IVF0019777 (gene) Melon (IVF77) v1

Overview
NameIVF0019777
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr10: 16626817 .. 16627246 (-)
RNA-Seq ExpressionIVF0019777
SyntenyIVF0019777
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTAAACTCGATGAAGTTTACCATAATGTAGAAGAAGTGCCTCCTGCAAACACAGAGCCAAATTGGTTATGGTAGTCCGATGACGATGATACCAACATTTGGAACAGGATATTGTGATTCTGAGGTCGGTACAAGATATTATGATGCAAGGGTCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCGACTTCTTACATGCATGGACACAAACGTGGCTATGGGAAACATAACAAATATTTGTATCATGTGTATCATGAAGCACCTGTAGAGGTATAGATCGACAACGACAAGAGTACCAATAAGGACCAAATAACCAAGAAGACAAAAAACAACATAGAGTTCATAGTGGACATCGACAATCGATGA

mRNA sequence

ATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTAAACTCGATGAAAGCCAAATTGGTTATGGTAGTCCGATGACGATGATACCAACATTTGGAACAGGATATTGTGATTCTGAGGTCGGTACAAGATATTATGATGCAAGGGTCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCGACTTCTTACATGCATGGACACAAACGTGGCTATGGGAAACATAACAAATATTTGTATCATATCGACAACGACAAGAGTACCAATAAGGACCAAATAACCAAGAAGACAAAAAACAACATAGAGTTCATAGTGGACATCGACAATCGATGA

Coding sequence (CDS)

ATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTAAACTCGATGAAAGCCAAATTGGTTATGGTAGTCCGATGACGATGATACCAACATTTGGAACAGGATATTGTGATTCTGAGGTCGGTACAAGATATTATGATGCAAGGGTCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCGACTTCTTACATGCATGGACACAAACGTGGCTATGGGAAACATAACAAATATTTGTATCATATCGACAACGACAAGAGTACCAATAAGGACCAAATAACCAAGAAGACAAAAAACAACATAGAGTTCATAGTGGACATCGACAATCGATGA

Protein sequence

MYDLPIVPPPVHRGRVRVEEAKLDESQIGYGSPMTMIPTFGTGYCDSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYHIDNDKSTNKDQITKKTKNNIEFIVDIDNR
Homology
[Close]
BLAST of IVF0019777 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34
Identity = 74/105 (70.48%), Postives = 79/105 (75.24%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLDE---------------SQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVPP VHRGRVRVEE +LDE               SQ GYGSPM M+PTFG GYC
Sbjct: 1   MYDLPIVPPRVHRGRVRVEEVELDEVYHNVEEVPPTTQTQSQTGYGSPMMMMPTFGAGYC 60

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 91
           DSEV T YYDA +GP SSYMDVGPS SYMHGH RGYG+HN+YLYH
Sbjct: 61  DSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYLYH 105

[Close]
BLAST of IVF0019777 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34
Identity = 74/105 (70.48%), Postives = 81/105 (77.14%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLD---------------ESQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVPPPVHRG VRVEEA+LD               +SQ GYGSPMTM+PTF  GYC
Sbjct: 60  MYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYC 119

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 91
           D EVG  YYDA VGPSSSY+DV PSTSYMHGH+RGYG+HN+YLYH
Sbjct: 120 DFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYH 164

[Close]
BLAST of IVF0019777 vs. ExPASy TrEMBL
Match: A0A5A7V379 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29891G00010 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34
Identity = 75/105 (71.43%), Postives = 80/105 (76.19%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLDE---------------SQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVP PVHRGRVRVEEA+LDE               SQ GYGSPMTM+PTFG GYC
Sbjct: 1   MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVSPTTQTQSQTGYGSPMTMMPTFGAGYC 60

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 91
           DSEV T YYD  VG SSSYM+VGPS SYMHGH RGYG+HN+YLYH
Sbjct: 61  DSEVDTGYYDVGVGSSSSYMNVGPSASYMHGHGRGYGEHNEYLYH 105

[Close]
BLAST of IVF0019777 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.9e-34
Identity = 74/105 (70.48%), Postives = 80/105 (76.19%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLD---------------ESQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVPPPVHRG VRVEEA+LD               +SQ GYGSPMTM+PTF  GYC
Sbjct: 72  MYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYC 131

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 91
           D EVG  YYDA VGPSSSY+DV PSTSYMHGH RGYG+HN+YLYH
Sbjct: 132 DFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGYGEHNEYLYH 176

[Close]
BLAST of IVF0019777 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.4e-34
Identity = 76/123 (61.79%), Postives = 88/123 (71.54%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLDE---------------SQIGYGSPMTMIPTFGTGYC 60
           +YDLPIVPPPVHR R RVEEA+LDE               SQ GYGSPMTM+PTFG GYC
Sbjct: 350 IYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYC 409

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYHIDNDKSTNKDQITKK 109
           DSEV   YYDA VGP SSYMDVGPSTSYM+GH RGYG+HN+YLYH      +++ +  ++
Sbjct: 410 DSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGRGYGEHNEYLYHEAPTDVSDRQEYQQE 469

[Close]
BLAST of IVF0019777 vs. NCBI nr
Match: KAA0061327.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 153 bits (386), Expect = 1.93e-45
Identity = 75/105 (71.43%), Postives = 80/105 (76.19%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLDE---------------SQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVP PVHRGRVRVEEA+LDE               SQ GYGSPMTM+PTFG GYC
Sbjct: 1   MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVSPTTQTQSQTGYGSPMTMMPTFGAGYC 60

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 90
           DSEV T YYD  VG SSSYM+VGPS SYMHGH RGYG+HN+YLYH
Sbjct: 61  DSEVDTGYYDVGVGSSSSYMNVGPSASYMHGHGRGYGEHNEYLYH 105

[Close]
BLAST of IVF0019777 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 153 bits (386), Expect = 6.07e-45
Identity = 74/105 (70.48%), Postives = 79/105 (75.24%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLDE---------------SQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVPP VHRGRVRVEE +LDE               SQ GYGSPM M+PTFG GYC
Sbjct: 1   MYDLPIVPPRVHRGRVRVEEVELDEVYHNVEEVPPTTQTQSQTGYGSPMMMMPTFGAGYC 60

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 90
           DSEV T YYDA +GP SSYMDVGPS SYMHGH RGYG+HN+YLYH
Sbjct: 61  DSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYLYH 105

[Close]
BLAST of IVF0019777 vs. NCBI nr
Match: TYK16354.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 151 bits (381), Expect = 1.11e-44
Identity = 74/105 (70.48%), Postives = 79/105 (75.24%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLDE---------------SQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVP PVHRGRVRVEEA+LDE               SQ GYG PMTM+PTFG GYC
Sbjct: 1   MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGRPMTMMPTFGAGYC 60

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 90
           DSEV T YYD  VG SSSYM+VGPS SYMHGH RGYG+HN+YLYH
Sbjct: 61  DSEVDTGYYDVGVGSSSSYMNVGPSASYMHGHGRGYGEHNEYLYH 105

[Close]
BLAST of IVF0019777 vs. NCBI nr
Match: KAA0062992.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 150 bits (378), Expect = 3.18e-44
Identity = 74/105 (70.48%), Postives = 79/105 (75.24%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLDE---------------SQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVP PVHRGRVRVEEA+LDE               SQ GYGSPMTM+PTFG GYC
Sbjct: 1   MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVSPTTQTQSQTGYGSPMTMMPTFGAGYC 60

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 90
           DSEV T YYD  VG SSSYM+VG S SYMHGH RGYG+HN+YLYH
Sbjct: 61  DSEVDTGYYDVGVGSSSSYMNVGSSASYMHGHGRGYGEHNEYLYH 105

[Close]
BLAST of IVF0019777 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 153 bits (386), Expect = 3.58e-44
Identity = 74/105 (70.48%), Postives = 81/105 (77.14%), Query Frame = 0 

Query: 1   MYDLPIVPPPVHRGRVRVEEAKLD---------------ESQIGYGSPMTMIPTFGTGYC 60
           MYDLPIVPPPVHRG VRVEEA+LD               +SQ GYGSPMTM+PTF  GYC
Sbjct: 60  MYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYC 119

Query: 61  DSEVGTRYYDARVGPSSSYMDVGPSTSYMHGHKRGYGKHNKYLYH 90
           D EVG  YYDA VGPSSSY+DV PSTSYMHGH+RGYG+HN+YLYH
Sbjct: 120 DFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYH 164

The following BLAST results are available for this feature:
BLAST of IVF0019777 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0019777 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CXX31.7e-3470.48GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5D3BSG81.7e-3470.48GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7V3791.7e-3471.43GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7V3422.9e-3470.48Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5D3DJV76.4e-3461.79Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
BLAST of IVF0019777 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061327.11.93e-4571.43GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0049532.16.07e-4570.48GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
TYK16354.11.11e-4470.48GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0062992.13.18e-4470.48GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
TYK01176.13.58e-4470.48GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
BLAST of IVF0019777 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0019777.1IVF0019777.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048507 meristem development