IVF0019528 (gene) Melon (IVF77) v1

Overview


Name	IVF0019528
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	binding partner of ACD11 1-like
Location	chr11: 5297618 .. 5299979 (-)
RNA-Seq Expression	IVF0019528
Synteny	IVF0019528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAGTCAGTTTCGTTATTTTGCCATATGTATTACTACGAACCTAAACAACCGCCAAGCCACAACGCAACTCTCAAGGCGTTCTTCCTTCTTATTTTCTCCTTTCTCTCTCTTAAAATTTGAATTGGCAAATCTCTCAGGTGAATCAAACAGAAGAATCATGGCGGTACGTGTTCAACTTTTTTTTTTCTTTTTCTGTTCATTACCCTCTCAATCTGTTTAATTTCTTGCGATTTTATTGATCTGATGCGTTGGTTCTACTTGTTATCAATATCAATTATGATTTAAGAATCAATCGCTATTTTCACCTTTTTCCCGTAATTTCTTATGAGCTGATGCGTGAATTCGTATTGAGGAGATGGAGATTGCGTTTTTTCGGTGTCTTAATGGCACAAGACTGGAAAGTAAAGTTTCGAACGATAAAGGAGGAAGTTATGATGCGCCGAAACGAGAACTGTTGAAATTCGGCTTTGATTTTGGTTAATTTTTTTTTTTTGTTGAATTGTAAAGTTTGTTTTTTTTTCTTTTTTCTTTTTGTTGTTTATGGTGGTTACAGACGAGGACGGTGAGAGTTACCAATGTCTCCTTAAGCGCGACAGAGAAAGATTTGAGAGACTTTTTTTCCTTTTCCGGTGAAATTGAATTTGTCGAAATGAGAAAGTAAGTATGATTTTGGCTGTTTTTTTTATGTCGATGAGTGATTTTTTTTGGGCATTTTCATTTACTTTATATGTTGTGTTCTTATAGTGACAATGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCAAAAGGGGCAGAGACGTCGATTCTACTCTCGGTTGATACAATTCTCTATCTTTTCTTCCTCTATTTTGATTATCCTTCTTGATCTCCAGATCTTCTGAATGATTTTATTTGATTATTTGCCATTTTAATGTGCTTATTTATTTAAACTTTCATTAGAAATTGATTCCTGAAAAGTAAGTAAATAGAACACAGTTTTATTCTTACGAGAAAGATGAGTTTTAACAAGTTTTTCATACATTTATTTCTTTAAGATTTAGATGGAGAAGCTGTTCAATATAGTTGTCATGCATTTTTATGTATAACTCTTGATTCATAGTTATTATCATTTTAGTTTCATTCTCAAACGTCTGAACAATGGAAAAATTATTTTTCTATCCCTCATGTTAAACAACTTCTTTGCTACCACCACATGTGAAAGAGGCATCTTCCTTTCATATCAATTTTCCTTTTTCTACTAATATTTACATCTGTCTCTTCTTCAAAACGGAGAGCTAAGAAATTTATGTTATCTGCTTCTTCTTGTTTCATCTGTTATCTTGCCTTTGCCTAATTAAACGGTCTTGCATCTCTAAGGGAGCTACAATTGTCGATCAGCCAGTAAGCATTTCTTCGGCTCCAGATTACAACCTTCCTGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCGTGTCTACTCCTGTATTTTCTTCAATCTTACCATCAACAATATATTTTCAATCTTGTTAGTAATGCGATTCCTAACATGAATGAATAAACATGTTTCACCAGGCTATAGACAACACAACCTCTACTACTACTACTGCTGGATCTGCAATCCAGAAGACAGAGGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTCGACGAAAGGCACCAATTGACTTCGACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAAATCGGCCTTAGTGAGAAAATTAGTGTTGGCACAACCGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCCGTGAGCAATGCTGGATCAGCTTTAATGGCTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACATTTCAACGAGTCGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGAGGATCAAGGGAAACATGTGGGAAATTCCTCTTAAACTCATTCCAAGAATTGCTGCGCTCCAATATATCAAAATCCATATATATTTGGCCAAAACAATGTGAGGACCAATTCTCTTAGCTTCCTATTTTTGATCTCAGTTTGATGTAATTTTAATGCTTTATTTTAGTTTTAGTATTAGGATTATACATACATATACGCTAAATTACATGCTTATGTTGTAATTCAATTGTAAGAAAAGCATATCTATATTCATATATATATATATATATATGCTTTGTGATACCGGCTTTCTTTGTTTAGATACTTGGCTTCTACTTGTGCATTTTGGTGTGTTGATATATTTTTCTACAACCATTTCTATTTGTGAG

mRNA sequence

AAGGAGTCAGTTTCGTTATTTTGCCATATGTATTACTACGAACCTAAACAACCGCCAAGCCACAACGCAACTCTCAAGGCGTTCTTCCTTCTTATTTTCTCCTTTCTCTCTCTTAAAATTTGAATTGGCAAATCTCTCAGGTGAATCAAACAGAAGAATCATGGCGACGAGGACGGTGAGAGTTACCAATGTCTCCTTAAGCGCGACAGAGAAAGATTTGAGAGACTTTTTTTCCTTTTCCGGTGAAATTGAATTTGTCGAAATGAGAAATGACAATGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCAAAAGGGGCAGAGACGTCGATTCTACTCTCGGGAGCTACAATTGTCGATCAGCCAGTAAGCATTTCTTCGGCTCCAGATTACAACCTTCCTGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCGTGTCTACTCCTGCTATAGACAACACAACCTCTACTACTACTACTGCTGGATCTGCAATCCAGAAGACAGAGGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTCGACGAAAGGCACCAATTGACTTCGACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAAATCGGCCTTAGTGAGAAAATTAGTGTTGGCACAACCGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCCGTGAGCAATGCTGGATCAGCTTTAATGGCTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACATTTCAACGAGTCGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGAGGATCAAGGGAAACATGTGGGAAATTCCTCTTAAACTCATTCCAAGAATTGCTGCGCTCCAATATATCAAAATCCATATATATTTGGCCAAAACAATGTGAGGACCAATTCTCTTAGCTTCCTATTTTTGATCTCAGTTTGATGTAATTTTAATGCTTTATTTTAGTTTTAGTATTAGGATTATACATACATATACGCTAAATTACATGCTTATGTTGTAATTCAATTGTAAGAAAAGCATATCTATATTCATATATATATATATATATATGCTTTGTGATACCGGCTTTCTTTGTTTAGATACTTGGCTTCTACTTGTGCATTTTGGTGTGTTGATATATTTTTCTACAACCATTTCTATTTGTGAG

Coding sequence (CDS)

ATGGCGACGAGGACGGTGAGAGTTACCAATGTCTCCTTAAGCGCGACAGAGAAAGATTTGAGAGACTTTTTTTCCTTTTCCGGTGAAATTGAATTTGTCGAAATGAGAAATGACAATGAGCGATCTCAACTTGCATTTGTTACCTTTAAGGATCCAAAAGGGGCAGAGACGTCGATTCTACTCTCGGGAGCTACAATTGTCGATCAGCCAGTAAGCATTTCTTCGGCTCCAGATTACAACCTTCCTGCAGTTGATGCCAGTGCCCCTGTAGCTGTACCCGTGTCTACTCCTGCTATAGACAACACAACCTCTACTACTACTACTGCTGGATCTGCAATCCAGAAGACAGAGGATGTTGTCAGCAGCATGCTAGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTTAATAAGGCGAAGTCTTTCGACGAAAGGCACCAATTGACTTCGACAGCCTCATCCAAAGTTGCTTCTCTGGACCAAAAAATCGGCCTTAGTGAGAAAATTAGTGTTGGCACAACCGTGGTGAATGAGAAAGTGAGGGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACTAAGGCAGCCGTGAGCAATGCTGGATCAGCTTTAATGGCTAACCGCTACGTCTTAACCGGGGCTTCCTGGGTTAGCCAGACATTTCAACGAGTCGCAAAAGCTGCTGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGAGGATCAAGGGAAACATGTGGGAAATTCCTCTTAA

Protein sequence

MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS

Homology

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BLAST of IVF0019528 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.1e-59
Identity = 134/246 (54.47%), Postives = 181/246 (73.58%), Query Frame = 0


Query: 4   RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSG 63
           R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+ +GAET++LLSG
Sbjct: 6   RSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS-NEHS--AYVTFKETQGAETAVLLSG 65

Query: 64  ATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM 123
           A+I DQ V I  AP+Y               S PA  +  + ++ A S +QK EDVVSSM
Sbjct: 66  ASIADQSVIIELAPNY---------------SPPAAPHAETQSSGAESVVQKAEDVVSSM 125

Query: 124 LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMD 183
           LAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D
Sbjct: 126 LAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVD 185

Query: 184 EKFQVSEKTKA-------AVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKE 243
           + FQV+E+TK+        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKE
Sbjct: 186 QNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKE 233

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BLAST of IVF0019528 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06
Identity = 54/192 (28.12%), Postives = 85/192 (44.27%), Query Frame = 0


Query: 6   VRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGAT 65
           V VTN+S   TEK + DFFSF G++  +      E +Q A + F+ P   +T++LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDAL 64

Query: 66  IVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTED-----VV 125
           +    + I+S         D  A            +TT      G    + ED     ++
Sbjct: 65  LGQNKIQITSE--------DGGAA-----------STTDQGGAGGDQAARQEDKPRSAII 124

Query: 126 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKV 185
           S +L++G+ L    L K+   D+ + ++S     + S      LS   SV     V EK 
Sbjct: 125 SELLSRGYHLSDVTLEKSIQLDQSYGVSSKFKGILES-----ALSGVRSVNERYHVTEKA 171

Query: 186 REMDEKFQVSEK 192
            E+D KF +S+K
Sbjct: 185 NEVDNKFAISDK 171

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BLAST of IVF0019528 vs. ExPASy TrEMBL
Match: A0A5A7TN24 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00080 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.0e-125
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120
           LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR
Sbjct: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180

Query: 181 EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA 240
           EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA
Sbjct: 181 EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA 240

Query: 241 EEDQGKHVGNSS 253
           EEDQGKHVGNSS
Sbjct: 241 EEDQGKHVGNSS 252

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BLAST of IVF0019528 vs. ExPASy TrEMBL
Match: A0A0A0LRG1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G437070 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.6e-121
Identity = 245/253 (96.84%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKD KGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSIL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTT-TTAGSAIQKTEDV 120
           LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+DNTTSTT +TAGSA+QK EDV
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDV 120

Query: 121 VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV 180
           VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV
Sbjct: 121 VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV 180

Query: 181 REMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 240
           REMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL
Sbjct: 181 REMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 240

Query: 241 AEEDQGKHVGNSS 253
           AEEDQGKHVGNSS
Sbjct: 241 AEEDQGKHVGNSS 253

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BLAST of IVF0019528 vs. ExPASy TrEMBL
Match: A0A1S4E2B3 (binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498392 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 5.0e-113
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 24  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPA 83
           FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPA
Sbjct: 62  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPA 121

Query: 84  VDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDE 143
           VDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDE
Sbjct: 122 VDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDE 181

Query: 144 RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL 203
           RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL
Sbjct: 182 RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL 241

Query: 204 MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS 253
           MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Sbjct: 242 MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS 290

[Close]

BLAST of IVF0019528 vs. ExPASy TrEMBL
Match: A0A1S3CAU8 (binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498392 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 9.2e-107
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 35  MRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPV 94
           MRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPV
Sbjct: 1   MRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPAVDASAPVAVPV 60

Query: 95  STPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSK 154
           STPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSK
Sbjct: 61  STPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSK 120

Query: 155 VASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGAS 214
           VASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGAS
Sbjct: 121 VASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGAS 180

Query: 215 WVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS 253
           WVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Sbjct: 181 WVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS 218

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BLAST of IVF0019528 vs. ExPASy TrEMBL
Match: A0A6J1JGG3 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484286 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.7e-100
Identity = 212/254 (83.46%), Postives = 224/254 (88.19%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           MA RTVRVTNVSL ATEK+LR+FFSFSGEIEFVEMR DNE+ Q+AFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDN-------TTSTTTTAGSAI 120
           LSGATIVDQP+SI SAPDYNLPAV AS P A   S PA +N       T  TT T GSA+
Sbjct: 61  LSGATIVDQPISIVSAPDYNLPAVAASDPPA--ASAPAAENTGAETAETAGTTGTTGSAM 120

Query: 121 QKTEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTT 180
           QK EDVVSSMLAKGF LGKDALN+AKSFDERHQLT TASSKVASLDQKIGLSEKISVGTT
Sbjct: 121 QKAEDVVSSMLAKGFILGKDALNRAKSFDERHQLTWTASSKVASLDQKIGLSEKISVGTT 180

Query: 181 VVNEKVREMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQK 240
           VVNEKVREMDEKFQVSEKTKAAV+NAGSA+M NRYV TGASWVSQTFQRVAKAAVDVSQK
Sbjct: 181 VVNEKVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQK 240

Query: 241 TKEKVLAEEDQGKH 248
           TKEK+LAE+ QGKH
Sbjct: 241 TKEKMLAEDQQGKH 252

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BLAST of IVF0019528 vs. NCBI nr
Match: KAA0042981.1 (binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa] >TYK11107.1 binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 462 bits (1189), Expect = 1.98e-163
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120
           LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR
Sbjct: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180

Query: 181 EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA 240
           EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA
Sbjct: 181 EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA 240

Query: 241 EEDQGKHVGNSS 252
           EEDQGKHVGNSS
Sbjct: 241 EEDQGKHVGNSS 252

[Close]

BLAST of IVF0019528 vs. NCBI nr
Match: XP_004148092.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN63397.1 hypothetical protein Csa_022121 [Cucumis sativus])

HSP 1 Score: 447 bits (1149), Expect = 2.57e-157
Identity = 245/253 (96.84%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKD KGAETSIL
Sbjct: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSIL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTT-TTAGSAIQKTEDV 120
           LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPA+DNTTSTT +TAGSA+QK EDV
Sbjct: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDV 120

Query: 121 VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV 180
           VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV
Sbjct: 121 VSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV 180

Query: 181 REMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 240
           REMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL
Sbjct: 181 REMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 240

Query: 241 AEEDQGKHVGNSS 252
           AEEDQGKHVGNSS
Sbjct: 241 AEEDQGKHVGNSS 253

[Close]

BLAST of IVF0019528 vs. NCBI nr
Match: XP_038900617.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 428 bits (1101), Expect = 4.92e-150
Identity = 235/252 (93.25%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           MA RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKDPKGAETSIL
Sbjct: 1   MAMRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSIL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120
           LSGATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT S T+TAGSA+QK EDVV
Sbjct: 61  LSGATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR
Sbjct: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180

Query: 181 EMDEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLA 240
           EMDEKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL 
Sbjct: 181 EMDEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLV 240

Query: 241 EEDQGKHVGNSS 252
           E DQGKHVGNSS
Sbjct: 241 E-DQGKHVGNSS 251

[Close]

BLAST of IVF0019528 vs. NCBI nr
Match: XP_038900618.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 426 bits (1094), Expect = 5.34e-149
Identity = 233/249 (93.57%), Postives = 239/249 (95.98%), Query Frame = 0


Query: 4   RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSG 63
           RTVRVTNVSLS TEKDLRDFFSFSGEIEFVEMR D ERSQLAFVTFKDPKGAETSILLSG
Sbjct: 2   RTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLSG 61

Query: 64  ATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM 123
           ATIVDQPVSI+SAPDYNLPAV+ASAPVA+PVSTPA DNT S T+TAGSA+QK EDVVSSM
Sbjct: 62  ATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSSM 121

Query: 124 LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMD 183
           LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMD
Sbjct: 122 LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMD 181

Query: 184 EKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEED 243
           EKFQVSEKTKAAVSNAGSA+M NRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVL E D
Sbjct: 182 EKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVE-D 241

Query: 244 QGKHVGNSS 252
           QGKHVGNSS
Sbjct: 242 QGKHVGNSS 249

[Close]

BLAST of IVF0019528 vs. NCBI nr
Match: XP_016902374.1 (PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 421 bits (1081), Expect = 2.21e-146
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 24  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPA 83
           FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPA
Sbjct: 62  FSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSGATIVDQPVSISSAPDYNLPA 121

Query: 84  VDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDE 143
           VDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDE
Sbjct: 122 VDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSMLAKGFTLGKDALNKAKSFDE 181

Query: 144 RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL 203
           RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL
Sbjct: 182 RHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMDEKFQVSEKTKAAVSNAGSAL 241

Query: 204 MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS 252
           MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS
Sbjct: 242 MANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEEDQGKHVGNSS 290

[Close]

BLAST of IVF0019528 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 257.7 bits (657), Expect = 9.8e-69
Identity = 150/256 (58.59%), Postives = 193/256 (75.39%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           M   TV+V+NVSL AT++DL++FFSFSG+I ++E +++ ER++LA+VTFKD +GAET++L
Sbjct: 1   MTMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120
           LSGATIVD  V +S APDY L      +P A+    P   N   +     S ++K EDVV
Sbjct: 61  LSGATIVDSSVIVSMAPDYQL------SPEALASLEPKDSN--KSPKAGDSVLRKAEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGF LGKDA+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKVR
Sbjct: 121 SSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVR 180

Query: 181 EMDEKFQVSEKTKAA-------VSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQK 240
           E+D+K+QVSEKTK+A       VSNAGSA+M NRYVLTGA+WV+  F +VAKAA +V QK
Sbjct: 181 EVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQK 240

Query: 241 TKEKV-LAEEDQGKHV 249
            KEKV +AEE+  + V
Sbjct: 241 AKEKVGMAEEEDKRKV 248

[Close]

BLAST of IVF0019528 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 254.6 bits (649), Expect = 8.3e-68
Identity = 145/252 (57.54%), Postives = 197/252 (78.17%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           M+  TV+V+NVSL ATE+DL++FFSFSG+I ++E +++N+ S+LA+VTFKD +GAET++L
Sbjct: 1   MSMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120
           L+G+TIVD  V+++ +PDY LP  DA A +    S    + ++S T    S  +K EDVV
Sbjct: 61  LTGSTIVDSSVTVTMSPDYQLPP-DALASIE---SLKESNKSSSPTREDVSVFRKAEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           S M++KGF LGKDA+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKV+
Sbjct: 121 SGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVK 180

Query: 181 EMDEKFQVSEKTKAA-------VSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQK 240
           E+D+KFQV+EKTK+A       VSNAGSA+M NRYVLTGA+WV+  F RV+KAA +V QK
Sbjct: 181 EVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQK 240

Query: 241 TKEKV-LAEEDQ 245
            KEKV LAEE++
Sbjct: 241 AKEKVGLAEEEE 248

[Close]

BLAST of IVF0019528 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-61
Identity = 134/246 (54.47%), Postives = 181/246 (73.58%), Query Frame = 0


Query: 4   RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSG 63
           R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+ +GAET++LLSG
Sbjct: 6   RSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHS--AYVTFKETQGAETAVLLSG 65

Query: 64  ATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM 123
           A+I DQ V I  AP+Y               S PA  +  + ++ A S +QK EDVVSSM
Sbjct: 66  ASIADQSVIIELAPNY---------------SPPAAPHAETQSSGAESVVQKAEDVVSSM 125

Query: 124 LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMD 183
           LAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D
Sbjct: 126 LAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVD 185

Query: 184 EKFQVSEKTKA-------AVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKE 243
           + FQV+E+TK+        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKE
Sbjct: 186 QNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKE 234

[Close]

BLAST of IVF0019528 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 )

HSP 1 Score: 233.0 bits (593), Expect = 2.6e-61
Identity = 136/249 (54.62%), Postives = 183/249 (73.49%), Query Frame = 0


Query: 1   MATRTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSIL 60
           MA R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+ +GAET++L
Sbjct: 1   MAVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS-NEHS--AYVTFKETQGAETAVL 60

Query: 61  LSGATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVV 120
           LSGA+I DQ V I  AP+Y               S PA  +  + ++ A S +QK EDVV
Sbjct: 61  LSGASIADQSVIIELAPNY---------------SPPAAPHAETQSSGAESVVQKAEDVV 120

Query: 121 SSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVR 180
           SSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++
Sbjct: 121 SSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIK 180

Query: 181 EMDEKFQVSEKTKA-------AVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQK 240
            +D+ FQV+E+TK+        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QK
Sbjct: 181 AVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQK 231

Query: 241 TKEKVLAEE 243
           TKEKV AE+
Sbjct: 241 TKEKVEAEQ 231

[Close]

BLAST of IVF0019528 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 229.9 bits (585), Expect = 2.2e-60
Identity = 134/246 (54.47%), Postives = 181/246 (73.58%), Query Frame = 0


Query: 4   RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSG 63
           R+V+V N+S  ATE D+++FFSFSGE+E +++++ NE S  A+VTFK+ +GAET++LLSG
Sbjct: 6   RSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS-NEHS--AYVTFKETQGAETAVLLSG 65

Query: 64  ATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTSTTTTAGSAIQKTEDVVSSM 123
           A+I DQ V I  AP+Y               S PA  +  + ++ A S +QK EDVVSSM
Sbjct: 66  ASIADQSVIIELAPNY---------------SPPAAPHAETQSSGAESVVQKAEDVVSSM 125

Query: 124 LAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREMD 183
           LAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK++ +D
Sbjct: 126 LAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVD 185

Query: 184 EKFQVSEKTKA-------AVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKE 243
           + FQV+E+TK+        VS+AGSA+M NRYVLTG SW +  F RVA+AA +V QKTKE
Sbjct: 186 QNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKE 233

The following BLAST results are available for this feature:

BLAST of IVF0019528 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	3.1e-59	54.47	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	1.8e-06	28.13	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of IVF0019528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TN24	2.0e-125	100.00	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LRG1	8.6e-121	96.84	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G437070 PE=4 SV...	[more]
A0A1S4E2B3	5.0e-113	100.00	binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034983...	[more]
A0A1S3CAU8	9.2e-107	100.00	binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034983...	[more]
A0A6J1JGG3	3.7e-100	83.46	binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of IVF0019528 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042981.1	1.98e-163	100.00	binding partner of ACD11 1-like isoform X1 [Cucumis melo var. makuwa] >TYK11107....	[more]
XP_004148092.1	2.57e-157	96.84	binding partner of ACD11 1 [Cucumis sativus] >KGN63397.1 hypothetical protein Cs...	[more]
XP_038900617.1	4.92e-150	93.25	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]
XP_038900618.1	5.34e-149	93.57	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_016902374.1	2.21e-146	100.00	PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]	[more]

BLAST of IVF0019528 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	9.8e-69	58.59	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	8.3e-68	57.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	1.2e-61	54.47	binding partner of acd11 1	[more]
AT5G16840.3	2.6e-61	54.62	binding partner of acd11 1	[more]
AT5G16840.1	2.2e-60	54.47	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..74 e-value: 1.8E-10 score: 50.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 6..66 e-value: 7.1E-9 score: 35.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..78 score: 12.833221
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..80 e-value: 7.3E-12 score: 47.2
None	No IPR available	PANTHER	PTHR32343:SF37	BINDING PARTNER OF ACD11 1	coord: 1..247
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..247
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0019528.2	IVF0019528.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding