATGGATACGGGGCCATTCAACGTAACCAACATTTACGAGTTTCATGATGGTCGATGGTACATGGTGCATCATCACAGCTCTGTAATGCTTATTGTTGGGGAGATGGAACAACAAATGGTTCATGGCTAACAGAGTGAAGATAGAAGAGAAAGTAAAGCATGGAAAAAATATACAATACTAGGTGGTACAAAGGTAGGGTGGTGTTTGGTAGAAGAAGCAAGATTTGAAGGAAAAAGAAAAAAAAAATTCTTGTCCATTACTTTTAATCAACACCATTTTAAACTGTTCCAACCTCAGTTTTTCTTGATCTGTGTTGATTGATCCCTTTTTTTTCTCTTTCAAAGCATTTTTTTTCTTCCATAGTTTGATTCCATGCTGAAGGCTGAAATGGCTATGCATGTGTTTCCAGCAATGAAGGAGTAGTCATTAACAAAGATTACCAAATATTTGTACTTCAATTTTCTGAAGTGTTGCTATTGAGATGCTCAATTAACTCCTCCA ATGGAGATTGTTTCTTCTGCCACCATTGCCTTGTCGTCCCAACCCTTTCCTATAGCTGCGATTGTTACTTTTCTTTGTTTTCTTCTTGCTATTTTCGTCGCCGTTCGATTGGTTTCTGTTCCTTACATTAGAAGGACGAAATCTCTACAATCGGAGAGCGTGGGTACGAGGAATTGTAATTGTACTTGTTCGCTTAACGGTGGTGTGGTTATTAGGGGTTTGGACCCCAGGGCTGAGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCAGTGGAAGTATTGGAGAAGGCGCCGGTAGTTGTTACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTAGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTATGCCGTTTGTCCATGACTAATTCTTTGATGCGCAAAGCCGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAATTAATGGGTGGAAGTCTTATTATGCTGCAACAAGAACAATTATGAATATCAATGCCCAATTCTATAACATCATCAGAGACAGGTCTCTTCAAGCGATGAGTCGTTTTTGGTTGAATGCAGATTATGTGAAGTGCATTCATGCTTCAGGAGAATTCTTTTCAGGGTATAATGCCGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAACAAGGGATTAATTTTCAGGTCCGTGACGTACGGGCTCGTGTGCTTACCGATATGGCTTGGGTTAGCATGAAAACCTATGTTGACATGGATACGGGGCCATTCAACGTAACCAACATTTACGAGTTTCATGATGGTCGATGGTACATGGTGCATCATCACAGCTCTGTAATGCTTATTGTTGGGGAGATGGAACAACAAATGGTTCATGGCTAA MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQSESVGTRNCNCTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPINGWKSYYAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYMVHHHSSVMLIVGEMEQQMVHG Homology
BLAST of IVF0020012 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 5.3e-93 Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0
BLAST of IVF0020012 vs. ExPASy Swiss-Prot
Match: Q9T0B0 (Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.6e-35 Identity = 65/115 (56.52%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A5A7TU63 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003610 PE=4 SV=1) HSP 1 Score: 627.5 bits (1617), Expect = 3.0e-176 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A1S3BTF9 (F-box protein SKIP8 OS=Cucumis melo OX=3656 GN=LOC103493084 PE=4 SV=1) HSP 1 Score: 627.1 bits (1616), Expect = 4.0e-176 Identity = 312/313 (99.68%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A0A0KX34 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 SV=1) HSP 1 Score: 624.0 bits (1608), Expect = 3.4e-175 Identity = 310/313 (99.04%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A6J1EUJ3 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 5.7e-167 Identity = 296/313 (94.57%), Postives = 304/313 (97.12%), Query Frame = 0
BLAST of IVF0020012 vs. ExPASy TrEMBL
Match: A0A6J1JB95 (F-box protein SKIP8 OS=Cucurbita maxima OX=3661 GN=LOC111483424 PE=4 SV=1) HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165 Identity = 294/313 (93.93%), Postives = 302/313 (96.49%), Query Frame = 0
BLAST of IVF0020012 vs. NCBI nr
Match: KAA0044925.1 (F-box protein SKIP8 [Cucumis melo var. makuwa] >TYK16545.1 F-box protein SKIP8 [Cucumis melo var. makuwa]) HSP 1 Score: 625 bits (1613), Expect = 5.16e-226 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of IVF0020012 vs. NCBI nr
Match: XP_008451931.1 (PREDICTED: F-box protein SKIP8 [Cucumis melo]) HSP 1 Score: 625 bits (1612), Expect = 7.34e-226 Identity = 312/313 (99.68%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of IVF0020012 vs. NCBI nr
Match: XP_004149013.1 (F-box protein SKIP8 [Cucumis sativus] >KGN53419.1 hypothetical protein Csa_015225 [Cucumis sativus]) HSP 1 Score: 622 bits (1604), Expect = 1.22e-224 Identity = 310/313 (99.04%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of IVF0020012 vs. NCBI nr
Match: XP_038880969.1 (F-box protein SKIP8-like [Benincasa hispida]) HSP 1 Score: 610 bits (1572), Expect = 9.19e-220 Identity = 302/313 (96.49%), Postives = 310/313 (99.04%), Query Frame = 0
BLAST of IVF0020012 vs. NCBI nr
Match: XP_022931549.1 (F-box protein SKIP8-like [Cucurbita moschata] >XP_023553511.1 F-box protein SKIP8 [Cucurbita pepo subsp. pepo] >KAG6577135.1 F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015131.1 F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 595 bits (1533), Expect = 8.09e-214 Identity = 296/313 (94.57%), Postives = 304/313 (97.12%), Query Frame = 0
BLAST of IVF0020012 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94 Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0
BLAST of IVF0020012 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94 Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0
BLAST of IVF0020012 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94 Identity = 163/247 (65.99%), Postives = 192/247 (77.73%), Query Frame = 0
BLAST of IVF0020012 vs. TAIR 10
Match: AT4G23960.1 (F-box family protein ) HSP 1 Score: 149.1 bits (375), Expect = 6.1e-36 Identity = 65/115 (56.52%), Postives = 89/115 (77.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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