
IVF0019861 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGTTTAGAAAATGCAGACAATGCTTCTCTTCGGAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAACAAGCCTAGGAACGCCAAGAAGAGGAAGCCCGATGTAAACCACAATCGCCATGCTCAAAATGCCACCAATAGTAGTGAAATCATTGCATCAGAGCCACTACCGTTGGAGCCCTTCAGTTTTTTTCTGAATGAGTTCCAGACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGAGTCCATGAAAGGTGCTTTACCAATCTGTGTCATATTCTTATTTATTTATTTATTTATTGCATGGAATACAGTGTAACATGTTTTGTAGTGTTTAATTGTTTTTGGCATCCTTTTTTTTAAGAAATTCGTGAGAGTTTATCTGGTTTTTGTTATGATTGGAAAATTTTGTAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATATTAAAGAAGCTCTTGGATCGTCGTGGAAAGAAGTTCTATGTAAAGGGGAACTCTTGGAAGGAAGGACTGAACCTGGTAGTCCTGCAGTTCTTATAATCAGCACATCTGCTCTTAGGTCGATTGAACTTCTAAAGTAAGATGGAGACTTTTTTTCTGCTAGTATGTGTTTGAAATAAGTGCGTGCTTTTGTGTAACTCATTTATATTTATCAGGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTAGGTGGAAGTTTCTTTTCATGATCTTTTCTCATTTAGATGACTTTGAGATAGGGGTAACATTTGTTTTTGTTGTTTAATGATGTTTCAAGTTGTATGGTTTACTTATTCTTTGAATTGAATGGTGGTTGTATATCAACACTAAACAGAGTGTGGATGATAATTGTTCATATTTTGCTAGCTGGAACAAGTGGGAAGAATTCTTGATATGTTTTTATAGGCCTGAAGTAGTCAAATTCTTATCTTTATGTTGAAAAACCCTTAGTTTCAAAATTTAGTTTGGGAGATGAAGATAATTCAAATAACCATCTGAGGCAAAAACACTGCTGAATTTAATGGTTTGCACGTCAGTCTGATCCTGTATTTTCATTACTTTTGCTTTTAGTTGTCCTGATTTCTGAAACTGATCTTATCTTTGTGATTTAATCCAGTTTTGATGTTCATGGTCACATGATTAATTTTGTGAAAAATGTTTGTTATACGTTGCTTCTCTTAATGAGCTTGGAAAGCTCAAGCAGTGATTTAGCTTCTTGATTCTTCAACACATATCAAGTAACAACATTCAGCATTAGCAATTGGTGATTTTTATGGCTCTATTGTTTTTTTTTTTTTTTGGTGTCTTGGCCAATTACTGGTTTCCAAAGTTTGTTTTATTTTATTTCTTTAATTGCGAGACTAGTTGTGCATCCGTCCAACTAGTTTACTTTTTTTTGTTTGGGAAGTGATGACAAACTAGAAAAATTTCTCAGATGCAGCTGCTATGCTGAACTTAGTATTTGCACGTCAGTCTGATCCCATTTTCTCAATGACATGGTTGTCATTTCTGGGCTTCTGAACGCTAGACTCGGTTTTTCCTTATTGTTTTTATCCTTTTTTTTCTAAATAAGGATAAAGAAATAGGTATTTTTGCATTCCCCGTTGACCTCTTCAAACAATCATTAACATCCTTAACTTTTCCTTTAACATTTTTGCGTTTCCTTTTCTCTTTGTCTTCCTACATCCATTTTGGACACAGATCTATTATTTTTATATGAAATCTTCAACTGAACTCCCAATATTATTTTCAGTTGCCTATGGTGATCACAATTATGTTATCTTATTTTTAAAGTGTGGGAAATGAAGACAAATTGAAATGTTCAACAGAGGTAGATACTATGCTGAACTCTATTTGCACGTCAGTCTGATCCCTCTAATTGTTTATTGGGTGTAATCTATGCAATTATTACATAAAATATTTTTCTTCGGTCTAAGATGTAAAGGGGGAGGAGGAAATTCCAGATTTTGTATTTCTGTTATGATTTAGATAATTCAGTCAAATTCACATATCTGCCGAACTGGCCAAATTCGTTTAAGCAATCAAAACTGCAGGTTGTCATGGTATATTAGCATCATTCTGAATGACATCTATTTTCAAATTTCTCAAACCATCTGTAATGCAACATTACTTTGCGGTTTTGCTGCATTATCATTATATTTCTTAAAACATCCTGTTATCGGTTTTGGTTTTGTCTCTTGAACTGTTATTCTTTTCCCCTTTATGATGGGTGCAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACGCCGAGCAGGTTGGCCTTTTATATTGGGTTTATCACTACGTTTAGGAGTTCTAGGTTCAGATTTTTGTTTCTAATGGAGTACTGTTGAGCATCTATATTGATAATCTACAATCTTCCGGGATCCATTTCTTCTTGCACATTAAAAGTTCATTCATTTGATTCCATTCATTCTGATACTTTCAATTGTTTGGCTGATCCTTTGTTACATTCTCTTCTGTGTCTATTTTAGGATAAAAAAATTGATTGACATTGAGGCCTTGGGGCTGTCAAGGCTAGCCGTTATTGTGCTCGACGTTCAACCAGATGTTAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGGTTTGAAAACCTCGTTTGTAACTTGTCTCTACTTTGTTCAATATATGTTCGAATCTTTTGTTCTATGCTCCTACATTGTGAAAGTACAAATTAAAAGAGCGTTTTTGTATAAATTCATATTGCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGTGTAGTCGAGGGCGAGTTGCGGATTTGCCTCTTCGGTCCTTTACAACCTACTCGTAAACGAAGGAAAAAAGAAGTTTAATTATTGTTAATGCATCCTCAAATACATCAGTTCCCACAAATTAATTTCATCACTTAAAATCATTTTTCCCCAACTTCCATTTCATTCCTATAATTACGATTTGGTTTGTTGTACCAAAATTTTGCAATCTGAGTTGAGTCATTTTGTTGTAGTTTTGCTTATAGTCTACCAAAATGTATCGGAAAAACGGTCATTCTTTTCTTGACGTCAAGCTCTGTGA ATGGTGGGTTTAGAAAATGCAGACAATGCTTCTCTTCGGAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAACAAGCCTAGGAACGCCAAGAAGAGGAAGCCCGATGTAAACCACAATCGCCATGCTCAAAATGCCACCAATAGTAGTGAAATCATTGCATCAGAGCCACTACCGTTGGAGCCCTTCAGTTTTTTTCTGAATGAGTTCCAGACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGAGTCCATGAAAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATATTAAAGAAGCTCTTGGATCGTCGTGGAAAGAAGTTCTATGTAAAGGGGAACTCTTGGAAGGAAGGACTGAACCTGGTAGTCCTGCAGTTCTTATAATCAGCACATCTGCTCTTAGGTCGATTGAACTTCTAAAGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACGCCGAGCAGGATAAAAAAATTGATTGACATTGAGGCCTTGGGGCTGTCAAGGCTAGCCGTTATTGTGCTCGACGTTCAACCAGATGTTAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGTGTAGTCGAGGGCGAGTTGCGGATTTGCCTCTTCGGTCCTTTACAACCTACTCGTAAACGAAGGAAAAAAGAAGTTTAATTATTGTTAATGCATCCTCAAATACATCAGTTCCCACAAATTAATTTCATCACTTAAAATCATTTTTCCCCAACTTCCATTTCATTCCTATAATTACGATTTGGTTTGTTGTACCAAAATTTTGCAATCTGAGTTGAGTCATTTTGTTGTAGTTTTGCTTATAGTCTACCAAAATGTATCGGAAAAACGGTCATTCTTTTCTTGACGTCAAGCTCTGTGA ATGGTGGGTTTAGAAAATGCAGACAATGCTTCTCTTCGGAACCCTAGAAATAAACGTAAACAGCGGCCTCCTAACAAGCCTAGGAACGCCAAGAAGAGGAAGCCCGATGTAAACCACAATCGCCATGCTCAAAATGCCACCAATAGTAGTGAAATCATTGCATCAGAGCCACTACCGTTGGAGCCCTTCAGTTTTTTTCTGAATGAGTTCCAGACGGCTAATGATGTGCAGGTTTCTTCTCTTGAGTTGGAGTCCATGAAAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAAGTTTGGTGAAACATATTAAAGAAGCTCTTGGATCGTCGTGGAAAGAAGTTCTATGTAAAGGGGAACTCTTGGAAGGAAGGACTGAACCTGGTAGTCCTGCAGTTCTTATAATCAGCACATCTGCTCTTAGGTCGATTGAACTTCTAAAGGGTTTTCGATCGATAACTCAAGAATGCCATGCTGTAAAGCTATTTTCGAAGCACATGAAGGTTGAGGAACAGGTACAGCTGTTGAAGAACCGTGTTAACATTGCGAGTGGTACGCCGAGCAGGATAAAAAAATTGATTGACATTGAGGCCTTGGGGCTGTCAAGGCTAGCCGTTATTGTGCTCGACGTTCAACCAGATGTTAAGGGATATTCTTTATTTTCACTTCCACAAGTCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACCCGCGTGTAGTCGAGGGCGAGTTGCGGATTTGCCTCTTCGGTCCTTTACAACCTACTCGTAAACGAAGGAAAAAAGAAGTTTAA MVGLENADNASLRNPRNKRKQRPPNKPRNAKKRKPDVNHNRHAQNATNSSEIIASEPLPLEPFSFFLNEFQTANDVQVSSLELESMKDRCILGPPESSVQDDKSLVKHIKEALGSSWKEVLCKGELLEGRTEPGSPAVLIISTSALRSIELLKGFRSITQECHAVKLFSKHMKVEEQVQLLKNRVNIASGTPSRIKKLIDIEALGLSRLAVIVLDVQPDVKGYSLFSLPQVRDEFWDLYKSYLHPRVVEGELRICLFGPLQPTRKRRKKEV Homology
BLAST of IVF0019861 vs. ExPASy Swiss-Prot
Match: Q5XJK9 (Protein CMSS1 OS=Danio rerio OX=7955 GN=cmss1 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.2e-14 Identity = 72/242 (29.75%), Postives = 118/242 (48.76%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy Swiss-Prot
Match: Q9CZT6 (Protein CMSS1 OS=Mus musculus OX=10090 GN=Cmss1 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.6e-13 Identity = 65/213 (30.52%), Postives = 107/213 (50.23%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy Swiss-Prot
Match: Q9BQ75 (Protein CMSS1 OS=Homo sapiens OX=9606 GN=CMSS1 PE=1 SV=2) HSP 1 Score: 73.9 bits (180), Expect = 3.0e-12 Identity = 70/248 (28.23%), Postives = 119/248 (47.98%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy Swiss-Prot
Match: Q68EV5 (Protein CMSS1 OS=Xenopus laevis OX=8355 GN=cmss1 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 6.8e-12 Identity = 70/246 (28.46%), Postives = 120/246 (48.78%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy Swiss-Prot
Match: Q5FVR6 (Protein CMSS1 OS=Rattus norvegicus OX=10116 GN=Cmss1 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 68/245 (27.76%), Postives = 121/245 (49.39%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy TrEMBL
Match: A0A1S3BYM0 (protein CMSS1 OS=Cucumis melo OX=3656 GN=LOC103494501 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 3.7e-146 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy TrEMBL
Match: A0A5D3CZG6 (Protein CMSS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00910 PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 1.8e-145 Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy TrEMBL
Match: A0A5A7TR86 (Protein CMSS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003890 PE=4 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 3.1e-145 Identity = 269/271 (99.26%), Postives = 269/271 (99.26%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy TrEMBL
Match: A0A0A0KUA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017160 PE=4 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141 Identity = 259/271 (95.57%), Postives = 265/271 (97.79%), Query Frame = 0
BLAST of IVF0019861 vs. ExPASy TrEMBL
Match: A0A6J1GWA7 (protein CMS1 OS=Cucurbita moschata OX=3662 GN=LOC111458074 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118 Identity = 227/271 (83.76%), Postives = 244/271 (90.04%), Query Frame = 0
BLAST of IVF0019861 vs. NCBI nr
Match: XP_008453922.1 (PREDICTED: protein CMSS1 [Cucumis melo]) HSP 1 Score: 526 bits (1355), Expect = 4.26e-188 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of IVF0019861 vs. NCBI nr
Match: TYK16952.1 (protein CMSS1 [Cucumis melo var. makuwa]) HSP 1 Score: 524 bits (1349), Expect = 3.50e-187 Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0
BLAST of IVF0019861 vs. NCBI nr
Match: KAA0044636.1 (protein CMSS1 [Cucumis melo var. makuwa]) HSP 1 Score: 523 bits (1347), Expect = 7.06e-187 Identity = 269/271 (99.26%), Postives = 269/271 (99.26%), Query Frame = 0
BLAST of IVF0019861 vs. NCBI nr
Match: XP_004152079.1 (protein CMSS1 [Cucumis sativus] >KGN53128.1 hypothetical protein Csa_014754 [Cucumis sativus]) HSP 1 Score: 511 bits (1316), Expect = 3.75e-182 Identity = 259/271 (95.57%), Postives = 265/271 (97.79%), Query Frame = 0
BLAST of IVF0019861 vs. NCBI nr
Match: XP_038906109.1 (protein CMS1 isoform X3 [Benincasa hispida]) HSP 1 Score: 469 bits (1207), Expect = 3.05e-165 Identity = 241/274 (87.96%), Postives = 256/274 (93.43%), Query Frame = 0
BLAST of IVF0019861 vs. TAIR 10
Match: AT2G43110.1 (unknown protein; Has 212 Blast hits to 211 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70 Identity = 147/280 (52.50%), Postives = 196/280 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|