IVF0019716 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGAATATTTACTCACAATTCAAAAAATGAGCTTGAAAGATGTACTGGCAGTTCCAAATGTGAACATTCAACTAAGTAAAAGAATGGACGTCCAAGAAGAAGAGAAAAGGGCAATGGAAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCAACCTTGACGTTTCAAGGCGCGATCAATCCTCCCGGAGGGACTTGGCAACAAGACCAAGAATTGACTAGTTGTAGATGGAAATAAGGACCAGCTCATATGGAAATTCAAGATGTAGGAACTACAATAATGACATGCAAGCTCTCCAAATCTACACAAGTTATTTCATATCAAATTCAATATCATTCTTTGCATTAGTCGGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGGAAAACAAGATTTTTTGTTGGTTGTTGACAGTAGTCATGACTATCGTCGTTGTATTCTTAACATTTGCATATATAGATGGAATGACAATAGTTTGTAAGAATAAAACTGCTCAAAGTTACTTATTGGATTTGCTTCATGTTTGGTATGGGTTGGTAGTTCTTTGTTGCATTATATTTCCCTTTTTCATTTGGTTGCTCAAAAAGTTTTTTCGTGTATTGGTCGCCTCTGGATATATAAATTAA ATGTTGGAATATTTACTCACAATTCAAAAAATGAGCTTGAAAGATGTACTGGCAGTTCCAAATGTGAACATTCAACTAAGTAAAAGAATGGACGTCCAAGAAGAAGAGAAAAGGGCAATGGAAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCAACCTTGACGTTTCAAGGCGCGATCAATCCTCCCGGAGGGACTTGGCAACAAGACCAAGAATTGACTAGTTCTCTCCAAATCTACACAAGTTATTTCATATCAAATTCAATATCATTCTTTGCATTAGTCGGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGGAAAACAAGATTTTTTGTTGGTTGTTGACAGTAGTCATGACTATCGTCGTTGTATTCTTAACATTTGCATATATAGATGGAATGACAATAGTTTGTAAGAATAAAACTGCTCAAAGTTACTTATTGGATTTGCTTCATGTTTGGTATGGGTTGGTAGTTCTTTGTTGCATTATATTTCCCTTTTTCATTTGGTTGCTCAAAAAGTTTTTTCGTGTATTGGTCGCCTCTGGATATATAAATTAA ATGTTGGAATATTTACTCACAATTCAAAAAATGAGCTTGAAAGATGTACTGGCAGTTCCAAATGTGAACATTCAACTAAGTAAAAGAATGGACGTCCAAGAAGAAGAGAAAAGGGCAATGGAAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCAACCTTGACGTTTCAAGGCGCGATCAATCCTCCCGGAGGGACTTGGCAACAAGACCAAGAATTGACTAGTTCTCTCCAAATCTACACAAGTTATTTCATATCAAATTCAATATCATTCTTTGCATTAGTCGGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGGAAAACAAGATTTTTTGTTGGTTGTTGACAGTAGTCATGACTATCGTCGTTGTATTCTTAACATTTGCATATATAGATGGAATGACAATAGTTTGTAAGAATAAAACTGCTCAAAGTTACTTATTGGATTTGCTTCATGTTTGGTATGGGTTGGTAGTTCTTTGTTGCATTATATTTCCCTTTTTCATTTGGTTGCTCAAAAAGTTTTTTCGTGTATTGGTCGCCTCTGGATATATAAATTAA MLEYLLTIQKMSLKDVLAVPNVNIQLSKRMDVQEEEKRAMENLEEESKIQRGWLQEVQGTLMLVATLTFQGAINPPGGTWQQDQELTSSLQIYTSYFISNSISFFALVGVILLIVSGFPLENKIFCWLLTVVMTIVVVFLTFAYIDGMTIVCKNKTAQSYLLDLLHVWYGLVVLCCIIFPFFIWLLKKFFRVLVASGYIN Homology
BLAST of IVF0019716 vs. ExPASy TrEMBL
Match: A0A0A0LGA6 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G846570 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.5e-59 Identity = 146/231 (63.20%), Postives = 162/231 (70.13%), Query Frame = 0
BLAST of IVF0019716 vs. ExPASy TrEMBL
Match: A0A6J1GYJ8 (uncharacterized protein LOC111458021 OS=Cucurbita moschata OX=3662 GN=LOC111458021 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 4.1e-33 Identity = 94/202 (46.53%), Postives = 120/202 (59.41%), Query Frame = 0
BLAST of IVF0019716 vs. ExPASy TrEMBL
Match: A0A1S4E4H6 (ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC103502000 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.6e-32 Identity = 100/178 (56.18%), Postives = 114/178 (64.04%), Query Frame = 0
BLAST of IVF0019716 vs. ExPASy TrEMBL
Match: A0A5A7UTG8 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00400 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.0e-27 Identity = 94/187 (50.27%), Postives = 115/187 (61.50%), Query Frame = 0
BLAST of IVF0019716 vs. ExPASy TrEMBL
Match: A0A6J1IEM9 (uncharacterized protein LOC111472564 OS=Cucurbita maxima OX=3661 GN=LOC111472564 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.3e-18 Identity = 68/187 (36.36%), Postives = 100/187 (53.48%), Query Frame = 0
BLAST of IVF0019716 vs. NCBI nr
Match: KAE8651283.1 (hypothetical protein Csa_001787 [Cucumis sativus]) HSP 1 Score: 245 bits (625), Expect = 5.50e-76 Identity = 155/245 (63.27%), Postives = 171/245 (69.80%), Query Frame = 0
BLAST of IVF0019716 vs. NCBI nr
Match: XP_004141215.3 (ankyrin repeat-containing protein ITN1 [Cucumis sativus]) HSP 1 Score: 209 bits (533), Expect = 3.14e-62 Identity = 134/214 (62.62%), Postives = 148/214 (69.16%), Query Frame = 0
BLAST of IVF0019716 vs. NCBI nr
Match: KAG6581824.1 (hypothetical protein SDJN03_21826, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155 bits (393), Expect = 9.28e-43 Identity = 95/171 (55.56%), Postives = 113/171 (66.08%), Query Frame = 0
BLAST of IVF0019716 vs. NCBI nr
Match: XP_023526884.1 (uncharacterized protein LOC111790252 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 150 bits (379), Expect = 6.42e-41 Identity = 92/176 (52.27%), Postives = 112/176 (63.64%), Query Frame = 0
BLAST of IVF0019716 vs. NCBI nr
Match: XP_022956269.1 (uncharacterized protein LOC111458021 [Cucurbita moschata]) HSP 1 Score: 150 bits (378), Expect = 9.06e-41 Identity = 92/175 (52.57%), Postives = 112/175 (64.00%), Query Frame = 0
BLAST of IVF0019716 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 3.4e-08 Identity = 50/179 (27.93%), Postives = 87/179 (48.60%), Query Frame = 0
BLAST of IVF0019716 vs. TAIR 10
Match: AT1G10340.1 (Ankyrin repeat family protein ) HSP 1 Score: 48.5 bits (114), Expect = 7.2e-06 Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 0
BLAST of IVF0019716 vs. TAIR 10
Match: AT1G10340.2 (Ankyrin repeat family protein ) HSP 1 Score: 48.5 bits (114), Expect = 7.2e-06 Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 0
BLAST of IVF0019716 vs. TAIR 10
Match: AT4G13266.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 7.2e-06 Identity = 43/170 (25.29%), Postives = 75/170 (44.12%), Query Frame = 0
BLAST of IVF0019716 vs. TAIR 10
Match: AT2G24600.3 (Ankyrin repeat family protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04 Identity = 36/120 (30.00%), Postives = 65/120 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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