IVF0019610 (gene) Melon (IVF77) v1

Overview
NameIVF0019610
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionsplicing factor 3A subunit 2
Locationchr04: 30469675 .. 30472681 (-)
RNA-Seq ExpressionIVF0019610
SyntenyIVF0019610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCGATTCGCTTCGACAAACAGAGAAAGGGGTTTTTAGGTCGCCGGAAGGACGAAGAAGATTTCTCAATCGGAGATCAGGTTCCGGTGTAGAAGTGACGCCGAAGTTCGACGGGGATGGATAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATTGACCGTAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCTTATTTTATGCGCAATCATCTTGGAAGGTCCATCCTTTTTCTTTCTCATTCTAGTCCTACCCGTTTTTTTTTTGGTAATTCTTTAGTTGAATTTCATTGGTATTTGGGGTGTTTTTGTAGCTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTATTTGGCGCATACGCAGGGGAAGCGGCATCAGACTAATTTGGCCAAGAGAGCTGCCCGTGAAGCAAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGAGGAAGGTCTCTGTTCGCAAAACAGGCATGCTTTTGTGCCCTTCTCCTTTATGTATTTATAGCTTCAGCATTAATTGTGATTGAGGTGAACAATAAGTTTATTGTTGCTTCTTTGTAATCCTTCGGAAGGGTCGCTGCCAAGTTAATTTTAAGTTGCTTCTCGATAGTGAGGATTGATATGAAATGATTTTGGTATAATTCAACCCTTTGCAATGGGATTAATAATACTCTTAGTTTGACCATTTTATCATAATGACGTAATAGGAACAGCGAGTTTAAGATTTCTGCTTTTAAGTCAAGTAACATTGATATGTATCCAATTTACTTCACGTCGAGTAAGAATTAGCAGTTGGAAATGGCCAGTGTTGTGGGGTAGCTTTGAAATTTGAAGTGTTGGTTGTAATTTGCTGGATGTGTTCCTTATCGTTTGTGTTTGTACTTAAAAGTGGAGTAGTGCTAATTAACTCCTTCCCTGGCATACTTTCAGTTAAAATTGGAAGGCCCGGTTATCGAGTAACAAAGCAATTTGATTCTGAAACAAAGCAGCGATCTCTCCTTTTTCAGGTATGGCTTTATAGTTCGTACAACAGGCTTCTTTAGCATCTGTTGAAGATGATTTTTATTGAATTACTACTCAATTGTGTTGTGTCTGATTTGCCTCTCCTCCTTTCTTTACTCATACATTGTTGTTATTCCATGCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCTAGGCATCGGTTTATGTCCTCTTACGAGCAGGTTAACTAAGTTTCACTATTACATGCTTCTGAAAACTTGATATTGCCTTTTATCATTTCTATTTCTCTTAGAGCTAATTTTTCATTTTTATTGTTACTATGTTCAGCGTGTGCAACCTTTTGACAAACGATACCAATATCTTCTGTTTGCAGCCGAACCATATGAGATAATTGCATTCAAGGTATTCTAGACATGATAATCGTAAAACAAGTTGATCATAGGTTTGGCTTTTTAGTTCCTACTGAGTACTGACAGATCTTTACTTGAATGGATTTTAGGTTCCAAGCACAGAGATAGACAAATCGACTCCAAAATTCTTTTCACACTGGGATCCGGACTCTAAAATGTTCACGGTTTAGCTCTTTTTCTTCCTTCTAACTTATAAAAATACGAATACTTTTCTTATTCATGTGACACTCTTAGCTCATTACTTACAATTCATCTATATCTTAGGAATTTTAGGATTATTTACAGCCGATTTTTAACTTTTCAGTGAATGAATTCAGTTTCTTTTTTAATCTATTTTGTTATTAAACAAATCTATTGTAGTTTGGCCTCCCCGTGAGTATTAGATAGAAAAATATTAATCGGATAGATTGCATCATGATTCCCTTTTATTCTTACTACTTGTTTGACTTATTTTTGCTTTTGGGCCCCAAGAATCCGTGTATGCATTCTTGACTGGCTGATTGCATGCTTGGGAGTGGTTTTGAAATTTTCACTCCTTTAATCCGGTTTTGAAGTTTTAAATAAATGATTAAATTGATTTTGAATAAGGCTTTTTCGGGTGTGATTTTGATAGAACATGATAAATGATTCTTCTCATTTCAACATCACTTTAAAACATATTTTTACGATTGGTTTTGAAATTGTTAATTGTCATTTCAAAATCACCTTCACGTCGTGTGGTTACACCTTATTTGTCAGCCCTTCATATTATTGGTTTTTATTCTTTCATATTTAAAAATCCGACACTCTTACTCTTTGATATGGTTAATGATTTAGCACTTTTAATCTTGGTTCCAAAAACCAAAATGGTTACAGTTTACTCTAGTAGTGTCATTTAGGTTTTGATGATGGACTTTTCCAACGACTATACTGAATATGTAATTTTGCAGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCGAACAAGCCACCACCTGTACCTGCAGCAAATGGAACAGTGCCATCTGGTGCACCTCCAAGGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCTCCACCTCCACCCCAGCAAGGAGCACCACCAAGAGTTCCTCCTCCTCCAATGCCAGGGTCCTTGCCGCCTCCACCTTCTGTAATGGCCAATGGTCCTCCTAGGCCGATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCACCACCTCCAGTTGGCAATAATACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGGCCTCCTATGCCGCCTCCTCCACAGAGCTTCCCAGGTCAGGGTATCCGGCAGCCACCACCACCACCACCCAATATGGGATAGGCCACTTTAGCATCGTTAAGGCAATGGATTTTAATTGTTAGCCTCATTAGTGAATTTTGATGCACTTTTCCTTTTCCGTTGTATGATCATATTTCGGCATGTAGAATCATAACATACCAACCTTTGAAATTGTTGTATCTTTTCAGGCAAAATGAGTATTTTGTTAATTGTGCCTATGTTTTCTTGTAGAGGCTTTGTATTTCAC

mRNA sequence

GGCGATTCGCTTCGACAAACAGAGAAAGGGGTTTTTAGGTCGCCGGAAGGACGAAGAAGATTTCTCAATCGGAGATCAGGTTCCGGTGTAGAAGTGACGCCGAAGTTCGACGGGGATGGATAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATTGACCGTAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCTTATTTTATGCGCAATCATCTTGGAAGCTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTATTTGGCGCATACGCAGGGGAAGCGGCATCAGACTAATTTGGCCAAGAGAGCTGCCCGTGAAGCAAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGAGGAAGGTCTCTGTTCGCAAAACAGTTAAAATTGGAAGGCCCGGTTATCGAGTAACAAAGCAATTTGATTCTGAAACAAAGCAGCGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCTAGGCATCGGTTTATGTCCTCTTACGAGCAGCGTGTGCAACCTTTTGACAAACGATACCAATATCTTCTGTTTGCAGCCGAACCATATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATAGACAAATCGACTCCAAAATTCTTTTCACACTGGGATCCGGACTCTAAAATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCGAACAAGCCACCACCTGTACCTGCAGCAAATGGAACAGTGCCATCTGGTGCACCTCCAAGGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCTCCACCTCCACCCCAGCAAGGAGCACCACCAAGAGTTCCTCCTCCTCCAATGCCAGGGTCCTTGCCGCCTCCACCTTCTGTAATGGCCAATGGTCCTCCTAGGCCGATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCACCACCTCCAGTTGGCAATAATACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGGCCTCCTATGCCGCCTCCTCCACAGAGCTTCCCAGGTCAGGGTATCCGGCAGCCACCACCACCACCACCCAATATGGGATAGGCCACTTTAGCATCGTTAAGGCAATGGATTTTAATTGTTAGCCTCATTAGTGAATTTTGATGCACTTTTCCTTTTCCGTTGTATGATCATATTTCGGCATGTAGAATCATAACATACCAACCTTTGAAATTGTTGTATCTTTTCAGGCAAAATGAGTATTTTGTTAATTGTGCCTATGTTTTCTTGTAGAGGCTTTGTATTTCAC

Coding sequence (CDS)

ATGGATAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAAAATGAAGCTATTGACCGTAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCTTATTTTATGCGCAATCATCTTGGAAGCTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTATTTGGCGCATACGCAGGGGAAGCGGCATCAGACTAATTTGGCCAAGAGAGCTGCCCGTGAAGCAAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGAGGAAGGTCTCTGTTCGCAAAACAGTTAAAATTGGAAGGCCCGGTTATCGAGTAACAAAGCAATTTGATTCTGAAACAAAGCAGCGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTAGCAAAGCCTAGGCATCGGTTTATGTCCTCTTACGAGCAGCGTGTGCAACCTTTTGACAAACGATACCAATATCTTCTGTTTGCAGCCGAACCATATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATAGACAAATCGACTCCAAAATTCTTTTCACACTGGGATCCGGACTCTAAAATGTTCACGTTGCAATTGTATTTCAAATCCAAGCCACAAGAGGCGAACAAGCCACCACCTGTACCTGCAGCAAATGGAACAGTGCCATCTGGTGCACCTCCAAGGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCTCCACCTCCACCCCAGCAAGGAGCACCACCAAGAGTTCCTCCTCCTCCAATGCCAGGGTCCTTGCCGCCTCCACCTTCTGTAATGGCCAATGGTCCTCCTAGGCCGATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCACCACCTCCAGTTGGCAATAATACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGGCCTCCTATGCCGCCTCCTCCACAGAGCTTCCCAGGTCAGGGTATCCGGCAGCCACCACCACCACCACCCAATATGGGATAG

Protein sequence

MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Homology
[Close]
BLAST of IVF0019610 vs. ExPASy Swiss-Prot
Match: Q15428 (Splicing factor 3A subunit 2 OS=Homo sapiens OX=9606 GN=SF3A2 PE=1 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 6.2e-79
Identity = 205/364 (56.32%), Postives = 237/364 (65.11%), Query Frame = 0 

Query: 6   GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 65
           G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 66  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSET 125
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+K VKIGRPGY+VTKQ DSE 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDSEM 127

Query: 126 KQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTE 185
            Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 186 IDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAP 245
           IDK+  KF++HW+ ++K F LQ +FK +   A           K PP P  NG  P    
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPL 247

Query: 246 PRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSV--MANG--PPRPM 305
           P  LPPPP      PP PP  P    PP  P  PPP PG  PP P V   A+G  PP P 
Sbjct: 248 PESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPG 307

Query: 306 PPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQSF--PGQGIRQPPP---PP 342
               AP + PP P  +   +   P      PP P   PP      P  G+  P P   PP
Sbjct: 308 VHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP 367

[Close]
BLAST of IVF0019610 vs. ExPASy Swiss-Prot
Match: A5PJN8 (Splicing factor 3A subunit 2 OS=Bos taurus OX=9913 GN=SF3A2 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.8e-77
Identity = 197/344 (57.27%), Postives = 232/344 (67.44%), Query Frame = 0 

Query: 6   GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 65
           G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 66  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSET 125
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+K VKIGRPGY+VTKQ D+E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 126 KQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTE 185
            Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 186 IDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQA 245
           IDK+  KF++HW+ ++K F LQ +FK +     KPP  P    ++P+G P    PPPP  
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKME-----KPPAPP----SLPAGPPGVKRPPPPLM 247

Query: 246 PPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMA 305
              PP PP    P  +PPPP PG LP PP  M    P P  P G P +PPP P  +    
Sbjct: 248 NGLPPRPP---LPESLPPPP-PGGLPLPP--MPPSGPAPSGPPGPPQLPPPAPGVHPPAP 307

Query: 306 NFTPGTQMNRPPM----PPPPQSFPGQGIRQPP-----PPPPNM 341
              P      PP     PP P   P   +  PP     PP P +
Sbjct: 308 VVHPPASGVHPPAPGVHPPAPGVHPPAPVVHPPASGVHPPAPGV 336

[Close]
BLAST of IVF0019610 vs. ExPASy Swiss-Prot
Match: Q6AXT8 (Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.8e-77
Identity = 199/343 (58.02%), Postives = 232/343 (67.64%), Query Frame = 0 

Query: 6   GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 65
           G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 66  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSET 125
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+K VKIGRPGY+VTKQ D+E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 126 KQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTE 185
            Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGVMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 186 IDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLPPPPQA 245
           IDK+  KF++HW+ ++K F LQ +FK +     KPP  P    ++P+G P    PPPP  
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKME-----KPPAPP----SLPAGPPGVKRPPPPLM 247

Query: 246 PPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMA 305
              PP PP    P  +PPPP PG LP PP  M    P P  P G P +PPP P  +    
Sbjct: 248 NGLPPRPP---LPDALPPPP-PGGLPLPP--MPPTGPAPSGPPGPPQMPPPAPGVHPPAP 307

Query: 306 NFTPGTQMNRPPM----PPPPQSFPGQGIRQPPPP---PPNMG 342
              P T    PP     PP P   P      PP P   PP  G
Sbjct: 308 VVHPPTSGVHPPAPGVHPPAPVVHPPTSGVHPPAPGVHPPAPG 335

[Close]
BLAST of IVF0019610 vs. ExPASy Swiss-Prot
Match: Q62203 (Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=2)

HSP 1 Score: 269.6 bits (688), Expect = 4.7e-71
Identity = 197/359 (54.87%), Postives = 224/359 (62.40%), Query Frame = 0 

Query: 6   GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 65
           G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 66  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSET 125
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+K VKIGRPGY+VTKQ D+E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEQVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 126 KQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTE 185
            Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 186 IDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEAN----------KPPPVPAANGTVPSGAP 245
           IDK+  KF          F LQ +FK +   A           K PP P  NG  P    
Sbjct: 188 IDKAEGKF----------FFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPL 247

Query: 246 PRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPGSLPPPPSVMANGPPRPMPPGG 305
           P  LPPPP      PP PP  P    PP  P  PPP PG  PP P V    PP       
Sbjct: 248 PDALPPPPPGGLPLPPMPPTGPAPSGPPGPPQMPPPAPGVHPPAPVV---HPPTSGVHPP 307

Query: 306 APPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQSF--PGQGIRQPPP--PPPNMG 342
           AP + PP PV +   +   P      PP P   PP      P  G+  P P   PP  G
Sbjct: 308 APGVHPPAPVVHPPTSGVHPPAPGVHPPTPGVHPPAPGVHPPAPGVHPPAPGVHPPTPG 353

[Close]
BLAST of IVF0019610 vs. ExPASy Swiss-Prot
Match: Q54B65 (Splicing factor 3A subunit 2 OS=Dictyostelium discoideum OX=44689 GN=sf3a2 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 6.0e-66
Identity = 131/214 (61.21%), Postives = 170/214 (79.44%), Query Frame = 0 

Query: 4   EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNN 63
           E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN
Sbjct: 3   EYG-KAGSGGLQSSQYDNIDRRERQKQLVLEHVDVSKDPYIISNHIGSFECRLCLTVHNN 62

Query: 64  EGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KRKVSVRKTVKIGRPGYRVTKQ 123
            GNYLAHTQGK+HQT+LA+RAA+E +E P+  + +     +V  +KT+KIGRPGY++ KQ
Sbjct: 63  VGNYLAHTQGKKHQTHLARRAAKEQRENPSVSKNNYIQTTRVIHKKTIKIGRPGYKIIKQ 122

Query: 124 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 183
            DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK
Sbjct: 123 RDSKTGQLSLLFQIDYPEIESGLQPRHRIMSAFEQRVEQPNKDYQYLLFAAEPYETIAFK 182

Query: 184 VPSTEIDKST---PKFFSHWDPDSKMFTLQLYFK 212
           +P+ EID++T    KFF+HWD  +K FTLQLYFK
Sbjct: 183 IPNKEIDRTTGPDGKFFTHWD-RNKTFTLQLYFK 214

[Close]
BLAST of IVF0019610 vs. ExPASy TrEMBL
Match: A0A5D3DPC7 (Splicing factor 3A subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002950 PE=3 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 8.1e-183
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 342
           NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of IVF0019610 vs. ExPASy TrEMBL
Match: A0A1S3B729 (splicing factor 3A subunit 2 OS=Cucumis melo OX=3656 GN=LOC103486522 PE=3 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 8.1e-183
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 342
           NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of IVF0019610 vs. ExPASy TrEMBL
Match: A0A0A0LEB1 (Matrin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G743440 PE=3 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 6.9e-182
Identity = 338/341 (99.12%), Postives = 340/341 (99.71%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPP+G
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPIG 300

Query: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 342
           NNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of IVF0019610 vs. ExPASy TrEMBL
Match: A0A5A7TQW8 (Splicing factor 3A subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003160 PE=3 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 6.5e-180
Identity = 340/350 (97.14%), Postives = 340/350 (97.14%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKT---------VKIG 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKT          KIG
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTGMLLCPSPLFKIG 120

Query: 121 RPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAA 180
           RPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAA
Sbjct: 121 RPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAA 180

Query: 181 EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVP 240
           EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVP
Sbjct: 181 EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVP 240

Query: 241 SGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP 300
           SGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP
Sbjct: 241 SGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP 300

Query: 301 PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 342
           PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Sbjct: 301 PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 350

[Close]
BLAST of IVF0019610 vs. ExPASy TrEMBL
Match: A0A6J1KWM2 (splicing factor 3A subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111498269 PE=3 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.6e-173
Identity = 328/341 (96.19%), Postives = 329/341 (96.48%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTV       PLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTV-------PLP 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 342
           NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 334

[Close]
BLAST of IVF0019610 vs. NCBI nr
Match: XP_008442733.1 (PREDICTED: splicing factor 3A subunit 2 [Cucumis melo] >TYK25169.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 644 bits (1662), Expect = 1.55e-232
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341
           NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of IVF0019610 vs. NCBI nr
Match: XP_004137848.1 (splicing factor 3A subunit 2 [Cucumis sativus] >KGN59007.1 hypothetical protein Csa_002498 [Cucumis sativus])

HSP 1 Score: 641 bits (1654), Expect = 2.56e-231
Identity = 338/341 (99.12%), Postives = 340/341 (99.71%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPP+G
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPIG 300

Query: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341
           NNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of IVF0019610 vs. NCBI nr
Match: XP_038905938.1 (splicing factor 3A subunit 2 [Benincasa hispida])

HSP 1 Score: 637 bits (1643), Expect = 1.22e-229
Identity = 337/341 (98.83%), Postives = 338/341 (99.12%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRP+P
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPMP 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300
           PPPQAP PPPPPPQQG PPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPAPPPPPPQQGPPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341
           NNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG 341

[Close]
BLAST of IVF0019610 vs. NCBI nr
Match: KAA0043971.1 (splicing factor 3A subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 635 bits (1637), Expect = 1.40e-228
Identity = 340/350 (97.14%), Postives = 340/350 (97.14%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKT---------VKIG 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKT          KIG
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTGMLLCPSPLFKIG 120

Query: 121 RPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAA 180
           RPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAA
Sbjct: 121 RPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAA 180

Query: 181 EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVP 240
           EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVP
Sbjct: 181 EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVP 240

Query: 241 SGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP 300
           SGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP
Sbjct: 241 SGAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAP 300

Query: 301 PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341
           PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG
Sbjct: 301 PIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 350

[Close]
BLAST of IVF0019610 vs. NCBI nr
Match: XP_023005145.1 (splicing factor 3A subunit 2 [Cucurbita maxima])

HSP 1 Score: 613 bits (1580), Expect = 3.74e-220
Identity = 328/341 (96.19%), Postives = 329/341 (96.48%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTVP       LP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVP-------LP 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVG 300
           PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Sbjct: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG 300

Query: 301 NNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQPPPPPPNMG 341
           NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Sbjct: 301 NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 334

[Close]
BLAST of IVF0019610 vs. TAIR 10
Match: AT2G32600.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 416.4 bits (1069), Expect = 2.2e-116
Identity = 228/289 (78.89%), Postives = 237/289 (82.01%), Query Frame = 0 

Query: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASGQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR VSVR+TVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTKPQPLKRNVSVRRTVKIGRPGYRVTKQ 120

Query: 121 FDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK 180
           +D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFK
Sbjct: 121 YDPELQQRSLLFQIEYPEIEDNIKPRHRFMSSYEQKVQPYDKSYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPPPVPAANGTVPSGAPPRPLP 240
           VPSTE+DKSTPKFFSHWDPDSKMFTLQ+YFK    E NKP     ANG            
Sbjct: 181 VPSTEVDKSTPKFFSHWDPDSKMFTLQVYFKPTKPEPNKPQSAVGANG------------ 240

Query: 241 PPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGG 290
                PPPPPPPP Q  P   PPPP  G  PPPP  MAN   RPMPP G
Sbjct: 241 ----LPPPPPPPPHQAQP---PPPPPSGLFPPPPPPMANNGFRPMPPAG 270

[Close]
BLAST of IVF0019610 vs. TAIR 10
Match: AT5G07740.1 (actin binding )

HSP 1 Score: 48.1 bits (113), Expect = 1.6e-05
Identity = 65/129 (50.39%), Postives = 69/129 (53.49%), Query Frame = 0 

Query: 220  PPPVPAANGTVPSGAPPRPLPPPPQ--APPPPPPPPQQ-GAPPRVPPPPMPGSLPPPPSV 279
            PPP P  +G    GAPP P PPP    APPPPPPPP   GAPP  PPPPM G  PPPP  
Sbjct: 1046 PPPPPPMHG----GAPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPP 1105

Query: 280  MANGPPRPMPP----GGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQSFPGQGIRQ 339
               G  +P PP    GGAPP PPPPP+         P  +   PP PPPP      G   
Sbjct: 1106 PMFGGAQPPPPPPMRGGAPP-PPPPPMRGGAPPPPPPPMRGGAPPPPPPPM----HGGAP 1165

Query: 340  PPPPPPNMG 342
            PPPPPP  G
Sbjct: 1166 PPPPPPMRG 1165

The following BLAST results are available for this feature:
BLAST of IVF0019610 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q154286.2e-7956.32Splicing factor 3A subunit 2 OS=Homo sapiens OX=9606 GN=SF3A2 PE=1 SV=2[more]
A5PJN85.8e-7757.27Splicing factor 3A subunit 2 OS=Bos taurus OX=9913 GN=SF3A2 PE=2 SV=1[more]
Q6AXT85.8e-7758.02Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1[more]
Q622034.7e-7154.87Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=2[more]
Q54B656.0e-6661.21Splicing factor 3A subunit 2 OS=Dictyostelium discoideum OX=44689 GN=sf3a2 PE=3 ... [more]
BLAST of IVF0019610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DPC78.1e-183100.00Splicing factor 3A subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3B7298.1e-183100.00splicing factor 3A subunit 2 OS=Cucumis melo OX=3656 GN=LOC103486522 PE=3 SV=1[more]
A0A0A0LEB16.9e-18299.12Matrin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G743440... [more]
A0A5A7TQW86.5e-18097.14Splicing factor 3A subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A6J1KWM22.6e-17396.19splicing factor 3A subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111498269 PE=3 SV... [more]
BLAST of IVF0019610 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442733.11.55e-232100.00PREDICTED: splicing factor 3A subunit 2 [Cucumis melo] >TYK25169.1 splicing fact... [more]
XP_004137848.12.56e-23199.12splicing factor 3A subunit 2 [Cucumis sativus] >KGN59007.1 hypothetical protein ... [more]
XP_038905938.11.22e-22998.83splicing factor 3A subunit 2 [Benincasa hispida][more]
KAA0043971.11.40e-22897.14splicing factor 3A subunit 2 [Cucumis melo var. makuwa][more]
XP_023005145.13.74e-22096.19splicing factor 3A subunit 2 [Cucurbita maxima][more]
BLAST of IVF0019610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G32600.12.2e-11678.89hydroxyproline-rich glycoprotein family protein [more]
AT5G07740.11.6e-0550.39actin binding [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 215..236
score: 30.91
coord: 255..272
score: 33.33
coord: 277..302
score: 27.69
coord: 236..252
score: 50.59
NoneNo IPR availableSMARTSM01050CactinC_cactus_3coord: 89..216
e-value: 6.7E-19
score: 78.8
NoneNo IPR availablePFAMPF12874zf-metcoord: 52..76
e-value: 1.9E-6
score: 28.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 46..89
e-value: 3.3E-5
score: 25.4
NoneNo IPR availableGENE3D2.60.40.2690coord: 93..219
e-value: 1.7E-38
score: 133.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..302
NoneNo IPR availablePANTHERPTHR23205SPLICING FACTOR 3A SUBUNIT 2coord: 1..335
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 49..83
e-value: 9.0E-8
score: 41.8
IPR031781SF3A2 domainPFAMPF16835SF3A2coord: 110..204
e-value: 7.7E-35
score: 119.1
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 52..82
score: 9.295713
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 48..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0019610.2IVF0019610.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000245 spliceosomal complex assembly
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0005686 U2 snRNP
cellular_component GO:0071004 U2-type prespliceosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding