IVF0019627 (gene) Melon (IVF77) v1

Overview


Name	IVF0019627
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr08: 11424262 .. 11430222 (+)
RNA-Seq Expression	IVF0019627
Synteny	IVF0019627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACAAGTGGAGGGGAAAGGTTCGGAAAATGGAAGAGATGATTATAGGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTACTTCATTGTTGGTAATTATAATCTTTAACGAACTTTCCTGTTTTGTTTTGCTTTTGCTTTTGTCCATCTTCTTCTAGCCTCCACCCCTTCAAGCTCTTCTTTTAAAATTACGAGTTATGAATTCAGTAAAGAAGATACCCTTTACAGGAAAAATCAAAGAAAAAAAAATAGTTTTTGAAAGAATTAATATCAAGAAGTCCTTGGTCGAATATCTCATATACATAACATGCAGCAACATAATCCCTTCATAAAATGCATTGACATATAGAAACTACCTTGTTTGAAACCTAGAATAAATTTATGGAGAAATACAAGGATGGAGGATTTTTGTTTGTAAGAAAAAATAATACAAACAAAATAATAATACTTAAGCTAATTTTATATTTTCATCGAGGCCAAGATTCAATATCATGATAAATGAAAGATTACTTCCAAGTAATTTAACTTAATGAAATGCAATGGTAACGACATTTTGAAACTTTTATTTCTAAGAGAAAAATGAAAAGCATTGATGGCCCAAACTTTTCAACATCTCATGCGATTGGATTCCTCCATTTCAAGGAAGAAGAGACAATTAAGAGATTTTCTGTTAAAGAATTTTCTTTCCCTTTTTCGTTTAACAAAGATTGGCAGGCGCTGGGGAGTCTTTCGGTTCGAAATTCATCCAACCCCATTTGACTAGTAGTTTTTTTTTTTTTAAAAAAAAAAAGTAAAAGAAAGTCAGATGAGACAAATTAATAAAAAAATTAGGTCCCTTGACCTTCTCAACAAGATATCATAAAAGAAAATAATGAGCGAGAGATTGTAAATTGAAATGGTTTCAATTAAAGAATTGGTGGAAAGTTTTGTAATTATCTTCGTATAGAGTGGGCTGATATCTTGTAACTCGCATTCTTTCAGTAAAATATTTATTATTGAAAAGAAGGATTATTTCTACCAAACTGGATAATTACACAGGGTTTACACAACTTATAACGAATATAGTGAAGTGCTTTGAATACGTCGAAAGAGAATGAGAATTGTACTTACCAAAAATTGTCTAGCATCTGGCCAGGCTGATCTATTAAATCTTTTAACAGCAATTCATCCCTGGTTGTCAAGCTTTTTCTTGTAAACCACATTGGGAGCCTTTTCCCCATGTTCAGATACTATATTTTCAACAGCAAATCCAAACGTGGCCGTTCTTAATTGATCTATGGTGAACTTGCGAAATGTAGGCAGATCACACTCACTCTTCCCTATACTTTCTACACAGGAAAAAAGAACACGAGACATAAGCATTAGAATCCCCAAGAAGCTATAATAAAAACAAAATTATTACCATTATTTGGAACACGAGCAACTGACTTGGTTTTCCTCTGAAGCAACACAATCTGAGAACTTCTATCACTTGCAACTCATCTTGATCACCAGATTTAATTAAAGACGCAATGATTCCAAAGTTTTAGATCATACAGTTGCACTAAGAGAACCTGTTATTGAACTTAGAACCCATTACAAAATTAGAAATGGACATAGCATAGCATGACTGTTAAGAAAGTGCTTTAGGATTGAAACATGCTCATGTGTGTTTATCTTTGTTAAGTTAATTTAGTCCAAGTTTGTTCCTATTTCTTAGGAATTAGTCATTCATGATTTGTAATCATGGAGAAAGTCTAGGGTCATGTTGATTAGTGGAGAAAGTTTAGGGTCATGATGTTAGTGGAGAAAGTTTAGGGTCATGATGTTAGTGGGTAGTTATTTTTAAGACTTTAAATACTGTATTTTTCTTTGAATGTAATTGAAATGAATTTGTCTTCAATTTGCCATTGCAATATTTATTTTTACTCTAGAAAATAACAATTGGTATCAGAGCTCTCTTCTTAAGGGATCTGTGAGTGTGAGTTGTTGTGTCATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAAATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTAAAGGTACAAAACATATACAAGATGTTCTTTTTGTACCTGACATTAACCAAAATTTGTTGAGTGTGGGTCAACTTATTGAAAAAGGTTTGAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAACAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGGAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGCAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAGCCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCACACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGATAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGTTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTCCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGTTCAAGTTGCAGACATATTAACTAAACCGTTGCCTACTTGCAAGTTCGAGTTTCTAAGGTCAAAACTTGGTGTTTGCAACTCCTAA

mRNA sequence

ATGCCACAAGTGGAGGGGAAAGGTTCGGAAAATGGAAGAGATGATTATAGGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTACTTCATTGTTGAAAATAACAATTGGTATCAGAGCTCTCTTCTTAAGGGATCTGTGAGTGTGAGTTGTTGTGTCATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAAATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTAAAGGTACAAAACATATACAAGATGTTCTTTTTGTACCTGACATTAACCAAAATTTGTTGAGTGTGGGTCAACTTATTGAAAAAGGTTTGAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAACAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGGAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGCAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAGCCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCACACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGATAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGTTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTCCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGTTCAAGTTGCAGACATATTAACTAAACCGTTGCCTACTTGCAAGTTCGAGTTTCTAAGGTCAAAACTTGGTGTTTGCAACTCCTAA

Coding sequence (CDS)

ATGCCACAAGTGGAGGGGAAAGGTTCGGAAAATGGAAGAGATGATTATAGGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTACTTCATTGTTGAAAATAACAATTGGTATCAGAGCTCTCTTCTTAAGGGATCTGTGAGTGTGAGTTGTTGTGTCATGGACGCCATAACAAGTTCTAGTTTCACTTCAATTTCTCCATTGATATTTGATGGAGACAACTACCAAGTTTGGGCAGTTCGTATGGAAGCTTATATGGAAGCTTTGGATATTTGGGAAGCAGTGGAAGAGGATTATGAAATTCCTGCTCTTCCAGACAATCCTACCATGGCACAAATCAAAGCGCAAAAGGAGAAGAAGACAAAGAAATCCAAGGCAAAGGCATGTCTGTTTGCTGCAGTCTCATCTACTATCTTCACTAGAATTATGACTCTGAGATCAGCATATGAGATATGGAATTATCTCAAGTCAGAATATGAGGGAGATGAAAGAATCAAAGGAATGCGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGAAGGAAACAGAATCAATTAAAGAGTATTCTGTTAGGTTATTGGACATTGCAAACCAAATCAAATTACTTGGTTCTGTGTTCAAGGACTCAAGAATTGTAGAAAAAATTCTTGTATCAGTGCCTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAATACCAAAGATTTGACTCAAATCACTCTTGCAGAGATACTCAATGCTTTGCAAGCGCAGGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACTAGAGAATCTTCAACTTACAACAAAGCAGGAGTCAAGAAGGGATCCTATCCTCCCTGTTCACATTGCAATAAACAGGGTCATCCTCCTTTTAAATGCTGGAGGAGACCAAACGCCAAGTGCACCAAATGTAACCAAATGGGGCATGAAGCTGTAATTTGCAGGAACAATAATCAACAACAAGGTGTAGAGGCCAAAATTGCTTATCAGGAGGAGGAGGAGGAGGATCAATTGTTTGTGGCAACATGCTTCGTGGGTGGTGAGTCAAATGAAAGCTGGCTGATTGACAGTGGATGTACCAACCATATGACTCATGACAAGGAGTTGTTTAAAGATCTGAAGCCAACAAATATCACCAAAGTCAGAATTGGCAATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCCAGTTGTAAAGGTACAAAACATATACAAGATGTTCTTTTTGTACCTGACATTAACCAAAATTTGTTGAGTGTGGGTCAACTTATTGAAAAAGGTTTGAAAGTTACTTTTGAAAATGAATATTGCTTGATTAAGGATGCAACAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAAAAAGTTTTTCACTTAATCCTTTAGAGGAGGAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAGCTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTGCTACAACTAACGGAGTTGGCACTTGATTTTCCCAAGCTTAGTGAAGAAATCTCAAGCTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATCTTGGAGAGCCACTCAAAAATTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGCAGTCTCTATTATATTGCTTTTATTGATGACTTCACCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCATGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTAAGGTCTGACAATGGGAAGGAGTATGTTTCGGCAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGTTAGTGAGAGGAGAAATAGATACATCATGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAGCTGTATTTCTTCAAAATAGGCTTCCCACAAAAGCATTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCATTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTTTCACTCATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCACCGGGTGTCTTTATAGGCTATAGTTCTATCAGCAAAGCCTATAAAATTTTCCAGCCACAAACTGGAAAGATTGTCGTGAGCAGGGATGTTCACTTCGAGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCACACCTTGGAAAAGATGAAATTCAAGTTTTTTGATTCAAGCATTGAAGAGGAAGATGATAGGCAGAATGAAATAGTAGATGATGCTTCCGTGAGAGGAACAAGGTTGCTTTCTGATATTTATGAAAGGTGCAATGTTGCTGTGTGTGAACCTGCAAACTATGCAGAAGCAAAGAAAGATCAAAGGTGGATAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGATCCTTGTTGACAGACCTCAAGATAGGAAGGTAATTGGAGTTAAATGGGTGTTTAGAACCAAGCTTAATGCTGATGGCTCGATTAACAAGCACAAAGCCAGGCTTGTGGTTAAAGGGTATGCTCAAATCTTTGGTGTTGATTACTCTGATACTTTTGCTCCTGTTGCTAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGGTGGAAATTGTATCAGTTGGATGTCAAATCAGTTTTTTTGAATGGTGTCTTACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAAGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGAGCTTGGTATAGCAAAATTGATGAACATTTACTGAGCTTGGGATTTTTGAAAAGTCTATCAGAATCAACCTTATATGTTAAGCACAATGGTACTAACATTCTTATTGTTTCACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATGATGAAGATGTTTGAAATGACAGATCTCGGGCTCATGTCCTACTTCCTTGGCATAGAGATCAAGCAAGGGCAAGGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCTGTAAGCACTCCAATGAATCAAAAAGAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTCACAGCAACAAGACCTGATATTTTGAATGCTGTGAGTATTTTGTCTCGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATACGATATGTCAAAGGCACAAGTGATTTTGGTGTTAAGTTCACTAGGGGCAAGGAGTTCAAACTGATTGGTTTTTCTGATAGTGATTGGGGAGGTTCCATTGATGATATGAGAAGCACTTTAGGTTACTGTTTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCCCAATCCACTGCTGAAGCAGAATTTATTGCTGCAACAGCTACTGCCAATCAAGCTTTATGGCTGAGGAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCGGCTATTGCTATTTCTCATAATCCTGTGTTTTATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTTTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGCAAAACAGAAGTTCAAGTTGCAGACATATTAACTAAACCGTTGCCTACTTGCAAGTTCGAGTTTCTAAGGTCAAAACTTGGTGTTTGCAACTCCTAA

Protein sequence

MPQVEGKGSENGRDDYREDGTVSLKGLPVLRSKTGRWRACYFIVENNNWYQSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENEYCLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFLRSKLGVCNS

Homology

[Close]

BLAST of IVF0019627 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.1e-179
Identity = 433/1371 (31.58%), Postives = 688/1371 (50.18%), Query Frame = 0


Query: 82   FDGDN-YQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKA 141
            F+GDN +  W  RM   +    + + ++ D + P        A +           +A +
Sbjct: 11   FNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADL---------DERAAS 70

Query: 142  CLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESI 201
             +   +S  +   I+   +A  IW  L+S Y           L L ++     M E  + 
Sbjct: 71   AIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTL---TNKLYLKKQLYALHMSEGTNF 130

Query: 202  KEYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEIL 261
              +      +  Q+  LG   ++      +L S+P  ++   + + + K  T I L ++ 
Sbjct: 131  LSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGK--TTIELKDVT 190

Query: 262  NALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVK-- 321
            +AL   E+ R            P    + +    + + ++      R S+ Y ++G +  
Sbjct: 191  SALLLNEKMRKK----------PENQGQALITEGRGRSYQ------RSSNNYGRSGARGK 250

Query: 322  -----KGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHE-----AVICRNNNQQQGV 381
                 K     C +CN+ GH    C   PN +  K    G +     A + +NN+     
Sbjct: 251  SKNRSKSRVRNCYNCNQPGHFKRDC---PNPRKGKGETSGQKNDDNTAAMVQNNDN---- 310

Query: 382  EAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITKVRI 441
               + +  EEEE       C         W++D+  ++H T  ++LF      +   V++
Sbjct: 311  --VVLFINEEEE-------CMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKM 370

Query: 442  GNGDYISVKGKGTIAIASCKG-TKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENE--- 501
            GN  Y  + G G I I +  G T  ++DV  VPD+  NL+S   L   G +  F N+   
Sbjct: 371  GNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWR 430

Query: 502  -----YCLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQG 561
                   + K      +++   +     LN  ++E SV         LWHKR+GH   +G
Sbjct: 431  LTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISV--------DLWHKRMGHMSEKG 490

Query: 562  LLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPS 621
            L  L + +L        +  C  C FGKQ+R SF  SS R    L L+++DV GP    S
Sbjct: 491  LQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIES 550

Query: 622  LKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYV 681
            + G+ Y++ FIDD +R  W++ LK K +V  VF KF A VE E+G K++ +RSDNG EY 
Sbjct: 551  MGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYT 610

Query: 682  SAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANT 741
            S EF+++C   GI+H+ T P TPQ NGV+ER NR I+E  R ML    LPK FW EA  T
Sbjct: 611  SREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQT 670

Query: 742  AVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVF 801
            A +L NR P+  L  + P   W   + S   LKVFGC  F HVP+ +R KLD ++ P +F
Sbjct: 671  ACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIF 730

Query: 802  IGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKFKFFDSS--- 861
            IGY      Y+++ P   K++ SRDV F E E     D  +K        F    S+   
Sbjct: 731  IGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNN 790

Query: 862  ----------IEEEDDRQNEIVD-----DASVRGT-------------------RLLSDI 921
                      + E+ ++  E+++     D  V                      R+ S  
Sbjct: 791  PTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRR 850

Query: 922  YERCNVAVCEPANYAEAKKD-------QRWIAAMEEELSMIEKNKTWILVDRPQDRKVIG 981
            Y      +       E+ K+        + + AM+EE+  ++KN T+ LV+ P+ ++ + 
Sbjct: 851  YPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLK 910

Query: 982  VKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGW 1041
             KWVF+ K + D  + ++KARLVVKG+ Q  G+D+ + F+PV +M +IR + ++AA    
Sbjct: 911  CKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDL 970

Query: 1042 KLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDE 1101
            ++ QLDVK+ FL+G L+EEIY+EQPEG E  G+++ V  L K+LYGLKQAPR WY K D 
Sbjct: 971  EVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDS 1030

Query: 1102 HLLSLGFLKSLSESTLYVKH-NGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMT 1161
             + S  +LK+ S+  +Y K  +  N +I+ LYVDD+L+ G +   I   K ++ K F+M 
Sbjct: 1031 FMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMK 1090

Query: 1162 DLGLMSYFLGIEI--KQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDG 1221
            DLG     LG++I  ++   ++++ Q+KY + +L++F M   K VSTP+    KL K+  
Sbjct: 1091 DLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMC 1150

Query: 1222 ADKVDEG------YFRSLIGCLMY-LTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1281
               V+E        + S +G LMY +  TRPDI +AV ++SRF+    + H +A K ++R
Sbjct: 1151 PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILR 1210

Query: 1282 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1341
            Y++GT+   + F  G +  L G++D+D  G ID+ +S+ GY FT S G  SW SK Q+ V
Sbjct: 1211 YLRGTTGDCLCF-GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCV 1270

Query: 1342 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1377
            A ST EAE+IAAT T  + +WL++ L +L L QK+   +  D+++AI +S N +++ +TK
Sbjct: 1271 ALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV-VYCDSQSAIDLSKNSMYHARTK 1325

[Close]

BLAST of IVF0019627 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 7.6e-160
Identity = 423/1455 (29.07%), Postives = 684/1455 (47.01%), Query Frame = 0


Query: 86   NYQVWAVRMEAYMEALDIWEAVEEDYEI-PALPDNPTMAQIKAQKEKKTKKSK-AKACLF 145
            NY +W+ ++ A  +  ++   ++    + PA        ++     +  ++ K   + + 
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89

Query: 146  AAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEY 205
             A+S ++   +    +A +IW  L+  Y         ++   ++++     K T++I +Y
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQW----TKGTKTIDDY 149

Query: 206  SVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNAL 265
               L+   +Q+ LLG        VE++L ++PE+++  I  +   KD T  TL EI   L
Sbjct: 150  MQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIA-AKD-TPPTLTEIHERL 209

Query: 266  QAQEQRRAMRQEGAV--EGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGS 325
               E +        V    A    H      N      + N+   R ++  +K       
Sbjct: 210  LNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSK------- 269

Query: 326  YPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEED 385
              P    +   HP     +    KC  C   GH A  C   +Q Q   + +  Q+     
Sbjct: 270  --PWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC---SQLQHFLSSVNSQQPPSPF 329

Query: 386  QLFV--ATCFVGGE-SNESWLIDSGCTNHMTHDKELFKDLKP-TNITKVRIGNGDYISVK 445
              +   A   +G   S+ +WL+DSG T+H+T D       +P T    V + +G  I + 
Sbjct: 330  TPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPIS 389

Query: 446  GKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIE-KGLKVTFENEYCLIKDA-TNQD 505
              G+ ++++     ++ ++L+VP+I++NL+SV +L    G+ V F      +KD  T   
Sbjct: 390  HTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVP 449

Query: 506  IFKVKMKGKSFSLNPLEEEQ--SVFALKEDET--QLWHKRVGHYHHQGLLQ-LTELALDF 565
            + + K K + +   P+   Q  S+FA    +     WH R+GH     L   ++  +L  
Sbjct: 450  LLQGKTKDELYEW-PIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSV 509

Query: 566  PKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLK--GSLYYIA 625
               S +  SC  C   K N+  F +S+  +T+ L+ I++DV     +P L      YY+ 
Sbjct: 510  LNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDV---WSSPILSHDNYRYYVI 569

Query: 626  FIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDKFCE 685
            F+D FTR  W++ LK KS+V   F  FK  +EN    +I    SDNG E+V+    ++  
Sbjct: 570  FVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LWEYFS 629

Query: 686  DSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNRLP 745
              GI H  + P+TP+ NG+SER++R+I+E    +L   S+PK +W  A   AV+L NRLP
Sbjct: 630  QHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLP 689

Query: 746  TKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSISKA 805
            T  L+ ++PF+  +G  P+   L+VFGC C+  +    + KLD ++   VF+GYS    A
Sbjct: 690  TPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSA 749

Query: 806  YKIFQPQTGKIVVSRDVHFEED---------------EE-------WN------------ 865
            Y     QT ++ +SR V F+E+               E+       W+            
Sbjct: 750  YLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVL 809

Query: 866  ---------------------FDDAEKKGHTLEKMKFKFFDSSIEEEDDRQN-------- 925
                                 F +++     L+      F SS E    RQN        
Sbjct: 810  PAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQP 869

Query: 926  ------------------------------------------------------------ 985
                                                                        
Sbjct: 870  TQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSIL 929

Query: 986  --------EIVD-------DASVRGTRLLSDIYE---RCNVAV-----CEPANYAEAKKD 1045
                    +IV+       +    GTR  + I +   + ++AV      EP    +A KD
Sbjct: 930  IHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKD 989

Query: 1046 QRWIAAMEEELSMIEKNKTWILVDRPQDR-KVIGVKWVFRTKLNADGSINKHKARLVVKG 1105
            +RW  AM  E++    N TW LV  P     ++G +W+F  K N+DGS+N++KARLV KG
Sbjct: 990  ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKG 1049

Query: 1106 YAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPE 1165
            Y Q  G+DY++TF+PV +  +IR++  +A  + W + QLDV + FL G L +++Y+ QP 
Sbjct: 1050 YNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPP 1109

Query: 1166 GCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNIL 1225
            G   +   N V  L+KALYGLKQAPRAWY ++  +LL++GF+ S+S+++L+V   G +I+
Sbjct: 1110 GFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIV 1169

Query: 1226 IVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKY 1285
             + +YVDD+L+TGN+   + N    + + F + D   + YFLGIE K+    + + Q++Y
Sbjct: 1170 YMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRY 1229

Query: 1286 AKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNA 1345
              ++L +  M   K V+TPM    KL    G    D   +R ++G L YL  TRPDI  A
Sbjct: 1230 ILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYA 1289

Query: 1346 VSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMR 1377
            V+ LS+FMH  +E HL+A KR++RY+ GT + G+   +G    L  +SD+DW G  DD  
Sbjct: 1290 VNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYV 1349

[Close]

BLAST of IVF0019627 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 559.7 bits (1441), Expect = 9.3e-158
Identity = 422/1451 (29.08%), Postives = 690/1451 (47.55%), Query Frame = 0


Query: 82   FDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKAC 141
            FDG+ Y +W  R+ A +   D+ + V+       +P+    +  KA++        AK+ 
Sbjct: 11   FDGEKYAIWKFRIRALLAEQDVLKVVD-----GLMPNEVDDSWKKAER-------CAKST 70

Query: 142  LFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIK 201
            +   +S +      +  +A +I   L + Y   ER      L L +     K+    S+ 
Sbjct: 71   IIEYLSDSFLNFATSDITARQILENLDAVY---ERKSLASQLALRKRLLSLKLSSEMSLL 130

Query: 202  EYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILN 261
             +     ++ +++   G+  ++   +  +L+++P  ++  I+A+E   +   +TLA + N
Sbjct: 131  SHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSE-ENLTLAFVKN 190

Query: 262  ALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGS 321
             L  QE +         +  + A  H N  NN  K    KN+++  +      +  K   
Sbjct: 191  RLLDQEIKIKNDHNDTSKKVMNAIVHNN--NNTYKNNLFKNRVTKPKKIFKGNSKYK--- 250

Query: 322  YPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQQGVEAK------IAYQ 381
               C HC ++GH    C+              H   I  N N++   + +      IA+ 
Sbjct: 251  -VKCHHCGREGHIKKDCF--------------HYKRILNNKNKENEKQVQTATSHGIAFM 310

Query: 382  EEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKD----LKPTNITKVRIGNG 441
             +E  +   +  C         +++DSG ++H+ +D+ L+ D    + P  I   +   G
Sbjct: 311  VKEVNNTSVMDNC--------GFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAK--QG 370

Query: 442  DYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENEYCLIKDA 501
            ++I    +G + + +      ++DVLF  +   NL+SV +L E G+ + F+     I   
Sbjct: 371  EFIYATKRGIVRLRNDHEIT-LEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTI--- 430

Query: 502  TNQDIFKVKMKGKSFSLNPLE-EEQSVFALKEDETQLWHKRVGHYHHQGLLQL------- 561
            +   +  VK  G   ++  +  +  S+ A  ++  +LWH+R GH     LL++       
Sbjct: 431  SKNGLMVVKNSGMLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFS 490

Query: 562  TELALDFPKLSEEISSCKACHFGKQNRKSFP--KSSWRATQKLQLIHTDVAGPQRTPSLK 621
             +  L+  +LS EI  C+ C  GKQ R  F   K      + L ++H+DV GP    +L 
Sbjct: 491  DQSLLNNLELSCEI--CEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLD 550

Query: 622  GSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSA 681
               Y++ F+D FT  C  + +K+KS+V  +F  F A+ E     K+  +  DNG+EY+S 
Sbjct: 551  DKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSN 610

Query: 682  EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAV 741
            E  +FC   GI + LT P+TPQ NGVSER  R I E  R M+    L K FW EA  TA 
Sbjct: 611  EMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTAT 670

Query: 742  FLQNRLPTKAL--KEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVF 801
            +L NR+P++AL    KTP+E W+  KP LK L+VFG   + H+ ++K+ K D ++   +F
Sbjct: 671  YLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI-KNKQGKFDDKSFKSIF 730

Query: 802  IGYSSISKAYKIFQPQTGKIVVSRD-------------VHFE------------------ 861
            +GY      +K++     K +V+RD             V FE                  
Sbjct: 731  VGYE--PNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPND 790

Query: 862  --------------------------EDEEWNFDDAEKK-------------------GH 921
                                      E E  NF +  +K                     
Sbjct: 791  SRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKD 850

Query: 922  TLEKMKFKFFDSSIEEEDDRQNE-----------------------IVDDASVRGTRLLS 981
            + E  K+   +S   + DD  NE                       I +     G  +++
Sbjct: 851  SKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIIN 910

Query: 982  DIYER---------------CNVAVCE--------PANYAEAK-KDQR--WIAAMEEELS 1041
               ER                N  V          P ++ E + +D +  W  A+  EL+
Sbjct: 911  RRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELN 970

Query: 1042 MIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTF 1101
              + N TW +  RP+++ ++  +WVF  K N  G+  ++KARLV +G+ Q + +DY +TF
Sbjct: 971  AHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETF 1030

Query: 1102 APVARMDTIRLLFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYL 1161
            APVAR+ + R + ++  Q   K++Q+DVK+ FLNG L+EEIY+  P+G     +   V  
Sbjct: 1031 APVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSD--NVCK 1090

Query: 1162 LKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYV--KHNGTNILIVSLYVDDLLV 1221
            L KA+YGLKQA R W+   ++ L    F+ S  +  +Y+  K N    + V LYVDD+++
Sbjct: 1091 LNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVI 1150

Query: 1222 TGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMD 1281
               +   + NFK  +M+ F MTDL  + +F+GI I+  + ++++ Q  Y K+IL KF M+
Sbjct: 1151 ATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNME 1210

Query: 1282 ECKAVSTPMNQK---EKLCKEDGADKVDEGYFRSLIGCLMY-LTATRPDILNAVSILSRF 1341
             C AVSTP+  K   E L  ++  +       RSLIGCLMY +  TRPD+  AV+ILSR+
Sbjct: 1211 NCNAVSTPLPSKINYELLNSDEDCNTP----CRSLIGCLMYIMLCTRPDLTTAVNILSRY 1270

Query: 1342 MHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEF--KLIGFSDSDWGGSIDDMRSTLGY 1377
                +    +  KRV+RY+KGT D  + F +   F  K+IG+ DSDW GS  D +ST GY
Sbjct: 1271 SSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGY 1330

[Close]

BLAST of IVF0019627 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.8e-151
Identity = 413/1464 (28.21%), Postives = 660/1464 (45.08%), Query Frame = 0


Query: 86   NYQVWAVRMEAYMEALDIWEAVEEDYEI-PALPDNPTMAQIKAQKEKKTKKSK-AKACLF 145
            NY +W+ ++ A  +  ++   ++    + PA      + ++     +  ++ K   + + 
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89

Query: 146  AAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEY 205
             A+S ++   +    +A +IW  L+  Y  +     +  L  I  F+             
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIY-ANPSYGHVTQLRFITRFD------------- 149

Query: 206  SVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNAL 265
                     Q+ LLG        VE++L ++P+ ++  I  +   KD T  +L EI   L
Sbjct: 150  ---------QLALLGKPMDHDEQVERVLENLPDDYKPVIDQIA-AKD-TPPSLTEIHERL 209

Query: 266  QAQEQR-RAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSY 325
              +E +  A+     V        H N   N       +NQ +  ++  YN    +  S+
Sbjct: 210  INRESKLLALNSAEVVPITANVVTHRNTNTN-------RNQNNRGDNRNYNNNNNRSNSW 269

Query: 326  PPCSHCNKQGHPPFKCWRRPN---AKCTKCNQMGHEAVIC-------RNNNQQQGVEAKI 385
             P S  ++  +      R+P     +C  C+  GH A  C          NQQQ      
Sbjct: 270  QPSSSGSRSDN------RQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFT 329

Query: 386  AYQEEEEEDQLFVATCFVGGESN-ESWLIDSGCTNHMTHDKELFKDLKP-TNITKVRIGN 445
             +Q          A   V    N  +WL+DSG T+H+T D       +P T    V I +
Sbjct: 330  PWQPR--------ANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIAD 389

Query: 446  GDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG-LKVTFENEYCLIK 505
            G  I +   G+ ++ +   +  +  VL+VP+I++NL+SV +L     + V F      +K
Sbjct: 390  GSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVK 449

Query: 506  DA-TNQDIFKVKMKGKSFSLNPLEEEQ--SVFA--LKEDETQLWHKRVGHYHHQGLLQ-L 565
            D  T   + + K K + +   P+   Q  S+FA    +     WH R+GH     L   +
Sbjct: 450  DLNTGVPLLQGKTKDELYEW-PIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVI 509

Query: 566  TELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGS 625
            +  +L     S ++ SC  C   K ++  F  S+  +++ L+ I++DV       S+   
Sbjct: 510  SNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDV-WSSPILSIDNY 569

Query: 626  LYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEF 685
             YY+ F+D FTR  W++ LK KS+V   F  FK+ VEN    +I  + SDNG E+V    
Sbjct: 570  RYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR- 629

Query: 686  DKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFL 745
              +    GI H  + P+TP+ NG+SER++R+I+EM   +L   S+PK +W  A + AV+L
Sbjct: 630  -DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYL 689

Query: 746  QNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYS 805
             NRLPT  L+ ++PF+  +G  P+ + LKVFGC C+  +    R KL+ ++    F+GYS
Sbjct: 690  INRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYS 749

Query: 806  SISKAYKIFQPQTGKIVVSRDVHFEE--------------DEEWNFDDAEK-KGH----- 865
                AY      TG++  SR V F+E               +E   D A     H     
Sbjct: 750  LTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPT 809

Query: 866  -----------------------------TLEKMKFKFFDSSIEE--------------- 925
                                         T +        SSI                 
Sbjct: 810  TPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQ 869

Query: 926  ----------------------------EDDRQNEIVDDASV------------------ 985
                                            QN  +  + +                  
Sbjct: 870  PTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSP 929

Query: 986  --------------------------------RGTRLLSDI--------YERCNVAVCEP 1045
                                              TR    I        Y     A  EP
Sbjct: 930  SSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEP 989

Query: 1046 ANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDR-KVIGVKWVFRTKLNADGSINK 1105
                +A KD RW  AM  E++    N TW LV  P     ++G +W+F  K N+DGS+N+
Sbjct: 990  RTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNR 1049

Query: 1106 HKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSVFLNGVLQ 1165
            +KARLV KGY Q  G+DY++TF+PV +  +IR++  +A  + W + QLDV + FL G L 
Sbjct: 1050 YKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLT 1109

Query: 1166 EEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLY 1225
            +E+Y+ QP G   +   + V  L+KA+YGLKQAPRAWY ++  +LL++GF+ S+S+++L+
Sbjct: 1110 DEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLF 1169

Query: 1226 VKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQG 1285
            V   G +I+ + +YVDD+L+TGN+   +++    + + F + +   + YFLGIE K+   
Sbjct: 1170 VLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQ 1229

Query: 1286 EVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLT 1345
             + + Q++Y  ++L +  M   K V+TPM    KL    G    D   +R ++G L YL 
Sbjct: 1230 GLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLA 1289

Query: 1346 ATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSD 1377
             TRPD+  AV+ LS++MH  ++ H  A KRV+RY+ GT D G+   +G    L  +SD+D
Sbjct: 1290 FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDAD 1349

[Close]

BLAST of IVF0019627 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-38
Identity = 99/304 (32.57%), Postives = 160/304 (52.63%), Query Frame = 0


Query: 980  LDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLS 1039
            +DV + FLN  + E IYV+QP G   +   + V+ L   +YGLKQAP  W   I+  L  
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 1040 LGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLM 1099
            +GF +   E  LY +      + +++YVDDLLV   +       K E+ K++ M DLG +
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1100 SYFLGIEIKQ-GQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDE 1159
              FLG+ I Q   G++ +  + Y  +   + +++  K   TP+   + L +       D 
Sbjct: 121  DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 1160 GYFRSLIGCLMYLTAT-RPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKF 1219
              ++S++G L++   T RPDI   VS+LSRF+     +HL++A+RV+RY+  T    +K+
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1220 TRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKK-QEIVAQSTAEAEFIA 1279
              G +  L  + D+  G   D   ST GY   L+    +WSSKK + ++   + EAE+I 
Sbjct: 241  RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYIT 300

Query: 1280 ATAT 1281
            A+ T
Sbjct: 301  ASET 304

[Close]

BLAST of IVF0019627 vs. ExPASy TrEMBL
Match: A0A5D3DBU0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00950 PE=4 SV=1)

HSP 1 Score: 2641.3 bits (6845), Expect = 0.0e+00
Identity = 1322/1329 (99.47%), Postives = 1324/1329 (99.62%), Query Frame = 0


Query: 51   QSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED 110
            +SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED
Sbjct: 102  ESSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED 161

Query: 111  YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE 170
            YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE
Sbjct: 162  YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE 221

Query: 171  YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKI 230
            YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQI+LLGSVFKDSRIVEKI
Sbjct: 222  YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKI 281

Query: 231  LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV 290
            LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV
Sbjct: 282  LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV 341

Query: 291  RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN 350
            RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN
Sbjct: 342  RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN 401

Query: 351  QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH 410
            QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH
Sbjct: 402  QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH 461

Query: 411  DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVG 470
            DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVG
Sbjct: 462  DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVG 521

Query: 471  QLIEKGLKVTFENEYCLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHK 530
            QLIEKG KVTFENEYCLIKDA NQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHK
Sbjct: 522  QLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHK 581

Query: 531  RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD 590
            RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD
Sbjct: 582  RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD 641

Query: 591  VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV 650
            VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV
Sbjct: 642  VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV 701

Query: 651  RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK 710
            RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK
Sbjct: 702  RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK 761

Query: 711  KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL 770
            KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL
Sbjct: 762  KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL 821

Query: 771  DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKF 830
            DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKG TLEKMKF
Sbjct: 822  DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKF 881

Query: 831  KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME 890
            KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME
Sbjct: 882  KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME 941

Query: 891  EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY 950
            EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY
Sbjct: 942  EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY 1001

Query: 951  SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERN 1010
            SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQPEGCEKQGERN
Sbjct: 1002 SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERN 1061

Query: 1011 KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL 1070
            KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL
Sbjct: 1062 KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL 1121

Query: 1071 LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK 1130
            LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK
Sbjct: 1122 LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK 1181

Query: 1131 MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH 1190
            MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH
Sbjct: 1182 MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH 1241

Query: 1191 CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL 1250
            CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL
Sbjct: 1242 CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL 1301

Query: 1251 SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA 1310
            SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA
Sbjct: 1302 SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA 1361

Query: 1311 AIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFL 1370
            AIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTE QVADILTKPLPTCKFEFL
Sbjct: 1362 AIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFL 1421

Query: 1371 RSKLGVCNS 1380
            RSKLGVCNS
Sbjct: 1422 RSKLGVCNS 1430

[Close]

BLAST of IVF0019627 vs. ExPASy TrEMBL
Match: A0A5D3BL45 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00490 PE=4 SV=1)

HSP 1 Score: 2627.0 bits (6808), Expect = 0.0e+00
Identity = 1317/1331 (98.95%), Postives = 1320/1331 (99.17%), Query Frame = 0


Query: 44   VENNNWYQ---SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEA 103
            VE N W+    SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEA
Sbjct: 595  VEENLWFSANCSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEA 654

Query: 104  LDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSA 163
            LDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSA
Sbjct: 655  LDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSA 714

Query: 164  YEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIKLLGSV 223
            YEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQI+LLGSV
Sbjct: 715  YEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSV 774

Query: 224  FKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEG 283
            FKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEG
Sbjct: 775  FKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEG 834

Query: 284  ALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWR 343
            ALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWR
Sbjct: 835  ALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWR 894

Query: 344  RPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLI 403
            RPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLI
Sbjct: 895  RPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLI 954

Query: 404  DSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVP 463
            DSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVP
Sbjct: 955  DSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVP 1014

Query: 464  DINQNLLSVGQLIEKGLKVTFENEYCLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFAL 523
            DINQNLLSVGQLIEKG KVTFENEYCLIKDA NQDIFKVKMKGKSFSLNPLEE+QSVFAL
Sbjct: 1015 DINQNLLSVGQLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFAL 1074

Query: 524  KEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRA 583
            KEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRA
Sbjct: 1075 KEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRA 1134

Query: 584  TQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVE 643
            TQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVE
Sbjct: 1135 TQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVE 1194

Query: 644  NESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTR 703
            NESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTR
Sbjct: 1195 NESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTR 1254

Query: 704  CMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFT 763
            CMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFT
Sbjct: 1255 CMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFT 1314

Query: 764  HVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEK 823
            HVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEK
Sbjct: 1315 HVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEK 1374

Query: 824  KGHTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAK 883
            KG TLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAK
Sbjct: 1375 KGQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAK 1434

Query: 884  KDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVK 943
            KDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVK
Sbjct: 1435 KDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVK 1494

Query: 944  GYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQP 1003
            GYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQP
Sbjct: 1495 GYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQP 1554

Query: 1004 EGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNI 1063
            EGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNI
Sbjct: 1555 EGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNI 1614

Query: 1064 LIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKK 1123
            LIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKK
Sbjct: 1615 LIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKK 1674

Query: 1124 YAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN 1183
            YAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN
Sbjct: 1675 YAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN 1734

Query: 1184 AVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDM 1243
            AVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDM
Sbjct: 1735 AVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDM 1794

Query: 1244 RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKK 1303
            RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKK
Sbjct: 1795 RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKK 1854

Query: 1304 STEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEVQVADILTK 1363
            STEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTE QVADILTK
Sbjct: 1855 STEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTK 1914

Query: 1364 PLPTCKFEFLR 1372
            PLPTCKFEFLR
Sbjct: 1915 PLPTCKFEFLR 1925

[Close]

BLAST of IVF0019627 vs. ExPASy TrEMBL
Match: A0A5D3DMJ1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00670 PE=4 SV=1)

HSP 1 Score: 2614.7 bits (6776), Expect = 0.0e+00
Identity = 1308/1314 (99.54%), Postives = 1309/1314 (99.62%), Query Frame = 0


Query: 66   MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 125
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 126  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 185
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 186  IREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISAL 245
            IREFELQKMKETESIKEYSVRLLDIANQI+LLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 246  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 305
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 306  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 365
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 366  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 425
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 426  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENEY 485
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG KVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 486  CLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 545
            CLIKDA NQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 546  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 605
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 606  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 665
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 666  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 725
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 726  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 785
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 786  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKFKFFDSSIEEEDDRQN 845
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKG TLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 846  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 905
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 906  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 965
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 966  LFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1025
            LFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1026 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1085
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1086 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1145
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1146 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1205
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1206 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1265
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1266 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1325
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1326 HFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFLRSKLGVCNS 1380
            HFNIKLFFLREVQKSGEVILVYCKTE QVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of IVF0019627 vs. ExPASy TrEMBL
Match: A0A5A7SMD9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001130 PE=4 SV=1)

HSP 1 Score: 2614.3 bits (6775), Expect = 0.0e+00
Identity = 1307/1314 (99.47%), Postives = 1309/1314 (99.62%), Query Frame = 0


Query: 66   MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 125
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 126  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 185
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 186  IREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISAL 245
            IREFELQKMKETESIKEYSVRLLDIANQI+LLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 246  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 305
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 306  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 365
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 366  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 425
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 426  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENEY 485
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG KVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 486  CLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 545
            CLIKDA NQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 546  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 605
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 606  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 665
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 666  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 725
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 726  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 785
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 786  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKFKFFDSSIEEEDDRQN 845
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKG TLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 846  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 905
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 906  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 965
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 966  LFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1025
            LFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1026 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1085
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1086 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1145
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1146 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1205
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1206 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1265
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1266 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1325
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1326 HFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFLRSKLGVCNS 1380
            HFNIKLFFLREVQKSGEVILVYCKTEVQV DILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEVQVVDILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of IVF0019627 vs. ExPASy TrEMBL
Match: A0A5D3E2V7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00370 PE=4 SV=1)

HSP 1 Score: 2613.2 bits (6772), Expect = 0.0e+00
Identity = 1307/1314 (99.47%), Postives = 1309/1314 (99.62%), Query Frame = 0


Query: 66   MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 125
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 126  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 185
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 186  IREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISAL 245
            IREFELQKMKETESIKEYSVRLLDIANQI+LLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 246  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 305
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 306  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 365
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 366  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 425
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 426  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENEY 485
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG KVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 486  CLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 545
            CLIKDA NQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 546  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 605
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 606  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 665
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 666  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 725
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 726  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 785
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 786  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKFKFFDSSIEEEDDRQN 845
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKG TLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 846  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 905
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 906  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 965
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 966  LFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1025
            LFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1026 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1085
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1086 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1145
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1146 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1205
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1206 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1265
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1266 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1325
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1326 HFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFLRSKLGVCNS 1380
            HFNIKLFFLREVQKSGEVILVYCKTE QVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of IVF0019627 vs. NCBI nr
Match: TYK21117.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2641 bits (6845), Expect = 0.0
Identity = 1322/1329 (99.47%), Postives = 1324/1329 (99.62%), Query Frame = 0


Query: 51   QSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED 110
            +SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED
Sbjct: 102  ESSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEED 161

Query: 111  YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE 170
            YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE
Sbjct: 162  YEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSE 221

Query: 171  YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKI 230
            YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQI+LLGSVFKDSRIVEKI
Sbjct: 222  YEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKI 281

Query: 231  LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV 290
            LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV
Sbjct: 282  LVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENV 341

Query: 291  RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN 350
            RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN
Sbjct: 342  RNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCN 401

Query: 351  QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH 410
            QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH
Sbjct: 402  QMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTH 461

Query: 411  DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVG 470
            DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVG
Sbjct: 462  DKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVG 521

Query: 471  QLIEKGLKVTFENEYCLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHK 530
            QLIEKG KVTFENEYCLIKDA NQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHK
Sbjct: 522  QLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHK 581

Query: 531  RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD 590
            RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD
Sbjct: 582  RVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTD 641

Query: 591  VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV 650
            VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV
Sbjct: 642  VAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMV 701

Query: 651  RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK 710
            RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK
Sbjct: 702  RSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPK 761

Query: 711  KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL 770
            KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL
Sbjct: 762  KFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKL 821

Query: 771  DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKF 830
            DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKG TLEKMKF
Sbjct: 822  DRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKF 881

Query: 831  KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME 890
            KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME
Sbjct: 882  KFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAME 941

Query: 891  EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY 950
            EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY
Sbjct: 942  EELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDY 1001

Query: 951  SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERN 1010
            SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQPEGCEKQGERN
Sbjct: 1002 SDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERN 1061

Query: 1011 KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL 1070
            KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL
Sbjct: 1062 KVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDL 1121

Query: 1071 LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK 1130
            LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK
Sbjct: 1122 LVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFK 1181

Query: 1131 MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH 1190
            MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH
Sbjct: 1182 MDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMH 1241

Query: 1191 CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL 1250
            CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL
Sbjct: 1242 CASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTL 1301

Query: 1251 SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA 1310
            SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA
Sbjct: 1302 SSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKA 1361

Query: 1311 AIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFL 1370
            AIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTE QVADILTKPLPTCKFEFL
Sbjct: 1362 AIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFL 1421

Query: 1371 RSKLGVCNS 1379
            RSKLGVCNS
Sbjct: 1422 RSKLGVCNS 1430

[Close]

BLAST of IVF0019627 vs. NCBI nr
Match: TYK00004.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2627 bits (6809), Expect = 0.0
Identity = 1317/1339 (98.36%), Postives = 1323/1339 (98.81%), Query Frame = 0


Query: 44   VENNNWYQ---SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEA 103
            VE N W+    SSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEA
Sbjct: 595  VEENLWFSANCSSLLKGSVSVSCCVMDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEA 654

Query: 104  LDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSA 163
            LDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSA
Sbjct: 655  LDIWEAVEEDYEIPALPDNPTMAQIKAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSA 714

Query: 164  YEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIKLLGSV 223
            YEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQI+LLGSV
Sbjct: 715  YEIWNYLKSEYEGDERIKGMRVLNLIREFELQKMKETESIKEYSVRLLDIANQIRLLGSV 774

Query: 224  FKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEG 283
            FKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEG
Sbjct: 775  FKDSRIVEKILVSVPEKFEASISALENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEG 834

Query: 284  ALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWR 343
            ALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWR
Sbjct: 835  ALPAKHHENVRNNKKKKFFKKNQISTRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWR 894

Query: 344  RPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLI 403
            RPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLI
Sbjct: 895  RPNAKCTKCNQMGHEAVICRNNNQQQGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLI 954

Query: 404  DSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVP 463
            DSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVP
Sbjct: 955  DSGCTNHMTHDKELFKDLKPTNITKVRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVP 1014

Query: 464  DINQNLLSVGQLIEKGLKVTFENEYCLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFAL 523
            DINQNLLSVGQLIEKG KVTFENEYCLIKDA NQDIFKVKMKGKSFSLNPLEE+QSVFAL
Sbjct: 1015 DINQNLLSVGQLIEKGFKVTFENEYCLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFAL 1074

Query: 524  KEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRA 583
            KEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRA
Sbjct: 1075 KEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRA 1134

Query: 584  TQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVE 643
            TQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVE
Sbjct: 1135 TQKLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVE 1194

Query: 644  NESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTR 703
            NESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTR
Sbjct: 1195 NESGCKIQMVRSDNGKEYVSAEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTR 1254

Query: 704  CMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFT 763
            CMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFT
Sbjct: 1255 CMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFT 1314

Query: 764  HVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEK 823
            HVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEK
Sbjct: 1315 HVPQSKRDKLDRRASPGVFIGYSSISKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEK 1374

Query: 824  KGHTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAK 883
            KG TLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAK
Sbjct: 1375 KGQTLEKMKFKFFDSSIEEEDDRQNEIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAK 1434

Query: 884  KDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVK 943
            KDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVK
Sbjct: 1435 KDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVK 1494

Query: 944  GYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQP 1003
            GYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQP
Sbjct: 1495 GYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQP 1554

Query: 1004 EGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNI 1063
            EGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNI
Sbjct: 1555 EGCEKQGERNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNI 1614

Query: 1064 LIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKK 1123
            LIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKK
Sbjct: 1615 LIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKK 1674

Query: 1124 YAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN 1183
            YAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN
Sbjct: 1675 YAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN 1734

Query: 1184 AVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDM 1243
            AVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDM
Sbjct: 1735 AVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDM 1794

Query: 1244 RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKK 1303
            RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKK
Sbjct: 1795 RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALWLRKILLDLDLEQKK 1854

Query: 1304 STEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEVQVADILTK 1363
            STEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTE QVADILTK
Sbjct: 1855 STEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTK 1914

Query: 1364 PLPTCKFEFLRSKLGVCNS 1379
            PLPTCKFEFLR  + +  +
Sbjct: 1915 PLPTCKFEFLRLSVDLSKA 1933

[Close]

BLAST of IVF0019627 vs. NCBI nr
Match: TYJ95793.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK04080.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK07482.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK23562.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK24808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2614 bits (6775), Expect = 0.0
Identity = 1308/1314 (99.54%), Postives = 1309/1314 (99.62%), Query Frame = 0


Query: 66   MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 125
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 126  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 185
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 186  IREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISAL 245
            IREFELQKMKETESIKEYSVRLLDIANQI+LLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 246  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 305
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 306  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 365
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 366  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 425
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 426  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENEY 485
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG KVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 486  CLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 545
            CLIKDA NQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 546  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 605
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 606  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 665
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 666  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 725
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 726  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 785
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 786  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKFKFFDSSIEEEDDRQN 845
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKG TLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 846  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 905
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 906  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 965
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 966  LFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1025
            LFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1026 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1085
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1086 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1145
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1146 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1205
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1206 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1265
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1266 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1325
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1326 HFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFLRSKLGVCNS 1379
            HFNIKLFFLREVQKSGEVILVYCKTE QVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of IVF0019627 vs. NCBI nr
Match: KAA0025843.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2613 bits (6774), Expect = 0.0
Identity = 1307/1314 (99.47%), Postives = 1309/1314 (99.62%), Query Frame = 0


Query: 66   MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 125
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 126  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 185
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 186  IREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISAL 245
            IREFELQKMKETESIKEYSVRLLDIANQI+LLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 246  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 305
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 306  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 365
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 366  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 425
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 426  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENEY 485
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG KVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 486  CLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 545
            CLIKDA NQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 546  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 605
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 606  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 665
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 666  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 725
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 726  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 785
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 786  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKFKFFDSSIEEEDDRQN 845
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKG TLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 846  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 905
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 906  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 965
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 966  LFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1025
            LFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1026 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1085
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1086 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1145
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1146 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1205
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1206 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1265
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1266 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1325
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1326 HFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFLRSKLGVCNS 1379
            HFNIKLFFLREVQKSGEVILVYCKTEVQV DILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEVQVVDILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of IVF0019627 vs. NCBI nr
Match: KAA0036309.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0039006.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0039248.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0063721.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYJ96423.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 2612 bits (6771), Expect = 0.0
Identity = 1307/1314 (99.47%), Postives = 1309/1314 (99.62%), Query Frame = 0


Query: 66   MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 125
            MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI
Sbjct: 1    MDAITSSSFTSISPLIFDGDNYQVWAVRMEAYMEALDIWEAVEEDYEIPALPDNPTMAQI 60

Query: 126  KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 185
            KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL
Sbjct: 61   KAQKEKKTKKSKAKACLFAAVSSTIFTRIMTLRSAYEIWNYLKSEYEGDERIKGMRVLNL 120

Query: 186  IREFELQKMKETESIKEYSVRLLDIANQIKLLGSVFKDSRIVEKILVSVPEKFEASISAL 245
            IREFELQKMKETESIKEYSVRLLDIANQI+LLGSVFKDSRIVEKILVSVPEKFEASISAL
Sbjct: 121  IREFELQKMKETESIKEYSVRLLDIANQIRLLGSVFKDSRIVEKILVSVPEKFEASISAL 180

Query: 246  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 305
            ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS
Sbjct: 181  ENTKDLTQITLAEILNALQAQEQRRAMRQEGAVEGALPAKHHENVRNNKKKKFFKKNQIS 240

Query: 306  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 365
            TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ
Sbjct: 241  TRESSTYNKAGVKKGSYPPCSHCNKQGHPPFKCWRRPNAKCTKCNQMGHEAVICRNNNQQ 300

Query: 366  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 425
            QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK
Sbjct: 301  QGVEAKIAYQEEEEEDQLFVATCFVGGESNESWLIDSGCTNHMTHDKELFKDLKPTNITK 360

Query: 426  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGLKVTFENEY 485
            VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKG KVTFENEY
Sbjct: 361  VRIGNGDYISVKGKGTIAIASCKGTKHIQDVLFVPDINQNLLSVGQLIEKGFKVTFENEY 420

Query: 486  CLIKDATNQDIFKVKMKGKSFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 545
            CLIKDA NQDIFKVKMKGKSFSLNPLEE+QSVFALKEDETQLWHKRVGHYHHQGLLQLTE
Sbjct: 421  CLIKDAANQDIFKVKMKGKSFSLNPLEEKQSVFALKEDETQLWHKRVGHYHHQGLLQLTE 480

Query: 546  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 605
            LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY
Sbjct: 481  LALDFPKLSEEISSCKACHFGKQNRKSFPKSSWRATQKLQLIHTDVAGPQRTPSLKGSLY 540

Query: 606  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 665
            YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK
Sbjct: 541  YIAFIDDFTRMCWIFFLKFKSEVAHVFWKFKARVENESGCKIQMVRSDNGKEYVSAEFDK 600

Query: 666  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 725
            FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN
Sbjct: 601  FCEDSGIKHQLTAPYTPQQNGVSERRNRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQN 660

Query: 726  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 785
            RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI
Sbjct: 661  RLPTKALKEKTPFEAWYGYKPSLKFLKVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSI 720

Query: 786  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGHTLEKMKFKFFDSSIEEEDDRQN 845
            SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKG TLEKMKFKFFDSSIEEEDDRQN
Sbjct: 721  SKAYKIFQPQTGKIVVSRDVHFEEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN 780

Query: 846  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 905
            EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV
Sbjct: 781  EIVDDASVRGTRLLSDIYERCNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILV 840

Query: 906  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 965
            DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL
Sbjct: 841  DRPQDRKVIGVKWVFRTKLNADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRL 900

Query: 966  LFAIAAQKGWKLYQLDVKSVFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 1025
            LFAIAAQKGWKLYQLDVKS FLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA
Sbjct: 901  LFAIAAQKGWKLYQLDVKSAFLNGVLQEEIYVEQPEGCEKQGERNKVYLLKKALYGLKQA 960

Query: 1026 PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1085
            PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW
Sbjct: 961  PRAWYSKIDEHLLSLGFLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKW 1020

Query: 1086 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1145
            EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE
Sbjct: 1021 EMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKE 1080

Query: 1146 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1205
            KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR
Sbjct: 1081 KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIR 1140

Query: 1206 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1265
            YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV
Sbjct: 1141 YVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIV 1200

Query: 1266 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1325
            AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK
Sbjct: 1201 AQSTAEAEFIAATATANQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTK 1260

Query: 1326 HFNIKLFFLREVQKSGEVILVYCKTEVQVADILTKPLPTCKFEFLRSKLGVCNS 1379
            HFNIKLFFLREVQKSGEVILVYCKTE QVADILTKPLPTCKFEFLRSKLGVCNS
Sbjct: 1261 HFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS 1314

[Close]

BLAST of IVF0019627 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-97
Identity = 189/475 (39.79%), Postives = 285/475 (60.00%), Query Frame = 0


Query: 866  CNVAVCEPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLN 925
            C     EP+ Y EAK+   W  AM++E+  +E   TW +   P ++K IG KWV++ K N
Sbjct: 79   CIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYN 138

Query: 926  ADGSINKHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQKGWKLYQLDVKSV 985
            +DG+I ++KARLV KGY Q  G+D+ +TF+PV ++ +++L+ AI+A   + L+QLD+ + 
Sbjct: 139  SDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198

Query: 986  FLNGVLQEEIYVEQPEG-CEKQGER---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLG 1045
            FLNG L EEIY++ P G   +QG+    N V  LKK++YGLKQA R W+ K    L+  G
Sbjct: 199  FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258

Query: 1046 FLKSLSESTLYVKHNGTNILIVSLYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSY 1105
            F++S S+ T ++K   T  L V +YVDD+++  NN   +   K ++   F++ DLG + Y
Sbjct: 259  FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318

Query: 1106 FLGIEIKQGQGEVFICQKKYAKEILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYF 1165
            FLG+EI +    + ICQ+KYA ++L +  +  CK  S PM+         G D VD   +
Sbjct: 319  FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378

Query: 1166 RSLIGCLMYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK 1225
            R LIG LMYL  TR DI  AV+ LS+F       H +A  +++ Y+KGT   G+ ++   
Sbjct: 379  RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438

Query: 1226 EFKLIGFSDSDWGGSIDDMRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATA 1285
            E +L  FSD+ +    D  RST GYC  L + + SW SKKQ++V++S+AEAE+ A +   
Sbjct: 439  EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFAT 498

Query: 1286 NQALWLRKILLDLDLEQKKSTEILVDNKAAIAISHNPVFYKKTKHFNIKLFFLRE 1337
            ++ +WL +   +L L   K T +  DN AAI I+ N VF+++TKH       +RE
Sbjct: 499  DEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of IVF0019627 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.4e-38
Identity = 89/222 (40.09%), Postives = 126/222 (56.76%), Query Frame = 0


Query: 1065 LYVDDLLVTGNNADHIQNFKWEMMKMFEMTDLGLMSYFLGIEIKQGQGEVFICQKKYAKE 1124
            LYVDD+L+TG++   +    +++   F M DLG + YFLGI+IK     +F+ Q KYA++
Sbjct: 5    LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 1125 ILKKFKMDECKAVSTPMNQKEKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNAVSI 1184
            IL    M +CK +STP+  K        A   D   FRS++G L YLT TRPDI  AV+I
Sbjct: 65   ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 1185 LSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGFSDSDWGGSIDDMRSTL 1244
            + + MH  +       KRV+RYVKGT   G+   +  +  +  F DSDW G     RST 
Sbjct: 125  VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 184

Query: 1245 GYCFTLSSGVFSWSSKKQEIVAQSTAEAEFIAATATANQALW 1287
            G+C  L   + SWS+K+Q  V++S+ E E+ A   TA +  W
Sbjct: 185  GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0019627 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-21
Identity = 47/101 (46.53%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 872 EPANYAEAKKDQRWIAAMEEELSMIEKNKTWILVDRPQDRKVIGVKWVFRTKLNADGSIN 931
           EP +   A KD  W  AM+EEL  + +NKTWILV  P ++ ++G KWVF+TKL++DG+++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 932 KHKARLVVKGYAQIFGVDYSDTFAPVARMDTIRLLFAIAAQ 973
           + KARLV KG+ Q  G+ + +T++PV R  TIR +  +A Q
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

[Close]

BLAST of IVF0019627 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-11
Identity = 39/100 (39.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 692 NRYIMEMTRCMLHEKSLPKKFWAEAANTAVFLQNRLPTKALKEKTPFEAWYGYKPSLKFL 751
           NR I+E  R ML E  LPK F A+AANTAV + N+ P+ A+    P E W+   P+  +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 752 KVFGCLCFTHVPQSKRDKLDRRASPGVFIGYSSISKAYKI 792
           + FGC+ + H  +    KL  RA  G   G   I++   I
Sbjct: 62  RRFGCVAYIHCDEG---KLKPRAKKGEEKGSYLINRIVSI 98

[Close]

BLAST of IVF0019627 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 1169 MYLTATRPDILNAVSILSRFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKEFKLIGF 1228
            MYLT TRPD+  AV+ LS+F   +    ++A  +V+ YVKGT   G+ ++   + +L  F
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 1229 SDSDWGGSIDDMRSTLGYC 1248
            +DSDW    D  RS  G+C
Sbjct: 61   ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of IVF0019627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-179	31.58	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	7.6e-160	29.07	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	9.3e-158	29.08	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.8e-151	28.21	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	3.3e-38	32.57	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of IVF0019627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DBU0	0.0e+00	99.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BL45	0.0e+00	98.95	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DMJ1	0.0e+00	99.54	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SMD9	0.0e+00	99.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3E2V7	0.0e+00	99.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of IVF0019627 vs. NCBI nr


Match Name	Identity	Description
TYK21117.1	99.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK00004.1	98.36	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYJ95793.1	99.54	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0025843.1	99.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0036309.1	99.47	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of IVF0019627 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.4e-97	39.79	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.4e-38	40.09	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	2.2e-21	46.53	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	2.1e-11	39.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00240.1	1.8e-10	40.51	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 507..568 e-value: 1.6E-9 score: 37.5
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 581..682 e-value: 5.2E-17 score: 62.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 570..745 score: 24.503267
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 82..108 e-value: 2.6E-11 score: 43.0
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 899..1141 e-value: 1.1E-86 score: 290.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 576..756 e-value: 5.8E-47 score: 161.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 132..272 e-value: 1.9E-27 score: 95.7
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 882..1262 coord: 396..828
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1226..1364 e-value: 5.64884E-66 score: 217.336
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 320..363
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 584..754
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 898..1331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019627.1	IVF0019627.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0015074	DNA integration
biological_process	GO:0007165	signal transduction
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding