IVF0019734 (gene) Melon (IVF77) v1

Overview


Name	IVF0019734
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr09: 5366954 .. 5367487 (-)
RNA-Seq Expression	IVF0019734
Synteny	IVF0019734

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGCAGTACTGGCGACGCCGCCATTTACAGCCGAAAACTCGACATTTTCCTCATCGCCATCGGCTCCGCCGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCACCTCCGGCGACCAATCGTCGGCGAACGACCCTCACACCTTACCGATAACAGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGCGGTGGCGGTGTCGGTAAAGATGTCGACGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCTGAGTGTAAGCATTCGTATCACATGCCTTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTAATGATAGGCTGCAATTTCAAACGCAGCCCAATTCTGGGATTGTTGTGCACGTGCTTCCCACGAGGGGTTGA

mRNA sequence

ATGTCAAGCAGTACTGGCGACGCCGCCATTTACAGCCGAAAACTCGACATTTTCCTCATCGCCATCGGCTCCGCCGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCACCTCCGGCGACCAATCGTCGGCGAACGACCCTCACACCTTACCGATAACAGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGCGGTGGCGGTGTCGGTAAAGATGTCGACGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCTGAGTGTAAGCATTCGTATCACATGCCTTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTAATGATAGGCTGCAATTTCAAACGCAGCCCAATTCTGGGATTGTTGTGCACGTGCTTCCCACGAGGGGTTGA

Coding sequence (CDS)

ATGTCAAGCAGTACTGGCGACGCCGCCATTTACAGCCGAAAACTCGACATTTTCCTCATCGCCATCGGCTCCGCCGGCGCCGTCGTCACCATTTACCACTGCATCATGGCTTGTTGGTGCGATCGCCGCCGCTTCACCTCCGGCGACCAATCGTCGGCGAACGACCCTCACACCTTACCGATAACAGATACGCCGCGGAGCACCGAGAATTCGGTGGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCGAATGGCGGTGGACGGCGGCGGTGGCGGTGTCGGTAAAGATGTCGACGGGGATGGCACGTGCGCGATTTGTTTGAGTGAATTTGAAGAAGGGGAGGAAATAAAGACGTTGCCTGAGTGTAAGCATTCGTATCACATGCCTTGTATCGACATGTGGCTTTACTCTCACTCGAGCTGTCCGATGTGTCGTACTAATGCTACTCCGACGTCGTTTAATGATAGGCTGCAATTTCAAACGCAGCCCAATTCTGGGATTGTTGTGCACGTGCTTCCCACGAGGGGTTGA

Protein sequence

MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG

Homology

[Close]

BLAST of IVF0019734 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 0


Query: 17  IFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQS-SANDPHTLPITDTPRSTEN----- 76
           I LI I ++  ++  Y+ +++ +C R   TS  ++ + N       + T R + N     
Sbjct: 59  IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLN 118

Query: 77  -SVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPECKHSYHM 136
            S++  I  +KY+        G G    VDG   C++CLSEFEE E ++ LP+C H++H+
Sbjct: 119 ESMIKSITVYKYK-------SGDGF---VDG-SDCSVCLSEFEENESLRLLPKCNHAFHL 178

Query: 137 PCIDMWLYSHSSCPMCRTNAT 151
           PCID WL SHS+CP+CR   T
Sbjct: 179 PCIDTWLKSHSNCPLCRAFVT 188

[Close]

BLAST of IVF0019734 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-15
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 17  IFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITDTPRSTENSVVHLI 76
           I LI I ++  ++  Y+ +++ +C RRR  S   S+A   + +    T + T N+     
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA-AINRISSDYTWQGTNNN----- 120

Query: 77  PAHKYEKRMAVDGGGGGVGKD--------------VDG---DGTCAICLSEFEEGEEIKT 136
             +         GGGGG G D              +DG      C++CLSEF+E E ++ 
Sbjct: 121 NNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRL 180

Query: 137 LPECKHSYHMPCIDMWLYSHSSCPMCR 147
           LP+C H++H+PCID WL SHS+CP+CR
Sbjct: 181 LPKCNHAFHVPCIDTWLKSHSNCPLCR 201

[Close]

BLAST of IVF0019734 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.3e-15
Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 20  IAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSAN----------------DPHTLPITD 79
           IA+G    + T+      C  D RR T+  +S+ +                D   L   D
Sbjct: 41  IALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDNEDLEAGD 100

Query: 80  TPRSTENSVVHLIPAHKYEKRMAV---DGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 139
                + +V++  P   + K  +    DG GGG      GD TC+ICL E++E E ++ +
Sbjct: 101 VVVGLDQAVINSYPKFHFSKDTSAASSDGFGGG------GDTTCSICLCEYKEAEMLRMM 160

Query: 140 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPT 153
           PECKH +H+ C+D WL  + SCP+CR +  PT
Sbjct: 161 PECKHYFHLCCLDAWLKLNGSCPVCRNSPLPT 186

[Close]

BLAST of IVF0019734 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.3e-15
Identity = 44/129 (34.11%), Postives = 64/129 (49.61%), Query Frame = 0


Query: 27  AVVTIYHCIMACWCD-RRRFTSGDQSSANDPHTLPIT--------DTPRSTENSVVHLIP 86
           A +T+   ++ C+CD RRR  +   +S       P           T    +  V+  +P
Sbjct: 49  AALTLAFVLLQCYCDERRRAVTTTSTSGRGRRPRPRRRSGSGGDGGTGGGVDPEVLRSLP 108

Query: 87  AHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPECKHSYHMPCIDMWLY 146
              Y +  A         +D DG   CA+CL+E E+GEE + LP C H +H  C+DMWL 
Sbjct: 109 VTVYSRSTAAAAAKEEEEEDDDG-VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG 168

[Close]

BLAST of IVF0019734 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-14
Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 66  RSTENSVVHLIPAHKYEKRMAVDGG---GGGVGKDVDGDGTCAICLSEFEEGEEIKTLPE 125
           R  + SV+  IP  K++KR   + G   G G  ++      C++CLSEF++ E+++ +P 
Sbjct: 97  RGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPN 156

Query: 126 CKHSYHMPCIDMWLYSHSSCPMCRTNAT-PTSF 155
           C H +H+ CID+WL ++++CP+CRT  +  TSF
Sbjct: 157 CSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

[Close]

BLAST of IVF0019734 vs. ExPASy TrEMBL
Match: A0A5D3DI14 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00280 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 6.9e-101
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60
           MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP
Sbjct: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60

Query: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120
           ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL
Sbjct: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120

Query: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG 178
           PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG
Sbjct: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG 177

[Close]

BLAST of IVF0019734 vs. ExPASy TrEMBL
Match: A0A1S3C9L0 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498194 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 6.9e-101
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60
           MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP
Sbjct: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60

Query: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120
           ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL
Sbjct: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120

Query: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG 178
           PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG
Sbjct: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG 177

[Close]

BLAST of IVF0019734 vs. ExPASy TrEMBL
Match: A0A0A0KNT5 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G512950 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 8.7e-96
Identity = 171/177 (96.61%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60
           MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRF SGDQSS NDPHTLP
Sbjct: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFLSGDQSSVNDPHTLP 60

Query: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120
           ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGG  GKDVDGDGTCAICLSEFEEGEEIKTL
Sbjct: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGG--GKDVDGDGTCAICLSEFEEGEEIKTL 120

Query: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG 178
           PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQF+TQ NSGIVVHVLPTRG
Sbjct: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFETQSNSGIVVHVLPTRG 175

[Close]

BLAST of IVF0019734 vs. ExPASy TrEMBL
Match: A0A6J1FG87 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111445137 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.1e-77
Identity = 136/173 (78.61%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITD 63
           S+ DAA+YS+KLDIFLIA+GSAGAVVTIYHCIMACWCDRRR  +GDQ+ AND H++ + +
Sbjct: 2   SSSDAAVYSQKLDIFLIAVGSAGAVVTIYHCIMACWCDRRRLNAGDQTPANDLHSMSLAE 61

Query: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPEC 123
           TPRSTENSVVHLIPAHKYEK+ AVD GG       DGDGTCAICLSEFEEGEEI+TLPEC
Sbjct: 62  TPRSTENSVVHLIPAHKYEKQKAVDSGG------CDGDGTCAICLSEFEEGEEIRTLPEC 121

Query: 124 KHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTR 177
            HSYH+PCIDMWLYSHSSCPMCRT+ATPTS +DRLQF+TQP+SGI+VHV PTR
Sbjct: 122 LHSYHVPCIDMWLYSHSSCPMCRTDATPTSVHDRLQFETQPSSGIIVHVRPTR 168

[Close]

BLAST of IVF0019734 vs. ExPASy TrEMBL
Match: A0A6J1BX43 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111006127 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 8.8e-56
Identity = 117/180 (65.00%), Postives = 130/180 (72.22%), Query Frame = 0


Query: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFT--SGDQSSANDPHTLPI 63
           S  +A  YS KLDIFLIA+GSAG VVTIYHCIMACWCDRRR +   G   +A D H+LP 
Sbjct: 7   SPSEAIAYSHKLDIFLIAVGSAGIVVTIYHCIMACWCDRRRPSGGGGQTPAARDLHSLPG 66

Query: 64  TDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLP 123
            +TPRSTENSVVHLIPAHKYEKRM              GDGTCAICLSEFEEGE+++TLP
Sbjct: 67  LETPRSTENSVVHLIPAHKYEKRM---------DHLEVGDGTCAICLSEFEEGEDLRTLP 126

Query: 124 ECKHSYHMPCIDMWLYSHSSCPMCRTNATPTS-----FNDRLQFQTQPNSGIVVHVLPTR 177
           EC HSYH+PCIDMWLYSHSSCPMCR +ATPT      F D L  +    S +VVHV  TR
Sbjct: 127 ECMHSYHVPCIDMWLYSHSSCPMCRADATPTPSSPAVFRDGLDSE----SVVVVHVRATR 173

[Close]

BLAST of IVF0019734 vs. NCBI nr
Match: XP_008458935.1 (PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo] >KAA0042487.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa] >TYK22889.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 373 bits (958), Expect = 1.05e-130
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60
           MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP
Sbjct: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60

Query: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120
           ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL
Sbjct: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120

Query: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG 177
           PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG
Sbjct: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG 177

[Close]

BLAST of IVF0019734 vs. NCBI nr
Match: XP_004142830.1 (RING-H2 finger protein ATL52 [Cucumis sativus])

HSP 1 Score: 357 bits (915), Expect = 3.55e-124
Identity = 171/177 (96.61%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60
           MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRF SGDQSS NDPHTLP
Sbjct: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFLSGDQSSVNDPHTLP 60

Query: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120
           ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGG  KDVDGDGTCAICLSEFEEGEEIKTL
Sbjct: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGG--KDVDGDGTCAICLSEFEEGEEIKTL 120

Query: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTRG 177
           PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQF+TQ NSGIVVHVLPTRG
Sbjct: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFETQSNSGIVVHVLPTRG 175

[Close]

BLAST of IVF0019734 vs. NCBI nr
Match: KAE8648538.1 (hypothetical protein Csa_008705 [Cucumis sativus])

HSP 1 Score: 345 bits (884), Expect = 1.32e-114
Identity = 165/171 (96.49%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLP 60
           MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRF SGDQSS NDPHTLP
Sbjct: 1   MSSSTGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFLSGDQSSVNDPHTLP 60

Query: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 120
           ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGG  KDVDGDGTCAICLSEFEEGEEIKTL
Sbjct: 61  ITDTPRSTENSVVHLIPAHKYEKRMAVDGGGGG--KDVDGDGTCAICLSEFEEGEEIKTL 120

Query: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVH 171
           PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQF+TQ NSGIVVH
Sbjct: 121 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFETQSNSGIVVH 169

[Close]

BLAST of IVF0019734 vs. NCBI nr
Match: XP_038889238.1 (probable E3 ubiquitin-protein ligase ATL44 [Benincasa hispida])

HSP 1 Score: 318 bits (814), Expect = 7.77e-109
Identity = 151/171 (88.30%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITD 63
           S  DA IYSRKLDIFL+AIGSAGAVVTIYHCIMACWCDRRRF SG Q+ ANDPH+LPITD
Sbjct: 2   SDTDATIYSRKLDIFLVAIGSAGAVVTIYHCIMACWCDRRRFNSGGQTPANDPHSLPITD 61

Query: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPEC 123
           TPRSTENSVVHLIPAHKYEKRMAVDGGG G G   +GDGTCAICLSEFEEGEEIKTLPEC
Sbjct: 62  TPRSTENSVVHLIPAHKYEKRMAVDGGGCG-GDHGEGDGTCAICLSEFEEGEEIKTLPEC 121

Query: 124 KHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLP 174
            HSYH+PCIDMWLYSHSSCPMCRTNATPTSF+DRLQF+TQP+SGIVVHVLP
Sbjct: 122 MHSYHVPCIDMWLYSHSSCPMCRTNATPTSFHDRLQFETQPSSGIVVHVLP 171

[Close]

BLAST of IVF0019734 vs. NCBI nr
Match: XP_022939139.1 (RING-H2 finger protein ATL52-like [Cucurbita moschata] >KAG7016242.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294 bits (752), Expect = 2.12e-99
Identity = 136/173 (78.61%), Postives = 154/173 (89.02%), Query Frame = 0


Query: 4   STGDAAIYSRKLDIFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITD 63
           S+ DAA+YS+KLDIFLIA+GSAGAVVTIYHCIMACWCDRRR  +GDQ+ AND H++ + +
Sbjct: 2   SSSDAAVYSQKLDIFLIAVGSAGAVVTIYHCIMACWCDRRRLNAGDQTPANDLHSMSLAE 61

Query: 64  TPRSTENSVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPEC 123
           TPRSTENSVVHLIPAHKYEK+ AVD GG       DGDGTCAICLSEFEEGEEI+TLPEC
Sbjct: 62  TPRSTENSVVHLIPAHKYEKQKAVDSGG------CDGDGTCAICLSEFEEGEEIRTLPEC 121

Query: 124 KHSYHMPCIDMWLYSHSSCPMCRTNATPTSFNDRLQFQTQPNSGIVVHVLPTR 176
            HSYH+PCIDMWLYSHSSCPMCRT+ATPTS +DRLQF+TQP+SGI+VHV PTR
Sbjct: 122 LHSYHVPCIDMWLYSHSSCPMCRTDATPTSVHDRLQFETQPSSGIIVHVRPTR 168

[Close]

BLAST of IVF0019734 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 9.4e-18
Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 0


Query: 17  IFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQS-SANDPHTLPITDTPRSTEN----- 76
           I LI I ++  ++  Y+ +++ +C R   TS  ++ + N       + T R + N     
Sbjct: 59  IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLN 118

Query: 77  -SVVHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPECKHSYHM 136
            S++  I  +KY+        G G    VDG   C++CLSEFEE E ++ LP+C H++H+
Sbjct: 119 ESMIKSITVYKYK-------SGDGF---VDG-SDCSVCLSEFEENESLRLLPKCNHAFHL 178

Query: 137 PCIDMWLYSHSSCPMCRTNAT 151
           PCID WL SHS+CP+CR   T
Sbjct: 179 PCIDTWLKSHSNCPLCRAFVT 188

[Close]

BLAST of IVF0019734 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-16
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 17  IFLIAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSANDPHTLPITDTPRSTENSVVHLI 76
           I LI I ++  ++  Y+ +++ +C RRR  S   S+A   + +    T + T N+     
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA-AINRISSDYTWQGTNNN----- 120

Query: 77  PAHKYEKRMAVDGGGGGVGKD--------------VDG---DGTCAICLSEFEEGEEIKT 136
             +         GGGGG G D              +DG      C++CLSEF+E E ++ 
Sbjct: 121 NNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRL 180

Query: 137 LPECKHSYHMPCIDMWLYSHSSCPMCR 147
           LP+C H++H+PCID WL SHS+CP+CR
Sbjct: 181 LPKCNHAFHVPCIDTWLKSHSNCPLCR 201

[Close]

BLAST of IVF0019734 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 5.2e-16
Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 20  IAIGSAGAVVTIYHCIMACWCDRRRFTSGDQSSAN----------------DPHTLPITD 79
           IA+G    + T+      C  D RR T+  +S+ +                D   L   D
Sbjct: 41  IALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDNEDLEAGD 100

Query: 80  TPRSTENSVVHLIPAHKYEKRMAV---DGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTL 139
                + +V++  P   + K  +    DG GGG      GD TC+ICL E++E E ++ +
Sbjct: 101 VVVGLDQAVINSYPKFHFSKDTSAASSDGFGGG------GDTTCSICLCEYKEAEMLRMM 160

Query: 140 PECKHSYHMPCIDMWLYSHSSCPMCRTNATPT 153
           PECKH +H+ C+D WL  + SCP+CR +  PT
Sbjct: 161 PECKHYFHLCCLDAWLKLNGSCPVCRNSPLPT 186

[Close]

BLAST of IVF0019734 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-15
Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 66  RSTENSVVHLIPAHKYEKRMAVDGG---GGGVGKDVDGDGTCAICLSEFEEGEEIKTLPE 125
           R  + SV+  IP  K++KR   + G   G G  ++      C++CLSEF++ E+++ +P 
Sbjct: 97  RGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPN 156

Query: 126 CKHSYHMPCIDMWLYSHSSCPMCRTNAT-PTSF 155
           C H +H+ CID+WL ++++CP+CRT  +  TSF
Sbjct: 157 CSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

[Close]

BLAST of IVF0019734 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-15
Identity = 42/138 (30.43%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 22  IGSAGAVVTIYHCIMACWCD-------RRRFTSGDQS--SANDPHTLPITDTPRSTENSV 81
           + +A  +V+ Y  ++ C  +       RRR  S DQ+      PH     +  R  + S 
Sbjct: 52  LATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPH-----EVNRGLDESA 111

Query: 82  VHLIPAHKYEKRMAVDGGGGGVGKDVDGDGTCAICLSEFEEGEEIKTLPECKHSYHMPCI 141
           +  IP  K++KR  V     G          C++CL+EF+E E+++ +P C H +H+ CI
Sbjct: 112 IRAIPVFKFKKRDVV----AGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCI 171

Query: 142 DMWLYSHSSCPMCRTNAT 151
           D+WL  +++CP+CRT+ +
Sbjct: 172 DIWLQGNANCPLCRTSVS 180

The following BLAST results are available for this feature:

BLAST of IVF0019734 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	1.3e-16	35.46	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	1.5e-15	34.01	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
O82353	7.3e-15	31.58	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
Q9LRB7	7.3e-15	34.11	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
Q9LSW9	2.1e-14	37.63	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]

BLAST of IVF0019734 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DI14	6.9e-101	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C9L0	6.9e-101	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498194 PE=3 ...	[more]
A0A0A0KNT5	8.7e-96	96.61	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_5G512950 PE...	[more]
A0A6J1FG87	9.1e-77	78.61	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111445137...	[more]
A0A6J1BX43	8.8e-56	65.00	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11100612...	[more]

BLAST of IVF0019734 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458935.1	1.05e-130	100.00	PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo] >KAA0042487.1 RING-H...	[more]
XP_004142830.1	3.55e-124	96.61	RING-H2 finger protein ATL52 [Cucumis sativus]	[more]
KAE8648538.1	1.32e-114	96.49	hypothetical protein Csa_008705 [Cucumis sativus]	[more]
XP_038889238.1	7.77e-109	88.30	probable E3 ubiquitin-protein ligase ATL44 [Benincasa hispida]	[more]
XP_022939139.1	2.12e-99	78.61	RING-H2 finger protein ATL52-like [Cucurbita moschata] >KAG7016242.1 RING-H2 fin...	[more]

BLAST of IVF0019734 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	9.4e-18	35.46	RING/U-box superfamily protein	[more]
AT3G03550.1	1.0e-16	34.01	RING/U-box superfamily protein	[more]
AT2G46160.1	5.2e-16	31.58	RING/U-box superfamily protein	[more]
AT5G43420.1	1.5e-15	37.63	RING/U-box superfamily protein	[more]
AT1G04360.1	3.4e-15	30.43	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 104..145 e-value: 2.6E-6 score: 37.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 103..146 e-value: 1.0E-12 score: 48.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 104..146 score: 12.386007
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 57..152 e-value: 3.0E-21 score: 76.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..66
None	No IPR available	PANTHER	PTHR45676:SF43	RING-H2 FINGER PROTEIN ATL52-LIKE	coord: 10..159
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 103..146 e-value: 1.38515E-16 score: 67.7203
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 98..151
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 10..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019734.1	IVF0019734.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane